Triplophysa rosa: 130566566
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Entry
130566566 CDS
T09216
Symbol
rnf115b
Name
(RefSeq) E3 ubiquitin-protein ligase RNF115 isoform X1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tros04131
]
130566566 (rnf115b)
04121 Ubiquitin system [BR:
tros04121
]
130566566 (rnf115b)
Enzymes [BR:
tros01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130566566 (rnf115b)
Membrane trafficking [BR:
tros04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
130566566 (rnf115b)
Ubiquitin system [BR:
tros04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130566566 (rnf115b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
Zn_ribbon_19
zf-RING_UBOX
zf-ANAPC11
zf-RING_5
DLIC
BDV_P10
Motif
Other DBs
NCBI-GeneID:
130566566
NCBI-ProteinID:
XP_057210078
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All DBs
Position
LG16:4622913..4627745
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AA seq
321 aa
AA seq
DB search
MAEAAAAPRHRYFCHCCKCEIDPKLPEYVCPRCESGFIEELSENNSLQRADGTGAGDEMT
SQFSELWQLLFMERSALLSDPTVTDVLRSRSGVEAAVGDPASGTVGPVVSTESSTDCTEP
SRLPQQSSHQRNPRLDQGQAMEGIVQQFLAGLFSNSDITGSQTSSWYVLLAVTSVFSVHD
MHFSFSLPLRSSMLHSNPQDYAWGQGGLDVVITQLLGQTECSGPPPAEKEMISSLPTISI
SSEQAACQLECPVCREEYSTGESVRQLPCLHCYHSNCIVPWLQLHDTCPVCRKSLDGEDC
GFQPPPRPNPSTPTIEEHSTL
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggctgccgcggctccacgacaccggtatttctgtcattgctgtaaatgtgaa
atcgatcccaaactcccggagtatgtgtgtcccagatgtgaatctggtttcattgaagag
ctttcggagaataacagtcttcagagagctgatggtactggtgcaggtgatgaaatgacc
tcacagttttcagagctgtggcagctgctcttcatggaacgttcagccctcctgtctgac
cccacggtcacagatgtcctccggagccgctctggggtcgaggctgcagttggtgatcct
gcctctgggacagtgggacctgtagtttccacagagtcttctacagactgcactgagccg
tcacgcctccctcaacaaagcagtcaccagcgaaacccaagactggatcagggacaggct
atggaggggattgtccagcagttcctggccggtctgtttagcaattctgacattactggt
tcccaaacatcttcgtggtatgttcttcttgctgtgacctccgtattcagtgtacatgac
atgcatttctcattctctctacctctcaggtcgagcatgttacactctaaccctcaagat
tacgcttggggacaaggaggcctagatgtggtcattacacagttgctcggtcagactgaa
tgtagcggtccccctcctgctgagaaagagatgatctcatctcttcccaccattagcatc
tcctcagagcaggctgcatgccagctggaatgccctgtgtgtagagaagagtattctaca
ggagaatctgtccggcagttgccctgtctgcactgctatcacagcaactgtatcgtgcct
tggctacaactgcacgacacctgtcccgtctgccggaaaagtctggatggtgaggactgt
ggtttccagccacctccgaggccaaacccctcaacaccgaccatagaggaacatagcact
ctttag
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integrated database retrieval system
