Triplophysa rosa: 130565888
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Entry
130565888 CDS
T09216
Symbol
arhgef28a
Name
(RefSeq) rho guanine nucleotide exchange factor 28 isoform X1
KO
K21072
A-kinase anchor protein 28
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tros04131
]
130565888 (arhgef28a)
Membrane trafficking [BR:
tros04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
130565888 (arhgef28a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_16
RhoGEF
C1_1
PH
C1_2
SOS1_NGEF_PH
PHD
Prok-RING_1
PH_13
DUF2205
DUF7588
Motif
Other DBs
NCBI-GeneID:
130565888
NCBI-ProteinID:
XP_057209004
LinkDB
All DBs
Position
LG2:20763556..20832630
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AA seq
1806 aa
AA seq
DB search
MELSRVEVPLYGQVEVCGKLQESQCVQEETDYYVVLVGSSLHHVTPAHRTEDHGSLKFTV
PGHDVPEKVSLKFYSCTRSSSNFPISPLSHSQELFLEYIQDEAQEVAEQLMTSDPLTSSN
HEDILRKYCPENEISSQQNHLDKTGQHETDGISDPKELFQSKIPDETKQGLCVCDQGNYS
LREGTRTSEVAEHKCTAGQHNAFDKKTTQALANLHFLEWDGQTRRVNQDLQTLLHTVGCL
GFSHLCHFLLQTSEGQGMVPTVSVEESSSLTLAEKHRDSMLISALTNISKPVWMCQVWTD
GSHQLRFCPVTEWVCLSVKHCTQIDAQSSIQLYRDQCRDTETLTRVRRLRESSEGSTRIS
DLFDRDQNSPLVPEDRTLVDSVFEEQLVLCLDEEEDDLNTFYTEMCSSPGSCTPFQLHSS
DAASVRLAAMLRSSTKDDDFNLKYSVPGVTEDSSGTDSGMWQMSGVLPPGATDTPPLIKD
EEGRKGRSPASRAFSPTSPAGLMLDRLMRTTRPAELSCNTSNSPTESCDLSPSLVALEMD
SEEDDDDDMLMKKPLPQPALELKNNGDERMKYNPTPDLTCTRSHSASSASNPAPAKDVEQ
GIRLRSYSYTSPKISLLPPRFSRDAQPPPTDLNQDGALSSSSGSRSLLQALSLSKSLSLL
NPVKHRASSTSEQAQEKRELRFRRRAQSADDETSTELADSLQHLTLSEFLKEIEEEEWDK
YIIPSKTESEKYKVSRTFSFIKSRMYSTRNKNKGKGKERETKDKLVNGHQFSAGSVLGST
LCEICGKPASGKDVLHCTYCAVSVHKGCKDSTTPCQKKPHDKYSVMAVKSRTASLPQNFT
VRESSSSSSQVSPSASLPVMTSRDSTPLPCPLSRSVPAVTERLSESPDADSDSSPWRNHI
QPEDLLQTLESSTSTDSSLIEDSVDSPLQTELMMNAVDLEAESWSLSVEPQFCRMQEKRI
IKRQDVIYEFMQTELHHVQTLMIMAEVFRQGMREEVGLDADTINRIFPCLDELLLLHRDF
LSAMRERRQSCVQPNSNKNYLIHRVGDIFLQQFSQENAEKMKQVYGEFCSHHTEAVSFFK
ELQQQNKRFQLFIKQQSSNSLVRRREIPECILLVTQRITKYPVLLERILQYTEEEEEHAD
LSRVLVLIRELISAVDQSVSQYEQHQRLSEVLGRMENKCSAKLKSGHTFRKQDITSGRAL
LHQGPLLWKTATGRLKDVLALLLSDSLVFLQEKDQKYIFAAVDQKPPVISLQKLIVREVA
NEERGMFLISASSAGPEMYEVHGASKDERNTWMRLIREAVENCPEEEEETTSESEEERRV
AEAKVQKIHRLQESLCGHDQLICANLEEKLHIYAELSVMVGHREAGPDPRLLVRPSTEDI
PQAAVLLNAALKEAENLKAALSSHCASLPSLSDTEDQVQHEPCTSSSSLEVQSPLTDTSQ
CEEEELRGEEGVEAQGLNLSTTAQLQVSQSVQSLTQLLYSLQAAVTIQDSSYEVQRLLLL
LLSSPSPHPHSRPFPITRSNQALQEQERQREAERRREELADVARVRSAMVRERQQWEREC
QARQVQQRETELALEGRELLCHLEERRIQSERQELQEQLQEYQQSLERLREGQRSVEKEK
EKLDTQRRLLESLKHESQHNLVIPLDGQQTQDAGHLCGEDEHGSIFVNEAAFMSPSLNNR
HVHLHHSHPHHQTTHPHSGSLGLSDSPSAQNSLNSLLARSNHRGSSVGVSEESWTGGILY
TGPLRSQGTESPSNDEGQLSHGPESWCAGVTGTGLYQDDVLLVNQPFDTMETENRDADGE
ENIVYL
NT seq
5421 nt
NT seq
+upstream
nt +downstream
nt
atggagctcagcagggtagaggtgccactttatggtcaagtggaagtctgcggtaagctg
caggagtctcagtgtgttcaggaggaaactgattactatgtggtcctcgtgggctcgtcc
