Triplophysa rosa: 130566539
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Entry
130566539 CDS
T09216
Symbol
hoxa4a
Name
(RefSeq) homeobox protein Hox-A4a
KO
K09304
homeobox protein HoxA/B/C/D4
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tros03000
]
130566539 (hoxa4a)
Transcription factors [BR:
tros03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
130566539 (hoxa4a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
DUF2209
PIRT
Motif
Other DBs
NCBI-GeneID:
130566539
NCBI-ProteinID:
XP_057210018
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Position
LG16:complement(6809743..6814423)
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AA seq
348 aa
AA seq
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MHYNIRSAGFSSFSLGIVAKLNCFRLYFEYKNRRIDRPNTFSLYCRPTCYWCLFTRCPQE
ALIGRIPHVTDQLCTFDRGVGGFWRDQKNDSTIKIRIVALYKLMIMSSYLINSNYIEPSF
PPCEEYQQNGYMPMPSDYYERPKDSGFPHHEEASFPRSNYQEPSYDYGNVTTNGINEFTD
RHHAQPQSVPQNHGPHLATESCAGSTENKDCSLVSEALPGAQKGKEPVVYPWMKKVHVNS
VTASYSGGVPKRSRTAYTRQQALELEKEFHFNRYLTRRRRVEIAHTMCLSERQVKIWFQN
RRMKWKKDHKLPNTKIRSSSSASSNHHVKTDATQQQQTLLPTPCSSNL
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgcattataacatacgttcagctggcttttcgtctttctctttaggaatagttgctaaa
ttgaattgttttcggttatattttgaatataaaaacagacgcatagaccgcccgaacaca
ttttcgttgtactgtcggccgacctgctattggtgcttgtttacacgatgcccacaggag
gcgctgattggtcgcattcctcacgtgaccgaccaactttgtacatttgacaggggagta
ggtgggttttggagagatcagaaaaacgacagcacgataaaaattagaattgttgcactt
tacaaattaatgatcatgagttcctacttgatcaattcgaattacatcgaaccttctttc
ccgccctgcgaagaatatcagcagaacggatacatgcccatgccctccgattattatgag
cggccgaaagactcgggcttcccccatcacgaggaggcatcattcccgcgatcaaactac
caggagccgagctacgattacggtaatgtgacaaccaacggcatcaacgagtttacagac
cgtcatcacgcacaacctcagtccgttccgcagaatcacggaccccacctcgctacagag
agctgtgctggttctactgaaaacaaggattgtagccttgtgtcagaagctctcccaggc
gcccagaagggtaaggagccggtggtgtatccctggatgaaaaaagtccatgttaattct
gtgaccgccagctactctggaggagtgcccaagaggtctcgcaccgcctacacacgccag
caggctcttgagcttgagaaagagttccactttaaccgatatttgactcgacgtcgacga
gtggagatcgcgcacactatgtgtctttctgagcgtcaggtgaaaatctggtttcagaac
cgccgtatgaagtggaagaaagaccacaagcttcccaacacaaagatccgttcatcgagc
tctgcgtcctccaaccatcacgtgaaaacggacgccactcagcagcagcaaacactactt
cctacgccgtgttcctcgaacctatag
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