Triplophysa rosa: 130565954
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Entry
130565954 CDS
T09216
Symbol
rev3l
Name
(RefSeq) DNA polymerase zeta catalytic subunit isoform X1
KO
K02350
DNA polymerase zeta [EC:
2.7.7.7
]
Organism
tros
Triplophysa rosa
Pathway
tros03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
130565954 (rev3l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tros03400
]
130565954 (rev3l)
Enzymes [BR:
tros01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
130565954 (rev3l)
DNA repair and recombination proteins [BR:
tros03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
B-family DNA polymerases
130565954 (rev3l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4683
DNA_pol_B
POL3_N
REV3_N
DNA_pol_B_exo1
zf-C4pol
Motif
Other DBs
NCBI-GeneID:
130565954
NCBI-ProteinID:
XP_057209109
LinkDB
All DBs
Position
LG15:complement(20254352..20324376)
Genome browser
AA seq
3013 aa
AA seq
DB search
MFSVRVVTADYYLSSPIRDLDVCYSDFRDSDVKKVPVVRIFGSTPAGQKTCLHLHGVFPY
IYVPYDGFGQQANRYLRQVAYSIDRALNVSMGNPSSNTQHIFKVSLVSGMPFYGFHMKEK
AFMKIYLYNPHMVKRVCELLQGGAVMNKSFQPHEAHIPYLLQLFIDYNIYGMNMINLAAV
KFRKSHATVGEESSSKVDSTIPWKSPCTSKLNDSVLRDTMSTRWGEDNIPSSLILEEVER
MSVCELEVDAVAADVLNRLEIENQIGRNPGLQAIWEDEKQRHRERSESSLIDVPESQDRG
FVEFAESERILMKRFKEILTENEFDVTQAGSEVDANEDSFPDLSLHPVVLTPDDLPSIPA
SQVDVHHDAIKEMKRPDSKHAEVAVVDEEAILNLLENSHTFLPLSQNSNQSAILDGIQDQ
PMLDLLEELTDFGAVNQQCLSGSGICNSDDEEAGPELEKEEAELSIIMSQRWDNEITEHS
ARQRLCMKEANESSSDEQQASSDEEMDWKGNASFPADLSIPQLDGAADENSDSSLTDKGS
MTHSSLKVTDKILGSRNVFPNGAFLSETPSSAKIVLEYKCAERRLQEESSENHLKNKQTN
ECSTGLRVNKEITYITPVKHPIPCNIANISQIGGDKIGVHPSYTNENKATGLNQSEPDGL
MFGNSKLVQCRKKYGSIKNVERNHISIMENHRGFSVCYSELINCPTNTDIELSPKDCRNS
VIRSFDQTPSPMGESQSLAPQEGETGQGSKEGDVGELKIRYEDYQENKTERTVVAQQEAH
YKFFPSVVLSNCLSRPVKKTIWGKTGEGCCTMEDPEQRRSRLKLTTKKRTTLSQKGTSPL
RTPATIKEEAPPFSAITPDSLNEKETNSKVNMETSAPSSVKRSESSVEDELAVIPTKISR
TKVSSLPGSKYTLRTKRKMSRDTEDGDHLSSRSFKRSLVPNEGLKEKNHIQKKTRLSKKE
PPVIIKYIIINRFKGQKNMLVKIAKINADEPCTVLTPEKLEEYQKLAPPKDFWPKVSDST
AVKYPLPEPKVKKCPKRKLKVNLTSKRVSTSPKLKCDRARQTRRPRRVKAAFTLPKLLTP
WPCYNDFTDDHSTEYSDVMVELGYLSERAPSSSDSTPPRCWSPTDPLLESNSNDHLINPL
NDPCLGSPYQSLTPKPYKIGPRDRSRTSRPKKSSAASQKCQSSSIKKTSVSGSIKTGDSQ
KKSNRTASRRQKKNCKSIERTVLGDGTSTTQKSRKLNKKLFQGTENLSTEGTENSQTSLP