cttcaccatgtgaccccagcccacagaactgaggaccacggctcactgaaattcactgtt
ccgggtcatgatgttccagagaaagtgtctttgaagttctacagctgtacgaggtccagc
agtaattttcccatcagccccctctcccattcacaagagctgtttctggagtacatacaa
gatgaggctcaagaggtggcggagcaactgatgacctctgatcccttgacctccagtaac
catgaggacatcctaaggaaatactgcccggagaacgaaatctcatctcaacagaatcat
ttagataagactggacagcatgagacggatgggatttctgatccgaaggaattatttcaa
tctaaaataccagatgagacaaaacaggggctatgtgtttgtgatcagggaaattacagc
ctgagagaaggtacaagaacttctgaggttgcagagcacaaatgcacagcgggacaacac
aatgcttttgataaaaaaaccacacaggccctggctaacttgcactttctggaatgggac
ggccaaactagacgggtgaatcaagatcttcagactcttcttcacacggtcggatgttta
gggttttcccacctctgccacttcctcctccagacgtctgaaggtcaggggatggttccc
acagtcagcgtggaagaatcaagttctcttacactggctgaaaagcacagagactcgatg
ctcatcagcgctttaacaaatatctccaagcccgtgtggatgtgtcaggtctggaccgac
ggttcgcaccagctccgtttctgtcctgtcacggaatgggtttgcctgtctgtcaaacac
tgcacacaaatagatgcacaaagcagcatccagctgtacagagaccagtgcagagataca
gagacgctcacacgggtaaggcgtctgagggagtcgtctgaagggagcacacgcatatct
gatttatttgacagagatcagaacagcccgctggtacctgaagaccgtaccctggtggat
agtgtctttgaagaacagcttgttctttgtcttgatgaagaggaagacgatctaaacacg
ttttacacagagatgtgttcctctcctggctcctgcactccgtttcaacttcattcctca
gacgctgcctccgtcagactcgcagcaatgcttagaagctccactaaggatgatgacttc
aatctgaagtactctgttcctggagtcacagaggacagctctgggacagatagtgggatg
tggcaaatgtcaggggtcctgccaccaggggcaacagatacgcctccacttattaaagat
gaagaagggcgaaagggaaggtctcctgcctctcgtgccttctccccaacgtctccagct
ggattgatgctggatagactcatgcggaccacccgacccgctgaactgtcctgtaacact
tcaaactcgcctacagagtcatgtgacctgagcccgagtttggtggccttggaaatggac
agtgaagaggatgacgatgacgacatgttaatgaagaagcctcttccccagccagccctc
gagctcaaaaacaacggagacgaacgtatgaaatacaaccccacccctgatcttacctgc
actcgttctcactccgcctcctctgcatctaaccccgcccctgcaaaggacgttgagcaa
ggtatccgtcttcgttcatattcctacacctctcccaaaatcagcctgctgcctccacga
ttcagtagggatgcccagcctccacccaccgacctcaaccaggatggcgccctctccagc
agcagtggcagcaggtctctcctacaggcactgtctctgtctaaatctctctctcttctc
aaccctgttaaacatcgcgccagcagcacatcagagcaagctcaagagaaaagggagtta
aggtttcgtagacgtgctcagtcggctgatgatgagaccagcacagaactggctgactcc
ctccaacacctcacgctctccgaattcctcaaagagatcgaggaagaggaatgggacaaa
tatatcatcccttccaaaaccgaatcggaaaaatacaaagtcagccgcacgttcagcttc
atcaagagccggatgtacagcactcgcaacaagaacaaggggaaagggaaggagagagaa
accaaagacaagctggtaaatggacaccagttctcagcaggatctgtcctggggtcgaca
ctttgtgagatctgcggaaagccagcttctggtaaagacgtcctccactgcacatactgt
gcagtgagtgtccataagggctgtaaagactcgactacgccatgccagaagaaaccacat
gacaaatattcagtaatggcagtgaagagcaggacagcctctcttcctcaaaatttcaca
gtgcgtgaaagttcctcctcgtcctctcaggtgtccccctctgcctctcttcctgtgatg
acatcgcgagactccacccctcttccctgtcccctgtccagaagtgtgcctgcagtcact
gaaaggcttagtgagagcccagatgcggatagtgactcctccccctggcgaaaccacatc
caaccggaggatctccttcaaacgttggagtcttcaacatctacagattcatctctcatt
