Triplophysa rosa: 130566409
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Entry
130566409 CDS
T09216
Symbol
thbs4a
Name
(RefSeq) thrombospondin-4a isoform X1
KO
K04659
thrombospondin 2/3/4/5
Organism
tros
Triplophysa rosa
Pathway
tros04145
Phagosome
tros04510
Focal adhesion
tros04512
ECM-receptor interaction
tros04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
130566409 (thbs4a)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
130566409 (thbs4a)
09144 Cellular community - eukaryotes
04510 Focal adhesion
130566409 (thbs4a)
09142 Cell motility
04820 Cytoskeleton in muscle cells
130566409 (thbs4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tros04131
]
130566409 (thbs4a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tros04147
]
130566409 (thbs4a)
00536 Glycosaminoglycan binding proteins [BR:
tros00536
]
130566409 (thbs4a)
Membrane trafficking [BR:
tros04131
]
Endocytosis
Phagocytosis
Opsonins
130566409 (thbs4a)
Exosome [BR:
tros04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
130566409 (thbs4a)
Exosomal proteins of colorectal cancer cells
130566409 (thbs4a)
Exosomal proteins of bladder cancer cells
130566409 (thbs4a)
Glycosaminoglycan binding proteins [BR:
tros00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
130566409 (thbs4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
EGF_3
COMP
EGF
cEGF
Vinculin
DUF7630
Motif
Other DBs
NCBI-GeneID:
130566409
NCBI-ProteinID:
XP_057209854
LinkDB
All DBs
Position
LG2:4148135..4160624
Genome browser
AA seq
966 aa
AA seq
DB search
MGVWIRTVLSLQVILLLPVTVKAQGIVYDLLASSDCLPDLLQGGISAKNMDNVFILATLQ
LQSRAPARIFRIFNAADNTDYFDFAVQGKLNKVILKYMKSNGKQGTNTFSKVQLVDGQKH
HIMLHFGGLQQGTPFTTLYVDCSLVERVHDVPVAFKSLPQGSERVTLKTLQTSSQDKLLD
LKLVLDESIENVVELQDCSPESSNNEEIEYKDHRGQQKETLQLLGTTSKMDAGPMFELMR
MIQELKEKVDRQTKETADLRKTILECVQCKGHSGTGHDTGKPNDRDSECGRGVCFKPGMC
KKTADGVECAPCPEGYTGDGIQCDDIDECQFNPCFAGVRCVNTVPGFRCEKCPRGLTGPE
IQGVGISYAQSNKQMCNDVDECQVDNGGCTPNSNCHNTVGAFHCGNCKSGYMGDQTNGCQ
NIGPGPGPASISERLCGNGQPNPCNINAECVVERDGRISCLCAIGWAGNGYVCGKDTDID
AYPDSKLQCRDSTCKKDNCIFVPNSGQEDADRDGKGDACDEDADSDGIINEQDNCWLTPN
IDQKNSDKDLHGDACDNCMLVENPDQRDTDKDGLGDACDDDIDGDGLKNILDNCQRVPNP
DQKDRDNDGVGDACDSCPEVANPNQSDTDNDLVGDTCDTNIDSDGDGTQDSKDNCPTIIN
SSQLDTDKDGRGDECDDDDDNDGILDDQDNCRLVANADQKDENEDGVGDACAGDFDKDQV
IDMIDTCPENAEVTLTDFRAYQTVVLDPEGEAQIDPNWVVLNQGMEIVQTMNSDPGLAVG
YTAFSGVDFEGTFHVNTVTDDDYAGFIFGYQDSFSFYVVMWKQTEQTYWQAVPFRAVAEP
GIQLKAVKSKTGPGEFLRNSLWHTGDTNDQVRLLWKDPRNVGWKDKVSYRWNLKHRPQVG
YMRVKIYEGTDLVADSGVIIDTSMRGGRLGVFCFSQENIIWSNLRYRCNDTIPEDYTEYR
AKQLTN
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtttggataaggactgtgttgagtttacaggttattttactgcttcctgtcacg
gtgaaagcccaaggaatcgtttatgatctcctggcgtcatcggattgcctccctgatctt
ctgcaaggaggaataagtgcaaaaaacatggacaacgttttcatcctggcaaccctgcag
ctgcagagcagagctccggcgcgcatcttccgcatcttcaacgctgccgacaacacagac