VDNSPLESSSDGLTPFQHPSSIKSIQEDATVSCFDSQTVSISTEKKPDQGIDFFEVFNVI
ASNKQEVQIALNPLTEKATKTLGHPCSVITYSRSNSISQSLGQNGPVTTDECYLNSEVTS
QEENPRTIQHSQSTAKTSMKSKRQSTKKKDSPMSLSEPVYFISSPSEKKAITDGSHRDLA
LSSIPKNGIICVPEMPSGLAVLKELLQKRQLKAGQTLQESVHVTDTTSSTSHPNDVSKTV
KRKRPPSLTTRKSRSARTKVPKESISRQSMKYKPGDLVRLDHLSDGSPVLMSDPGLDSCC
SIEDSLSPELPDNYNFDINAIGQTEFSCLYSGNQFVLTDKNLPQKFLSDVSQEAINALVE
GLGSRAQKIVEVDEDAKHEEGCHRSGTVSPELFDKSCENSKVFPNKISLPLFDSERISNK
DWGGSLGKINGLSHFQDFYCEKRDMLFDPEPFFSITSVSFGDNGVSPSSDLQDGSSATPN
SSPRSVSSLSQLRNGVQTSKSGGTHILKPLMSPPTREEILATLLDLDLSEATYQEPFCSD
PSDAPLKPREVGRRKLTLETRLANELAEFHGDISQQGLQFWKVAFSAMTNAGSAPTHDSR
ASLSTKNQKPSSGGDQKVIMLPCKSAPSRERVQLWLQAKKQYECLLRDRKLVGDPKCVEL
KHSTCDRTSPQKKHLETPDSKYCNKGPEKVSELQSDKRNGLSLPLCISPVKAASFNCSPK
SMMHFLDTKAKDQEVDVRGQVRSSCSPELPTWQESPAGLKEDEDKKDLCDRLPAPNMDES
HIYCTSPENVQPRDFLSPSPFHIQDRVSDDKTLYMLHSTPVLRRRRSIDDDGSNCSPTVN
DEMEARSQWLHQRSNKNKDALRRVLLTTQMKNQFTAMNVPKKESSQIEGPSICNSYGFKV
SMQNLQEAKALHELQHLTLMTMELHARTRRDLEPDPEFDPICALFYCLSSDSPLPSAITT
QMTGSIVIDKDYCSSGQASRSKAPLLFRSGVTGLQVTYARDEKQLFEEISNIMRKYDPDI
LVGYEVQMHSWGYLLQRAAALGVDLCQRLSRVPGDAKENRFLAEKDEYGADTMSELHIVG
RIVLNLWRVMKTEAALNNYSFENVAFHLLHQRFPLYSHRTLSDWFDHSTDVHRWKVVDHY
VSRVCGMIQLLQQQDIIGRTSELARVFGIQFYHVLTRGSQYRVESMMLRIAKPMNYVPVT
PSTQQRAQQRAAQCIPLVMEPESRFYSNSVVVLDFQSLYPSIVIAYNYCFSTCLGHIENL
GTCDEFKFGCTSLRVPPDLLYQLRNDITISPNGIAFVKPSVRKGVLPSMLEEILKTRIMV
KQSMKGCKNDKALFRLLNARQLGLKLIANVTFGYTSANFSGRMPSVEVGDSIVHKARETL
ERAIKMVNDTKKWGARVVYGDTDSMFVLLKGATKEQAFKIGNEIAEAVTATNPKPIKLKF
EKVYLPCVLQTKKRYVGYMYESLDQKNPVFDAKGIETVRRDGCPAVAKILERSLKQLFES
RDISVVKQYVQRQCVKVLESKASMQDLTFAKEYRGSGSYRPGACVPALELTRRMMAFDRR
LEPRVGERVPYVIVYGRPGVPLIQLVRRPLEVLQDPSLRLNATYYITKQILPPLARIFNL
IGVDVFSWYQELPRVQKVWSSGVFAGGEESTRKGTISQYFTTLHCPVCDELTQLGVCEHC
RAEPQLVAITLHQDLRLWESQQDQLLKVCRSCSGSAERQMPCITLDCPVLYKLSRVNRHL
SRGPYLRQLLEQF
NT seq
9042 nt
NT seq
+upstream
nt +downstream
nt
atgttctcggtgagagtcgtcacggcagattattacttgagcagccccatcagagacctg
gacgtgtgttattctgacttcagagacagcgatgttaagaaagtgcccgtggttcgaatc
tttgggtccacaccagcaggtcagaagacatgtcttcatctgcacggcgtgttcccatac
atctatgtgccgtacgatgggtttggacaacaggcaaatcgctacctgcggcaggtggcc
tacagcattgacagagccctgaatgtcagcatgggaaacccctcatctaacacccagcac
atctttaaagtgtctctggtctctggcatgcctttctatggattccatatgaaggaaaag
