Triplophysa rosa: 130566144
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Entry
130566144 CDS
T09216
Symbol
rxrgb
Name
(RefSeq) retinoic acid receptor RXR-gamma-B isoform X1
KO
K08526
retinoid X receptor gamma
Organism
tros
Triplophysa rosa
Pathway
tros03320
PPAR signaling pathway
tros04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
130566144 (rxrgb)
03320 PPAR signaling pathway
130566144 (rxrgb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tros03000
]
130566144 (rxrgb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
tros03310
]
130566144 (rxrgb)
Transcription factors [BR:
tros03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
130566144 (rxrgb)
Nuclear receptors [BR:
tros03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
130566144 (rxrgb)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
Nuc_recep-AF1
zf-C4
Motif
Other DBs
NCBI-GeneID:
130566144
NCBI-ProteinID:
XP_057209378
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Position
LG15:complement(7273950..7293732)
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AA seq
464 aa
AA seq
DB search
MWHPAALPPHGQLHGKESGHYSHHSSALNSPHSQPPPMSSMVGHPSVISSSRPLQSPMIT
LGSMNGLASPYSVITPSLTSPLGSLPSTPSMSFNTLGSPQMNPLNMNSSEDIKPPPGLTP
LGNISSYQCSSPGSLSKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYKCRDCK
ECLIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRGKEKSDNEVESTSSFNEEMPVDKI
LDAELAVDPKTETYTESSPGNSTNDPVTNICHAADKQLFTLVEWAKRIPHFSDLPLDDQV
ILLRAGWNELLIASFSHRSITVKDGILLGSGLHVHRSSAHSAGVGSIFNRVLTELVSKMK
DMQMDKTELGCLRAIVLFNPDAKGLSNPVDVEALREKVYASLETYTKQIYPNQPGRFAKL
LLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQIT
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgtggcatccggcggcgttacctcctcatggtcagcttcacggtaaagagagtggccac
tatagccatcactctagtgctctgaattctccccactctcagcccccacccatgagctcc
atggtgggtcatccgtccgtcatcagttcttcccgcccactgcagtctcccatgatcacc
ctgggctctatgaatgggctggcttcaccatattctgtcatcaccccgtctctcacctca
ccgttgggttccttgccttctacgcccagtatgagctttaacactctcggcagcccacag
atgaatccgttgaatatgaacagctcagaagacattaagcctcccccaggattgactcct
ctgggtaacataagcagctaccagtgcagcagtcctggatccctctccaaacacatctgt
gccatttgtggggaccgatcttcggggaagcattacggtgtttacagttgtgaaggatgc
aaagggttctttaaaagaaccattcgaaaagacctgacctacaagtgtcgagactgcaaa
gaatgcctgattgacaaacgtcagcgcaaccgctgtcagtattgccgctaccagaagtgc
ctggctatgggcatgaagagggaagcggtgcaggaagaaaggcagcgtgggaaggaaaag
agcgataatgaggtggaatcgacgagcagctttaatgaagagatgcctgtggataagatt
ctggatgcagaactcgcagtggatcccaagacagagacatacacagagagcagccctgga
aactcgacaaatgacccggtcactaatatctgccatgcagctgacaagcagctgttcact
ctggtggagtgggccaagaggatacctcacttctctgatctgccgctagatgatcaggtc
attcttcttcgagcaggatggaatgagctcctcattgcttcgttctcacatcgctcgatc
acagttaaagatggtatcttactgggctcaggcctccatgttcacaggagcagtgctcac
agtgcaggagtggggtccattttcaacagggtattgactgagcttgtgtcgaaaatgaag
gacatgcagatggataaaacagaactgggctgcctcagagccattgttctctttaaccct
gatgccaaaggcttgtccaacccagtggatgtagaagcactgagggagaaagtttatgct
tcacttgagacctacacaaaacagatttaccctaaccagcctggcaggttcgctaaactt
ttattgcgcctccccgccctccgatccatcggcctcaaatgtttggagcatctatttttc
ttcaagttgattggagacacacccatagacactttcctaatggaaatgcttgaagcaccc
caccagattacatga
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