Triplophysa rosa: 130566223
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Entry
130566223 CDS
T09216
Symbol
ptchd4
Name
(RefSeq) patched domain-containing protein 1
KO
K24682
patched domain-containing protein
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tros04990
]
130566223 (ptchd4)
Domain-containing proteins not elsewhere classified [BR:
tros04990
]
Other domain-containing proteins
Patched domain-containing proteins
130566223 (ptchd4)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
Motif
Other DBs
NCBI-GeneID:
130566223
NCBI-ProteinID:
XP_057209510
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Position
LG15:6219965..6242073
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AA seq
911 aa
AA seq
DB search
MCFLGRNGASSAASRIWRRMLRQVIHRGLKASFYWLGLFVSRHPVFFLTVPAVLTIIFGS
TVLSRFKPETDLEILVAPTHSLAKIERSLANSLFPIDQSKHKLYSDLHTPGRYGRLILLA
KSGNILELAEQVLQVHKKVLDMRVNYKGFNYTFAHLCVLSHRDKRCLLDDIITIFEDIRL
AVLSNSTFAKVPVSYPNTTLKNGRVSFIGHQLGGVPLSTKNSDQQVKFARAIQITYYLRN
LGPVVQDIIAEKWESEFCKLVHQLATDSEELHIHSLTSFSLWRDFHKTGVLAKSEVLVSL
VLVLLAATISSSMRDCLRGKPFLGLLGVLTICIANVTAAGIFFISDGKFNSTLLGIPFFA
MGHGTKGVFELLAGWRRTRESLPFKERVADAFADVMVCYTMTSSLYIITFGMGASPFTNI
ESVKVFCQSMCVAILVNYFYVFSFYGSCLVFAGQLEQNRYHSVFCCKIPSVEYLDRQPTW
FKTMMSDGHDLSTHHDSVPYQNHFIQHFLREHYTEWITNTYVKPFVVILYLIYASFSFMG
CLQISDGSNIINLLASNSPSVSFALTQQKYFSNYSPVIGFYIYEPIEYWNSSVHDQLKTL
EKGFNTISWIDNYVHYLKVVNVSASTKSDFINILKTSFLRSPEYQHFVDDIIFSKNGDEY
DIIASKLYLVARTTEKTREEVVELLEKLRPLSLVNNIKFIVFNPTFVFMDRYSSSIISPI
LTSGFSVLTILILTFFLVINPLGNFWLILTVTSVELGVLGLMTLWNVDMDSISILCLIYT
LNFAMDHCVPHLYTFVLATEHTRTQCIKISLEEHGAAILQNTSCFVIGIMPLLFVPSNLT
YTLFKCSLLTVGCTVLHCFVILPVFLTFFPPSKKRHKKKKRAKRKEREREREREEIECIE
VRENPDHVTNV
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atgtgcttcttaggaagaaacggggcatcgtctgctgcaagccggatctggaggaggatg
ctgcggcaagtgatacacagagggctgaaagcttctttctactggctgggtttgttcgtg
agcaggcatccggttttcttcctcaccgtccccgcagtgctgaccatcattttcggatcc
acggtgctgagcaggtttaagcccgaaacggacctggagatcctggtggccccgacgcac
agcctcgcgaagatcgagcggagtctcgccaacagtctcttccccatagaccagtccaaa
cacaagctgtactcggacctgcacacccctggcagatatggcagactcatcctgctggcc
aaatccggaaatatactggaacttgccgagcaggtgctccaggtgcacaagaaggtcctg
gatatgcgcgtcaattacaaaggcttcaattacactttcgcgcatctctgcgtcctgagt
caccgggacaagagatgccttctggatgatatcatcacgatatttgaagacattcgcttg
gctgttctctctaacagcacttttgccaaggtccctgtgagctatccgaatacaacgtta
aagaatggtagagtgtccttcatcggccatcagctgggcggcgtgcccctgtccacgaaa
aactccgaccaacaggtcaaatttgcccgcgccatccagatcacctactacctccgcaac
cttggcccagtggtacaggacatcattgctgagaagtgggaaagcgaattttgtaagctg
gtgcaccagctggctacggacagcgaggagctacacattcactcgctcacttccttcagc
ttatggcgggacttccacaagacgggcgtgctggccaagagcgaggtgctggtcagcttg
gtgctggtcctcctggcagcgaccatctccagctccatgcgggactgcttgcgaggaaag
cccttcctgggcctgttgggcgtccttaccatctgcatcgccaacgtgacggcagctggg
atttttttcatctcagatgggaagtttaactctacgctgctcgggatcccctttttcgcc
atgggacatggaacaaaaggggtctttgaacttctggcaggctggagaagaacccgagag
agtttgcccttcaaggagagagtggcagacgcctttgccgacgtgatggtatgttacacc
atgaccagctctctctacatcatcacattcggtatgggcgccagtccgttcaccaacatc
gaatccgtgaaagtcttctgccagagcatgtgcgtagcaatactggtaaactacttctac
gtgttctccttctacggttcctgcctggtgtttgccgggcagttggagcagaatcgctat
catagcgtcttctgctgtaagatcccgtccgtggagtacctcgaccgccagcccacctgg
tttaagaccatgatgagcgacggtcacgacctctccacgcatcacgacagcgtgccgtac
cagaaccacttcattcagcacttcttgcgggagcactacacagaatggattaccaacacc
tacgtcaagccgtttgtggttatcctttacctgatttacgcctctttttcgttcatggga
tgtttacagatcagtgacggatctaatataattaatctgctagctagtaattcgcccagc
gtgtcgttcgctctgacacaacagaagtacttcagcaactacagcccggtgatcggcttt
tacatctacgaacccatcgagtattggaactcctcagtgcacgaccaactcaagacactg
gaaaaaggcttcaatacgatttcgtggatcgataactacgttcactatctgaaggtggtc
aacgtgagcgcgtcaaccaaaagtgatttcatcaacatcctcaaaacctcgtttctcaga
agccccgaatatcaacacttcgtggacgacatcatattctcgaaaaatggagacgagtac
gacattatcgcgtccaagttgtacttggtcgccaggacgaccgagaagaccagggaggag
gtcgtggagctgctagaaaaacttcgacctctgtccctggtcaacaacattaagttcatc
gttttcaaccccaccttcgtgttcatggaccgctacagttcctccatcatctcccccatc
ctcacgtcaggtttcagcgtgctgaccattctcatcctcaccttcttcctggtcatcaac
ccgctggggaacttctggttgatcttgaccgtcacctctgtggagctgggcgtcctgggt
ctcatgacgctctggaatgtagacatggacagcatctctatcctgtgccttatttatact
ctcaactttgccatggatcactgtgtcccccatctctacacgttcgtactggccaccgag
cacacgcggactcagtgcatcaaaatttcgttggaggaacacggggcggccattttgcag
aacacctcgtgttttgtgatcgggataatgccccttctctttgtgccttctaacctgacc
tacacactgttcaaatgctccctgctcactgtcggatgcacagtgctgcactgtttcgtc
atcctgcctgtgtttttgacgtttttcccaccctcaaaaaaacggcacaagaaaaagaaa
cgagccaaacggaaagagcgcgaacgggagagggagagagaggaaatcgagtgcatcgaa
gtcagggaaaaccccgaccacgtgaccaacgtttga
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