tactttgacttcgcagtgcaggggaaactcaacaaagtcattttgaaatacatgaaaagc
aatggaaaacaagggacaaacactttctccaaagtgcagctggtggacggtcagaagcac
cacatcatgcttcacttcggtggtctgcagcagggcacccccttcacgacgctctacgtg
gactgcagtctggtggagagagtgcacgatgtacccgtagccttcaaatctttaccgcag
gggtccgagagagtgacactgaagaccctacaaacatcatctcaagacaagctgttggac
ctgaaactcgtgctggatgagtccattgaaaatgttgtggagcttcaggactgcagccct
gagagttcaaacaatgaggagatcgaatacaaagatcacagaggacagcagaaagaaaca
ctacagctgctcggaacaacctcaaagatggacgctggtccgatgtttgagttaatgcgg
atgatccaggagctaaaagagaaggttgaccggcagaccaaagagactgcagacctgagg
aagactatcctggagtgtgttcaatgcaagggtcattcaggaacaggacatgacacagga
aaaccaaacgatagggattccgagtgtggacggggggtctgttttaaaccgggcatgtgt
aagaaaacagcagacggagtggagtgtgcaccctgtcctgaaggctacactggagatgga
atccagtgtgatgatatagacgagtgccagttcaacccgtgttttgctggtgtacggtgc
gttaacaccgtgccggggttcagatgtgaaaagtgtccacgaggcctcactggtccagag
atccagggtgtgggcattagctacgctcagtccaacaaacaaatgtgtaatgacgtggat
gagtgtcaggtggataatggcggttgcacacccaattcaaactgccataacacagtgggt
gcattccactgtggaaactgcaagagcggatacatgggggaccagacgaacggctgccaa
aacattggacctggacctggtcctgcttctatatctgaaaggctgtgtggaaacgggcag
ccgaatccttgtaacatcaacgcagagtgtgtggtggagagagacggcagaattagctgt
ctgtgcgccattggttgggcaggaaacggctacgtctgtggaaaggacacagatattgat
gcctatccagacagcaaacttcaatgccgagattcaacctgcaagaaggataattgcata
tttgttccaaactcgggccaagaagatgcagacagagatgggaagggagacgcctgtgat
gaggacgcagacagtgatggaatcatcaatgaacaggacaactgctggttgacacctaac
atagaccagaagaacagcgacaaagatctgcacggcgatgcttgtgataactgcatgctc
gtagagaatccagaccagcgcgacacagataaggacggactgggagacgcctgcgatgat
gacatagacggagatggattaaagaacattctggataactgtcagagggttccaaaccct
gaccagaaggacagagataatgatggtgttggtgatgcatgtgacagctgccctgaggtt
gcaaaccccaaccagtctgatactgacaatgatcttgtaggtgacacatgcgacacaaac
atcgacagtgatggagacggaactcaggacagcaaagacaactgccccaccatcatcaac
agctcccagctggacaccgataaggacggacgcggagacgaatgcgacgatgacgatgac
aacgacggcatcttggatgatcaagataactgcagactggtggctaatgcagatcagaag
gatgaaaacgaggatggggtgggtgatgcctgcgccggagactttgacaaagatcaggtg
attgacatgatcgacacctgtcctgagaacgcagaggtcacactcacagacttcagagct
tatcagaccgtggttctggatccagagggcgaggctcagattgaccccaactgggttgtt
ctgaatcagggtatggagattgtccagaccatgaacagtgaccctggactagctgttgga
tacacagctttcagcggtgttgactttgaaggcaccttccacgtgaacacagtgaccgat
gacgactacgcaggcttcatcttcggttaccaggattccttcagtttctatgtggtgatg
tggaagcagacagagcagacgtactggcaggcggtgcccttcagagccgtggccgagcct
ggcattcagctcaaggctgttaaatctaaaacaggccctggggagttcttgaggaattct
ctttggcacaccggagacacaaacgaccaggtgcgcttgctgtggaaagaccctcgtaac
gtgggctggaaggacaaggtgtcctaccgctggaatctgaagcacaggcctcaagtggga
tacatgagagtgaagatctatgaaggcacagatcttgtggcagactctggagtcattata
gacaccagcatgagaggcggccgtctgggggtcttctgcttctcacaggagaacatcatc
tggtccaacctgagatatcgctgtaacgacacaatccctgaagactatacggagtacaga
gccaagcagttgaccaactaa
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