Triplophysa rosa: 130566082
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Entry
130566082 CDS
T09216
Symbol
taf4b
Name
(RefSeq) transcription initiation factor TFIID subunit 4
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
tros
Triplophysa rosa
Pathway
tros03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
130566082 (taf4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tros03021
]
130566082 (taf4b)
03036 Chromosome and associated proteins [BR:
tros03036
]
130566082 (taf4b)
Transcription machinery [BR:
tros03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
130566082 (taf4b)
Coactivators
SAGA/TFTC/STAGA complex
130566082 (taf4b)
Chromosome and associated proteins [BR:
tros03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
130566082 (taf4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
TAF
TAF10
Motif
Other DBs
NCBI-GeneID:
130566082
NCBI-ProteinID:
XP_057209285
LinkDB
All DBs
Position
LG15:complement(15356746..15377019)
Genome browser
AA seq
817 aa
AA seq
DB search
MAETSVSNELNNNHTREKTDEVSAEALKERDDGRASVSDESLQTKQTASGKENETSNPDT
SKNSNSDSASHNEEQPKQKEAQQPVTSTSLSVSSEPAPKIIAGTAHVRSTTRVVTGTSGV
QGSGATSLALVPQPAKVAVNQPRVTTLTPGVTLSRISTPLQNLTVTRAPVPLQLPANFQV
PQGMVLIRSDSGQLMLVSQQALAQAQAQGMLPKPPNASAIVRPSSTQATATPIIRVSLPP
STTTNFKPNPTTVTVQKPRATGTAIFTPSGSTGTTITKPGSVIGTAVKKLNSTVGTVIKG
SQMTPNSSTAGTFNQRSNSVSAATVINSPAVKSTGKGALGQGNAPRMVCPNIQTRSNTNT
SSTSVTVTADTLENVKKCKNFLVTLMKLASSGTPSANMAQNVKALVKGLLDGKLEEEEFT
EKLYMELKSSPQPYLVPFLKRSLPAVRQLTPNSQLFIQQCEQIKPSDSTKGATQKPASTV
SSSLKSTQPTRTAQLLVQQPKGVIVTHSVTSSPQVVLPAQTQSQPKQLVIQTKTHPRGAV
VRPFLQASKMHFPQPALAAQTQGFKDSTQSSFRDDEDINDVASMAGVNVSEENARILASG
SELVGSVIRSCQEEPFLFPSALQTRVLHIGGSLGITEVCPDVLEMLSLATQKRLRDLLEK
LTAVAQHRQISYKDDWRYSQTSDTRSQLKFLEQLERLEKQRREEEEREALLRIARSRSNN
EDPDQQRLKQRAKEMQQLELAQMEHRDANLAALAALGPRKRKPLEAPGPGTNQLLGPYWQ
FSIQRPPIRVTLRDLIFCMEQDPTLRHSLMIYKTYLQ
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaacatctgtctcaaatgagttaaacaacaatcacacccgtgagaaaacagat
gaagtgtccgctgaagcgttaaaggagcgagatgacgggcgcgcgagcgtctctgatgag
tctttgcaaactaaacaaaccgcgtcaggtaaggaaaacgagacgtcaaaccccgacaca
tctaaaaacagcaactcggattcagcttctcataacgaagaacaaccgaaacaaaaagaa
gcacaacagcctgtgacttcaactagcctatcagtttcatccgaacctgctcctaagatc
atagctggcactgcacacgtcagatccaccaccagggttgtgactggtacatccggtgtg
cagggatcaggggccaccagcttggcactggttcctcaacctgcaaaggtagccgtgaac
cagcccagggtcaccactctgacgccaggtgtgacattgtcgaggatttcaaccccgttg
caaaatctgacggtgacacgtgcccccgtgccattgcagctgcctgccaacttccaagtc
ccgcagggaatggtgttaatccgcagtgacagtgggcagttgatgttggtatctcagcag
gctttggcccaagcgcaggctcaaggaatgctgccaaaaccacctaatgcttcggctata
gttagaccttcatccacccaggcaactgctacacccatcatccgagtttctctcccccct
tcaaccactaccaacttcaaacctaacccaacaactgtaactgttcagaaaccaagggcc
acagggacagctatattcaccccatccggttcgacaggaacaaccatcactaaaccaggc
agtgttataggaactgcggtcaaaaagctcaactccaccgtggggaccgttatcaaaggc
agtcaaatgactccaaacagcagcacagcggggacctttaaccagaggagtaattctgtc
agcgcagcaactgtaattaattcgccggctgtaaagtctacgggaaaaggcgctcttggt
cagggtaatgccccacgtatggtttgtcctaacatacaaaccagatccaacacaaacaca
tcctcaacctcagtcactgttacagcggacaccctggagaacgtgaagaagtgtaagaac
ttcctggtcacccttatgaagctagcatcgagtggcactccctcggccaacatggctcaa
aacgtcaaagcgcttgtcaagggcctgctggacgggaagctagaggaggaagagtttact
gaaaaactctacatggagctcaaatcttcccctcagccatatctggtgcctttcctgaag
agaagcctgccagctgtgcgtcaactcactccaaactcacagcttttcattcagcagtgt
gaacaaatcaagccctcagattcaaccaagggtgcaacccagaagcccgcctccaccgtc
agctcctccctcaaatccacacaaccaaccagaactgctcagctgttggttcagcaaccc
aaaggagtaatcgtcacgcattctgtgacatcatcaccacaggtggtcctacctgcgcag
acccagtctcaacccaaacagctggtcattcaaaccaaaactcatccaagaggtgctgtc
gtgcggcctttccttcaggcgtctaaaatgcactttcctcagccggcccttgcagcccag
acgcaaggcttcaaggacagcacccaaagctctttccgagatgacgaagacattaatgat
gtggcgtccatggcaggagtgaatgtgagtgaggagaacgctcgtatattggcctctggc
tctgagctcgtgggatcagtgatccgctcctgtcaagaggagccctttttattcccatca
gccctccagacacgagtgctgcacatcggtggttctctgggtatcacagaggtatgtcct
gacgttcttgaaatgctctctctggcaacacaaaagagactaagagacctgctggagaag
ctcactgctgtggcacaacatcgccagatctcctataaggatgattggcgctacagtcag
accagtgacacgcgctctcagctaaagtttctggagcagctggaaagactggagaaacag
agacgagaggaagaagagcgagaagcgttgctccgcatcgcccggagtcgctcaaacaat
gaagaccctgatcaacagcgtctgaaacagagagcgaaagagatgcagcagttggagttg
gcacagatggagcacagagatgccaatttggcagcgctggcagccctggggccccgtaag
aggaaacctctggaggcacccggcccagggaccaaccagttgttaggtccatactggcag
ttttcgattcagagaccaccaatacgagtcactttgagagatctgattttctgcatggag
caagacccaacactcagacactctcttatgatatataaaacatatttacaatag
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