gcatttatgaagatttacctttacaaccctcatatggtcaaaagggtgtgtgaactcctg
cagggtggtgctgtgatgaataaaagttttcagccccatgaagctcatattccctatctg
ctgcagctgttcatcgactacaacatctacggcatgaacatgataaatctcgccgctgtc
aagtttcgaaagagtcatgcgacagtcggagaagagtcgtctagtaaagtggacagcacc
atcccatggaagagtccctgcacttccaaactcaatgacagtgttctgagggacacaatg
tccactcgctggggggaggacaacataccaagttctctgattttagaggaggtggaacgt
atgagtgtatgcgagctggaagttgatgctgtcgctgcggatgttctcaaccgactagag
attgagaatcagattgggagaaaccctggtcttcaggccatctgggaggatgagaaacag
cgtcaccgggagagaagtgaaagctctttaattgacgtgcctgagtcacaggatcgaggc
tttgtggagtttgcagaaagcgaaagaattctgatgaagagatttaaggaaattctaaca
gaaaatgaatttgacgtgactcaggctggttctgaagttgatgcgaatgaagattctttt
cctgacctttccctccatcctgtagtcctgaccccagatgatttgccctccatacctgct
agccaagtggatgttcaccacgatgcaattaaagaaatgaaacggcctgatagcaaacac
gctgaggtggcagttgttgatgaagaggccattttgaatttattagaaaacagtcatacc
ttcctccctctctcgcaaaactccaaccagtcagcaatactcgatggcattcaagaccag
cctatgctggatttgcttgaggaactgactgattttggagcagtgaaccagcaatgtttg
tctgggagtggcatctgtaacagtgatgatgaagaggcggggcctgaactagaaaaagaa
gaggcagagctcagtataatcatgtcacaaagatgggacaatgagattacagaacactcc
gccaggcaaagattatgtatgaaagaagcaaatgaaagctccagcgatgagcagcaggcc
tcatcggatgaggagatggattggaaaggaaacgcttcttttcctgctgatctgtctatt
ccacagttagacggggctgcagatgagaacagtgattcatcacttacagacaaaggatct
atgacacattcgtctctaaaagtaacagacaagatacttggtagcagaaatgtgtttcca
aatggagcttttctctcagagacaccatcctctgccaaaattgtccttgagtacaaatgt
gctgagcgaagacttcaagaggaatcatccgaaaaccacttaaaaaataaacagacaaat
gaatgttcaaccggattaagagttaataaagagattacatatatcacacctgttaaacac
ccaatcccttgcaacattgcaaatatatctcaaattggtggtgacaaaattggtgttcac
ccttcgtacaccaatgaaaataaggccaccggccttaaccaatctgaacctgatggttta
atgtttggaaactctaaacttgtacagtgcagaaaaaagtatggcagtattaaaaatgtg
gaaaggaaccacatctccatcatggagaatcacaggggcttctcagtatgttattcagag
ctgataaactgccccaccaatactgacatagagctgagtcctaaagactgcagaaattct
gtgataaggagttttgaccagacaccaagcccaatgggggagagccaatcattggcccct
caagaaggcgaaacaggacagggcagtaaagagggagatgttggtgaactgaaaataagg
tatgaagactaccaagagaataaaaccgagaggactgttgtggctcagcaggaggcacac
tataagttttttcctagtgtcgtcctctctaactgtctgtccagaccagtcaaaaaaacg
atctggggtaagactggtgagggctgctgtactatggaagatcctgagcagcggaggtca
agattaaagttgaccactaaaaagagaactacattaagtcaaaaagggacaagtcctttg
