Triplophysa rosa: 130566497
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Entry
130566497 CDS
T09216
Symbol
clip1a
Name
(RefSeq) CAP-Gly domain-containing linker protein 1 isoform X1
KO
K10421
CAP-Gly domain-containing linker protein 1
Organism
tros
Triplophysa rosa
Pathway
tros04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
130566497 (clip1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tros03036
]
130566497 (clip1a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tros04812
]
130566497 (clip1a)
Chromosome and associated proteins [BR:
tros03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
130566497 (clip1a)
Cytoskeleton proteins [BR:
tros04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
130566497 (clip1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP_GLY
CLIP1_ZNF
Crescentin
BRE1
NET2A
ACBP4_C
Surfac_D-trimer
Motif
Other DBs
NCBI-GeneID:
130566497
NCBI-ProteinID:
XP_057209926
LinkDB
All DBs
Position
LG2:complement(2155488..2179840)
Genome browser
AA seq
1667 aa
AA seq
DB search
MSTTKPSGLKAPSKIGKLAGGGTTKTSPSAGAPKPTASDKSSTDAQDAGEQFKVGDRVWV
NGNKPGVVQFLGETQFAPGQWAGIVLDEPIGKNDGSVSGVRYFQCEPLMGIFTRPSKLSR
TEGEANGTATAPPSRAASPTPSTASTSATTKKPATPTKAEAPPSELVRSKSESVSNLSES
GSVKKGERELKMNERVLVAGSKAGVVRFLGETDFAKGEWCGVELDEPLGKNDGAVAGTRY
FQCQPKYGLFAPVHKVTRIGFPSTTPAKAKTTARKMVTTPGGLKRSPSASSISSMSSVAS
SASCKPSRTGLLTETSSRYSRKISGTTALQEALKEKQQHIEQLLAERDLERAEVAKATSH
VGEVEQELVLVREGQEQYVLEMEAKMDQLRGLVEAADREKVELMNQLEEEKRRVEDLQFR
VEEACITKGDLETQTRLEHALLKELEQSLLFEKTKAEKLQRELEDSRVATVSEKSRILEL
ERDLALRDQEVSALRTPLEAGQDGVTEDSTAASLREELCSLRTQLAAQSASHQAELSALR
ETLEARESGHGEALTRLQEASSRLAKENEQLCVRLSKAEEENVSTVEQWRTKLATAEASH
QNVLEEIKSSSGAGEGALERLKASYKLELEEVVNKHTADASGWANETKELRIQLHGVTEE
KERLEESLRASIEKTEEQHLVEMEDVLGKLHTAELRVKELEEVGGKLQDKGREAPVLSDA
FQTLRAQHSEGNQEMQRLLARAEETKTKARSQEEKVVELNSVLEEKAQKLSELSKEKSSL
ENEVKELKENLETASNDQAKSSQSNQELHDELKKNKEQCTSLAADLQDTKSQLAGLQRNL
KASEEKRDMLTKDKTKLENDITDVMKSSGDSSAQLTKMNEELNQKERRLEELQNQLTEQN
EKMAEAEERRSQAQVQAEKEAKEMSEKQLNGLQEKIKVLEKNVEEHQAKAKDADALREKA
LADSTEHHSKEIQDSKAKFEKAKAELRVSQEEREELKKRLEELMPFKEKAEALEQAAQTA
QTSLVSLTQQSDQLNKDRSEAQTLVTRLKNTVQEIQSKLDNVTEQNSQDAENINTLAAEI
ASLKQAVCEGAQAVDALKTENEKLTLQLASSHEDSNVLLDLKKECDDLNKQLKEMKAREK
TLTSEAEKEKTALQQSLQTQSALMSEKDKEFNSLRQQLDSVTEQNSQCQQKQSSDAENIS
TLAAEIASLKQAVCEGAQAVDALKTENEKLTLQLASSHEDSNVLLDLKKECDNLNEQLKE
MKAREKTLTSEAEKEKTALQQSLQTQSALMSEKDNELNSLRRQLDSVTEQNSQKQSSDAE
NINSLAAQIEVLKTTAAEKTQAMDALKIENERLTVELTSSLNDGDIMLNLKKECETLNDQ
VKEMKAREKTSTSQAEKEKTALQQSLQTQSALISEKDKELNSLRNELRKECDALKDPLKE
KKKRGRTSTSEAEKEKTALQQSLQTQSALMSEKDKELNSLRQQTADLRGTVQVLQSAEKS
YESETRQLQERVKHLEKNVSDAHIGNQGDASSDDSVVNQWREAKENAERQVEFLNSVIVD