gaagactcggttgactctccgctgcagacagagctaatgatgaacgctgtggatttggag
gcggagtcatggagcctttcggtggagcctcagttctgtaggatgcaagaaaaacgcatc
atcaagagacaggatgtcatttacgagttcatgcagactgaactccatcacgttcagacc
ctcatgataatggcggaggtcttcaggcagggaatgcgggaagaagtcggactggatgcg
gacactattaatcggattttcccgtgtttggatgagttactcctgctgcaccgtgacttc
ctgtcagcgatgagggaacggcggcagagctgtgtccagcccaacagcaacaagaactac
ctcattcaccgtgtgggggacatttttctgcaacagttctcccaggagaatgcagaaaag
atgaaacaggtgtatggcgaattttgcagtcaccacacagaagcggtcagtttctttaaa
gagcttcagcaacagaacaagagattccagctgttcatcaaacaacagagtagcaactca
ttagtaaggagacgagagatccccgaatgcattttgttagtgacgcagcgaatcacaaag
taccctgtcctcctggagagaatactgcagtacacagaggaggaagaagaacatgctgac
ctgtctcgtgtgctagtcctgatccgagagctgatctcagctgtggatcagagtgtgagt
cagtatgagcaacaccagagactgagcgaagtgttgggtcgtatggagaataaatgctcg
gccaagctgaagagcggccacaccttccgcaagcaggacatcaccagcggcagggctctg
ctgcaccagggccctctgctctggaagacggccacaggaaggttaaaagatgtgctggca
cttttgctgtcagattcattggtgttccttcaggaaaaagatcagaagtacatctttgct
gctgtggaccagaagcctccagtgatctccctgcagaagctgatcgtgcgagaggtggcc
aacgaagagagaggcatgtttctgatcagtgcctcttcggctgggcctgagatgtacgag
gtgcacggtgcctctaaagatgaacgcaacacctggatgagactcatcagggaagctgtg
gagaattgccctgaagaggaggaagaaaccacaagcgagtccgaagaggaaagaagagtt
gctgaagcaaaagtccaaaaaatccacaggctgcaagagtctctgtgtggccacgatcag
ttgatctgcgccaatctggaggagaaactgcacatctacgccgagctgtcggtcatggtt
ggccaccgtgaagcaggaccagaccccaggctgctggtacgacccagtactgaagatatt
cctcaggctgcagtgctgctcaacgctgctcttaaagaggcggagaacttgaaagcagct
ctctcctcccactgcgcttctcttcctagtctgtctgatacagaggaccaggtccaacat
gaaccctgcacctcctcctcatctcttgaggtccagagccctctgactgacacctcacag
tgtgaggaagaggagctcagaggagaggaaggtgtggaagcacaaggccttaatctcagt
acaaccgctcaattacaggtgagtcagagcgtccagagtttgactcagctgctgtacagt
ctacaggctgcagtcactatccaagacagtagctatgaagtccaaaggctcctcctcctt
ctgttatcaagcccgtcccctcatccacattcccggccgtttcccatcactcgcagcaac
caggccctgcaggagcaggagcggcagagggaggcagagcgtcggcgggaggagctggca
gacgtggcccgtgtccggagcgccatggtgcgggaacgccagcagtgggagcgggagtgc
caggcgcgacaggttcaacagagagagacggagttggcgttggaaggaagggaacttttg
tgccacctagaggagcggaggatacagagcgagcgacaggaactccaggagcagctgcag
gagtaccagcagagcctggagaggctgagagaaggacagaggagcgtggagaaggagaaa
gaaaaactggacactcaacgcaggctgctcgagagtttaaagcacgaatcacagcataat
ctggtcataccgctcgatggacagcagacacaggacgctggtcacctgtgtggcgaggac
gagcatggatccattttcgtgaacgaggcagcgtttatgtctccctctttaaacaacaga
cacgtccaccttcatcattcacaccctcatcatcagacgacccatccgcattcaggatcc
ttaggattatccgactctcccagtgctcagaacagtctcaattcactgctggcccgatcg
aatcacagaggcagctctgttggagtgtcagaagagagctggactggaggcatattgtac
acgggcccgctgagaagtcaaggaacagagagtccaagcaatgatgagggtcagctcagt
cacggcccagaatcttggtgtgcaggagtcacagggacagggctttatcaagatgacgtc
ctcctcgtgaaccagccctttgataccatggagacagagaacagagatgctgatggagag
gagaatattgtgtatctctga
DBGET
integrated database retrieval system