aggaccccagctactataaaagaggaagccccacccttctctgccatcactccagactct
ctcaatgaaaaggaaacgaatagtaaagtaaacatggaaacctcagctccttcaagtgtt
aaaagatctgagagctcggtagaggatgaacttgcagttattcccaccaaaatatctcgc
accaaggtgtccagtttgccaggtagcaaatataccttgcgaacaaaaaggaaaatgagc
cgtgacactgaagacggagatcatttaagttctcgttctttcaaacgatccttggtgcct
aatgaaggcctgaaagagaaaaaccacatccaaaaaaagacaagactctctaaaaaagag
ccaccagttatcatcaaatatataatcattaacaggttcaaaggtcagaagaacatgctt
gtgaagattgcgaaaattaatgcagatgaaccttgcacagttttaacaccagaaaagctt
gaagaataccaaaagcttgctcctcccaaagatttttggcccaaagtctcagactctaca
gcagtcaagtaccctctacctgagccaaaagtcaagaaatgccccaaacgaaaacttaag
gtcaatctaacatctaagagggtgagtacctctccaaagttgaaatgtgaccgagctaga
cagactagaagaccaaggcgtgttaaagcagcatttactttgcccaaattactcactccg
tggccttgttataatgattttactgatgatcactctacagagtactctgatgtaatggtg
gagttgggttatttgtctgaaagggctcctagttcttctgattcgacaccacctcgatgt
tggtcacctactgaccccttattggaatcaaattcaaatgatcatctcataaaccccctt
aatgatccatgtcttggttctccctatcagtcattgacccccaagccatacaaaataggc
cctcgagacagaagcagaacatccaggcctaaaaagagttctgctgcaagtcaaaaatgc
caaagtagtagcataaaaaaaacatcggtcagtggttctataaaaacaggggattcgcaa
aagaaaagtaatcgaacagcttcaaggagacaaaagaaaaattgtaaaagtattgaaagg
actgttcttggagatggcacatctacaactcaaaaaagcaggaagctgaacaaaaagctg
tttcaaggaactgaaaacttgtcaactgaaggaactgaaaactcacagacttcacttcca
gttgacaattcacctcttgaatcctcatctgacggcttaactccttttcagcaccccagt
tctataaaaagtattcaagaggatgctactgtcagttgttttgattcacaaacagtcagc
atcagcactgaaaaaaagccagatcagggtattgatttttttgaggtgtttaatgtcatt
gcctcaaataagcaagaggtgcagattgcccttaatcccttgactgaaaaagctacaaaa
actctcgggcatccatgttctgtcatcacttacagcagatctaattctatatcgcaaagc
ttaggtcaaaatggccctgtcacaacagatgaatgctatttaaattctgaggtcaccagc
caggaagagaacccgaggaccatacagcattcacagtcaactgcaaaaacgagcatgaaa
tcaaaaagacagtcaacaaaaaagaaagatagtccaatgtctctgtcagagcctgtttat
tttatatcctcaccttctgaaaagaaagcaattacagatggatctcatagagatctcgca
ttatcatccatccctaagaatggaataatatgtgtaccggaaatgccttctgggctggct
gtcctgaaggagcttctccagaagaggcaacttaaggcaggacaaacactacaggaaagt
gttcatgtgactgacactacgtcttccaccagtcatcccaatgatgtttccaaaacagtc
aaacgcaaaagacctccttcgttaacaacaaggaaatcaagatctgcaagaaccaaagtg
ccaaaggagtccataagcaggcaaagcatgaaatataaacctggagatttggtgagactt
gaccatctttcagatggcagtcctgtccttatgtctgaccctggccttgatagctgttgc
tccatcgaggatagcttatccccagagctcccagataattataactttgatattaatgcc