LQKKNNEQKGKLEKMAEAALNGNSAGDTETHNSHTETTKKKPPPRLFCDICDCFDLHDTE
DCPTQDQMLDSPPHTTYHGSPHDERPYCDICEAFGHWTESCNDDQTF
NT seq
5004 nt
NT seq
+upstream
nt +downstream
nt
atgagcacaacaaagcccagtggactcaaagcacccagcaaaatcggcaaactagccggc
ggtggaaccacgaaaacatctccctctgcaggtgcccctaaacctactgcgagtgacaaa
tcctcaactgacgctcaggatgcaggagagcagttcaaggtcggagatcgcgtctgggtg
aatggcaacaagccgggcgtcgttcagtttctcggagagacccagtttgctccggggcag
tgggcgggcatcgtgctggatgagccaatcgggaagaacgacggctcggtgtcgggtgtg
cgctattttcagtgcgaaccattaatggggattttcactcgcccctccaaactgtcccgc
actgaaggggaggcgaacgggacggcgacggcccctccgtctcgtgcggcgtcacccact
ccctccaccgcatcaacctctgctacgaccaagaaaccggccacgcccaccaaagcagaa
gcgccgccctcagagctagtgcgatcaaagagtgaatccgtgtcgaatctgtcggaaagc
ggttcggttaagaaaggcgaacgagagctgaagatgaatgaacgggtgctggttgccggc
tcgaaagctggtgtggtgcgtttcttaggggaaacggattttgctaagggggaatggtgt
ggcgttgagctggacgagcccttgggaaagaatgacggcgctgtggctggaaccaggtat
ttccagtgtcagcccaagtacggtctgtttgcaccggtgcacaaggtgacgcggatcggt
ttcccctccaccaccccggccaaggccaagacgaccgcgcggaaaatggtgaccacgcca
ggaggactgaagcgcagccccagtgcctcctccatcagctccatgagctccgtagcctca
tccgccagctgcaagccgagccgcacgggactgctgacggagacgtcctcgaggtactcg
cggaagatctcgggcaccacggcccttcaggaggccctgaaggagaaacagcaacacatc
gagcagctcctcgccgaacgtgacctagagcgagccgaggttgccaaggcaaccagtcat
gtgggtgaagtggagcaggagctggtgttggtgagggaaggccaggagcagtacgtgttg
gagatggaggctaagatggaccagctgcgagggctggtggaggctgcagacagagaaaag
gtggagctaatgaaccagctggaggaggagaagaggagggtggaggacctgcagtttcgg
gtggaggaagcttgcattaccaaaggcgatttggagacgcagacgcgactggagcatgcc
ctcctaaaggagctagaacagagtctgctctttgaaaagaccaaagctgagaaacttcag
agggagttggaggactcgagggtggccacggtctccgagaagtcccgtatcttggagctg
gagagggatctggctttgagagaccaggaggtatctgccctccgcacgcctctggaagct
ggacaggatggggtcaccgaggactccaccgcggcatctctccgggaggagctgtgttca
ctccgcacgcagctggcggctcaaagcgccagtcaccaggccgaactctcagccctgcgg
gagaccctcgaagcccgagagagcggacacggcgaggccttgacgcggcttcaagaagcc
tccagtcgcttggcgaaggagaacgaacagctatgcgtccgcctctcaaaggcagaggaa
gaaaatgtgagcacggtggagcagtggcgcactaaactggcgacggccgaagcatcccac
cagaatgtcttggaggagatcaaatcctcctcgggagcgggtgaaggcgctctggaacgc
ttaaaagcgtcatataaactagaactagaggaggtagttaacaagcacactgctgacgcc
tcgggatgggcgaacgaaaccaaagagctccggatccagctccacggggtcaccgaggag
aaggagcggctggaggagtcgctgcgagccagtattgagaaaacggaagagcagcacctg
gtggagatggaagatgtcttgggaaaactgcacacggctgaactcagggtaaaagagctt
gaggaggtggggggtaagttgcaggataaggggcgagaggctccggtgctgagcgatgcc
tttcagacgctgcgggcgcagcacagcgaaggtaaccaggagatgcagagactgttggct
cgggcggaggagacgaagaccaaagccagatcccaggaggagaaggttgttgagttgaat
tcagtattagaggagaaggcacaaaagttgagcgagctgtcgaaggaaaagagctctttg
gagaatgaagttaaagagctgaaggagaatcttgaaacggcatctaatgaccaagccaaa
tcttctcagtcgaatcaagagttacacgatgagctcaagaagaacaaggagcaatgcaca
