Triplophysa rosa: 130565783
Help
Entry
130565783 CDS
T09216
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit B-like isoform X1
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tros03021
]
130565783
Transcription machinery [BR:
tros03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
130565783
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rrn7_cyclin_C
Rrn7_cyclin_N
Zn_ribbon_RRN7
DUF1651
TYW3
DUF5816
Motif
Other DBs
NCBI-GeneID:
130565783
NCBI-ProteinID:
XP_057208832
LinkDB
All DBs
Position
LG15:9527380..9532854
Genome browser
AA seq
572 aa
AA seq
DB search
MDEYLTDGYSEPCAQCAAVDWGVSNEGQFFCKNCYNVTEKMREVTDEFTLYIKNSRISRI
AKPMKTEKKCAREWMVCEGFQVVLKCQADALVSLGVCLQFKTEVLWNFWTRYLQNTRQAF
VSNPISTVDQNSESESETESVVCSEYSFWNGAPSEAGEVKDSGSSTGGRSGSLDALSYSH
RVDRKTYNVMTMPRTLALCYLALLWVREAITLADLLRLVKERHVPYLNIHDNFPEDMKLF
GRDSLIFRVDSIPSYSTVHKEAVDLAQVMKLPAFPMVSQDCLLHPIPLTVRYLLESNLPD
GLLVWVHKVIDEASMGDDSFLTFDPVKQKPALVCYDIQAAAVIIVTMKLLFKLDDRVEWT
SSGKAASEKKKKVFNVERWYKVMQPAFERARQKMEREEARQLWKSHKPFITSLKDKSLVF
KKRRVVNHLQHRFQKLTDSTPEQQCFTTTAFSSFHFHWGKEQGSDGPSLHQHRLHCTFKK
KGVKRLTNRKYWHTVLSVCPPTCSNHFSEIEASLPRMYVWLLDLFSFLLGVSQAQVHKEV
LNVERCLMERELLSVSKETPSPKKRTKKPRKI
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atggacgaatatctcactgatggatacagtgagccatgcgctcagtgcgctgctgttgac
tggggagtttcaaacgagggacagttcttctgcaaaaactgttacaatgtgaccgagaaa
atgagagaggtgacggacgaattcaccctttacataaagaacagcaggatctcaaggatt
gcaaaacccatgaaaactgaaaagaaatgtgcacgagagtggatggtctgtgagggtttt
caggtcgttctgaaatgccaggctgatgctttggttagtcttggtgtttgtttgcagttt
aagacagaagtattgtggaatttctggacgagatacctacagaacaccaggcaagctttc
gtcagcaacccgatttccactgtggatcaaaactctgagtcggagagtgagacagagtct
gtggtctgttctgagtattcattttggaatggggctccttcagaggcaggagaggtgaaa
gactcaggcagctccactggtggacggtcaggctctttggatgctttgtcatacagtcac
agggtagacaggaaaacctataatgttatgaccatgccacggacactagccctgtgctat
ctggctctgctgtgggtgcgagaggccatcactctggctgatttactgaggctggtgaaa
gagagacatgttccatacttaaacattcatgacaattttccagaagatatgaaacttttt
gggagagattctctaatctttcgagtggactccataccttcatactcaacggtccacaaa
gaagctgtagatctggctcaggttatgaaattgcctgccttcccaatggtctctcaagat
tgcttgctccacccaattccacttactgtccgctatctgctggaatccaacctacctgat
gggcttcttgtttgggtccacaaggttatagatgaagcttcaatgggagatgactccttc
ctgacctttgaccctgtcaagcagaagcctgctctcgtatgctatgacattcaggcagca
gctgtcattattgtcaccatgaagctccttttcaagttggatgatcgggtggagtggact
tcatctgggaaagcagccagtgagaagaaaaagaaagtgttcaatgtagaaaggtggtat
aaagtaatgcagcctgcctttgagcgagctcgacagaagatggaacgagaagaagcccga
caactatggaaatcccacaaacctttcatcacatctctaaaagacaagagtttggttttc
aaaaagagacgtgtggttaatcatctgcagcacagatttcagaagttaactgactccact
ccagaacaacagtgtttcaccacaaccgctttctccagctttcacttccactggggaaaa
gaacagggttcagacggtcccagtttgcatcaacaccggctgcactgtaccttcaagaaa
aaaggggtcaagaggcttaccaaccgaaaatactggcatacagttctaagtgtctgccca
cctacttgtagcaatcatttctcagaaattgaggccagcctgcccaggatgtacgtgtgg
ctccttgatctcttctcatttctgctgggggtcagtcaagcacaagtccacaaagaggtc
ctcaacgtagaacgatgcttaatggagagagaacttctgtctgtgtctaaagagactcct
tcccccaaaaaacggacaaaaaaacctagaaaaatctaa
DBGET
integrated database retrieval system