attggccagacagaattttcctgtctttattctggcaaccagtttgttttaactgacaag
aacttgcctcaaaagttcctcagtgatgtcagtcaagaggcaatcaatgcccttgttgaa
gggttgggaagcagggcacaaaaaattgttgaggttgatgaagatgccaaacatgaggag
ggctgccatcgatctggaactgttagtccagagctctttgacaaatcttgtgagaacagc
aaagtttttcccaataagatatctctgcccctgtttgattccgaaaggatctcgaacaaa
gattgggggggctccctcggtaaaattaatggcctcagccactttcaggacttttactgt
gaaaaaagagacatgctattcgacccagagccctttttttcaattacttctgtatctttt
ggggataatggtgtatccccaagtagcgatctccaagatggcagttcagcaaccccaaac
agttccccacggtctgtcagctcactgtcccaactgagaaatggagttcagacttcaaag
agtggaggaactcacattctcaaacctctcatgtcaccgcctactcgcgaagaaattttg
gctactctgttggatctggacctctcagaagccacctaccaggaaccgttctgcagtgac
ccatcagatgctcctttaaagccaagggaggttggcagacgcaaattgactttggaaacc
aggctagcaaacgaactggctgaatttcatggcgacatatctcagcagggcttgcagttt
tggaaggttgcattttctgccatgacaaatgctgggtctgccccaacccatgattctagg
gcttcgctatctaccaagaaccaaaagccatcttctggtggtgatcagaaggtgatcatg
cttccctgcaagagtgctccaagccgggaacgggtgcaactctggctgcaggccaaaaaa
caatatgagtgccttctgagggatagaaaactagtgggtgacccaaaatgtgtagagcta
aagcacagcacatgtgacaggacctcccctcagaagaaacacttggaaacacctgactca
aaatattgtaataaagggcctgaaaaggtttcagagttgcagagtgacaaaaggaatgga
ttgagtttaccactttgtatctcaccagttaaagcagcttcatttaactgtagccctaaa
agtatgatgcatttcttagacactaaggccaaagatcaggaggtggatgtaaggggtcag
gtcaggtcttcttgctcacctgagcttcctacatggcaggaaagccctgctggcttaaaa
gaagatgaagacaagaaggatttgtgtgatagattgcctgcccccaacatggatgagtct
catatctattgcacatcacctgaaaatgtacagccaagggacttcttgagtccatcccct
tttcatattcaagatcgagtttctgatgataaaaccttgtacatgctccacagcacacca
gttctcaggagaaggcgaagcattgatgatgatgggtctaactgcagtccaacagtgaat
gatgaaatggaggccagatcacagtggctacatcagaggagtaataaaaacaaagatgct
ttacgaagagttctgctaaccacacaaatgaagaatcagtttactgctatgaatgttcca
aagaaagagagttctcagattgaaggtccatcaatctgcaattcgtatggttttaaagtc
agcatgcagaacttgcaagaggcaaaagcattgcatgagttacagcacctcacactgatg
accatggagcttcacgcgaggactcgacgtgaccttgagcctgaccctgagtttgaccca
atttgtgccttattctactgcctcagttctgattcgcctcttcccagtgccatcaccaca
cagatgaccggctccattgtcattgacaaagattattgttcttcaggacaagcctcaagg
agcaaagcacccttgctgtttagatctggtgtaacaggattacaagtcacgtacgctcgt
gatgagaaacagctgtttgaggagatttctaacataatgagaaagtatgatccagacatc
ctggtgggctatgaggtccagatgcactcttggggataccttctgcaacgtgcagcagca