tcactcgctgctgatctacaggacaccaagagtcaactggccggattgcagagaaatctg
aaagcgagcgaagaaaagcgcgacatgttgaccaaagacaagactaaactcgagaacgac
atcacggacgtgatgaagtcatcgggagacagttctgctcagctaacgaagatgaacgag
gaactcaaccagaaagaaagaagactagaggagcttcagaaccagctgacggagcagaat
gagaagatggctgaagccgaggaacgccggtcacaagcacaagtccaggctgagaaagaa
gctaaagagatgtctgaaaaacagctgaacggcctgcaggagaaaatcaaagttttggag
aagaatgtcgaagaacatcaagctaaagccaaagacgcagatgctttaagagagaaagct
cttgcagattctacagaacatcattcaaaagaaattcaggattcaaaggctaagtttgaa
aaagccaaggctgagctccgtgtgtctcaggaagaacgtgaggagttgaagaaaaggctt
gaggaattgatgcctttcaaagaaaaagctgaggctttagagcaagcggctcagaccgca
cagacatcactggtgagtttgacccagcaaagcgatcagctgaacaaagaccgatctgag
gctcagacactggtgacacgactcaaaaacactgtgcaagaaatacaatccaagctggac
aatgtaaccgagcagaactcgcaggacgcggagaacatcaacaccctcgctgctgagatt
gcgtctctgaaacaggcggtttgtgaaggagctcaggcggtggacgctctgaagacggag
aatgaaaaactgaccttacaactcgccagcagccatgaagacagtaacgttctgctagat
ctgaagaaggagtgtgacgatctcaataaacaactgaaggagatgaaagccagggagaaa
actttaacaagcgaagcggagaaagagaaaacagcacttcagcaatctctccaaacacag
agtgccttgatgtcagagaaggacaaagaattcaactctctcagacaacagctggacagt
gtaaccgagcagaactcgcagtgtcagcagaaacagagttcagacgcggagaacatcagc
accctcgctgctgagattgcgtctctgaaacaggcggtttgtgaaggagctcaggcggtg
gacgctctgaagacggagaatgaaaaactgaccttacaactcgccagcagccatgaagac
agtaacgttctgctagatctgaagaaggagtgcgacaacctcaatgaacaactgaaggag
atgaaagccagggagaaaactttaacaagtgaagcggagaaagagaaaacagcacttcaa
caatctctccaaacacagagtgccttgatgtcagagaaggacaacgaattaaactctctc
agacgacagctggacagtgtaacggagcagaactcgcagaaacagagttcagacgctgag
aacatcaacagtctcgctgctcagattgaggtgttgaagacgacagctgcggagaaaacc
caggcgatggatgctctgaagattgagaatgaacgactgacggtggaactcaccagcagc
ctcaacgacggtgacatcatgctcaatctgaaaaaggagtgcgagaccctcaatgatcaa
gtaaaggagatgaaagccagagagaaaacgtcgacaagccaagcggagaaagagaaaaca
gcacttcagcaatctctccaaacacagagtgccttgatctcagagaaggacaaagaatta
aactctctcagaaatgagctgagaaaggagtgtgacgccctcaaagatccgctgaaggag
aagaagaagagggggagaacgtcaacaagtgaagcggagaaagagaaaacagcacttcaa
caatctctccaaacccagagtgccttgatgtcagagaaggacaaagaattaaactctctc
agacaacagacggcagatctgcgtggcacagtgcaggttctgcagtccgctgagaagtct
tacgagagcgagacacgacagctgcaggagcgagtcaaacatctggagaagaatgtctct
gacgctcatatcggcaaccagggagacgcctcctcggatgactctgtcgtgaatcagtgg
agggaagcaaaggagaacgctgagcgtcaggttgagttcctgaactcggttattgtggat
ctgcagaagaagaataatgagcagaaaggtaaacttgagaagatggctgaggctgcactc
aacggaaacagtgcaggtgacacagagacgcataacagtcatactgagacgacgaagaag
aaaccacctccccgtctcttctgtgacatctgtgattgctttgatctacacgacaccgag
gactgtcccacccaggaccagatgctcgactctccaccgcacaccacctatcacggcagt
cctcacgatgaaaggccttactgtgacatctgcgaggccttcggccactggacggaatcc
tgcaatgacgatcaaaccttctag
DBGET
integrated database retrieval system