ctaggggtggacctgtgccagcggctttcccgtgtgccaggcgatgcaaaagagaatcgt
ttcttggcagagaaagatgaatatggggcagacaccatgagtgaactccatatagttggt
cgcattgtcctcaacctgtggagggttatgaagactgaggctgcattaaataactactcg
tttgagaatgtggcttttcacctcctccaccagcgctttcctctctatagtcatcgcacg
ctctctgactggtttgaccacagtacagacgtgcacaggtggaaggtggtggatcactac
gtaagccgtgtgtgtgggatgatccagttgctgcagcagcaggatattattggaaggaca
agcgagcttgcacgtgtgttcgggatccagttctatcatgtgcttaccaggggctcacag
taccgtgtggagtcaatgatgttgaggattgcaaagccgatgaattacgtcccagtgact
ccaagcacacaacagcgtgcccagcagagagcagcacaatgcatcccgctagtcatggag
ccagagtcgcgtttctatagcaactctgtcgttgtgttagatttccaatcgctgtatccc
tccatcgtcattgcctacaattactgtttctcaacctgccttggacacatagagaatctt
ggaacgtgtgatgagtttaagtttggttgtacgtctctcagagtgcctcctgacctcctt
taccagctcagaaatgacatcacgatttctcccaatggcattgcatttgttaagccgtca
gtacgaaagggtgtgctaccaagtatgctggaggagattttgaagaccaggattatggta
aagcagtccatgaaggggtgcaagaatgacaaagctctgttccgtctcctgaacgccagg
cagcttggccttaaacttattgctaatgtcacgtttggttacacctctgccaacttctca
ggacgaatgcccagtgttgaggttggtgacagcattgtgcacaaggctcgggagactttg
gaaagagccattaagatggtgaacgacaccaaaaagtggggagctcgtgtggtttatgga
gacacagacagcatgtttgtgttgttgaagggagccaccaaggaacaggcatttaagatt
ggtaatgaaattgcagaggctgtgactgccaccaaccctaaacccatcaaactgaagttc
gagaaggtgtacctgccatgtgtgttacagactaagaagcgctacgttggatacatgtac
gaaagcttggatcagaaaaaccctgtgtttgatgccaaaggcattgaaactgtacgccga
gatggctgtcctgctgttgccaagattctggagcgatctctaaagcagctgtttgagtca
cgggacatcagcgtggtgaagcagtacgtacagcggcagtgtgtgaaagtgctggaatcc
aaagccagcatgcaggacctcacctttgccaaagagtatcgcggcagtggatcgtaccgg
ccaggggcctgtgtccctgctctggagctcaccaggcgtatgatggcgttcgatcggcgt
ttagagccgcgcgtgggtgagcgtgttccatacgttattgtgtatggaaggccaggagtc
cctctcatacagctggttcgacgtccgctggaagttctgcaggacccaagtctacgtctc
aacgccacctactacatcacaaagcagatcttaccgccactcgcacgaattttcaacttg
attggggtggatgtgttcagctggtaccaggagctgccaagggtacagaaggtatggagc
tctggggtgtttgcagggggcgaggagagcacaaggaaaggtaccatctctcagtatttc
actacactgcattgccccgtttgtgacgagctcacgcagctgggagtgtgtgagcattgc
cgtgctgaaccacagcttgtcgctattaccctgcaccaggacttgaggctgtgggagagc
caacaagaccagctcttaaaggtatgtaggagctgcagtggtagtgcagaacgtcagatg
ccatgcatcacattggactgccctgttctttacaaactgtcccgagttaatcgacacctt
tctcgagggccttatcttcgccaacttctggagcagttttga
DBGET
integrated database retrieval system
