Triplophysa rosa: 130566594
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Entry
130566594 CDS
T09216
Symbol
jarid2b
Name
(RefSeq) protein Jumonji
KO
K11478
protein Jumonji
Organism
tros
Triplophysa rosa
Pathway
tros03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
130566594 (jarid2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tros03036
]
130566594 (jarid2b)
Chromosome and associated proteins [BR:
tros03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
130566594 (jarid2b)
Polycomb repressive complex (PRC) and associated proteins
PRC2.2
130566594 (jarid2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JmjC
ARID
JmjN
zf-C5HC2
Motif
Other DBs
NCBI-GeneID:
130566594
NCBI-ProteinID:
XP_057210157
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Position
LG16:17313213..17426447
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AA seq
1290 aa
AA seq
DB search
MSKERPKRNIIQKKYDDNDGMPWSEERVVRKVLYLSLKEFKSAQKRQICDGLSNGKSPNA
SLSKGQLNGCGSKGGHKEDGSRSQSTDGGSEYSEDYPAKKRPRLHAQRKFAQSQPNSPST
TPVKMADPSLPTPLTHITFLSRRRPKTEDFLTFICLRGSSALPGNVAYFGSSQDEEDLDD
EDEIEEEKPPSVASTSCQSTPKKGKPTGKINGFVLNGHKVHKEKEFATRSRGRESSVSRD
RGETCDASAVISHKQTEAMTKRHNTNGQYRRDELRKQVPKVNGLTRASSVGAKKSKDFRL
PSKTVNYTATVTKGHVTYTKAKRELVKKAKLNHSKHAGSAGLRAYSNNHHHHSYHPTSNG
HGRPQLSHSGKAQSISAKTRNQVLLSNGVHKVTNGGRLNGRINGRHSAREEEDDVRKVRQ
GLRNSKRRSEAAIAIVTECDEAKIKQPLTDAKKPKLQSSPLETRSKKALGQFKASGNVTI
AHSITEMAASPMQKTGPAPPPSSPAAPASPAMPQNPATPEPARQRPRRASAGKLMFIRQA
QQRAHTNPTLNRTTSTTSASKSFKPAELTATPPPRLERERERERSRAGWAALGDVPILKP
NSREFQDPLVYLDSVRERAETCGMCRVLPPSDWRPECKLNDEMRFVTQVQRIHKLGRRWG
PNVQKLACIKKHLKSQGISMDELPLIGGCEVDLARFSELVSDMGGMQQVMDLKKWSRLAD
LLRIPKSAQDRLAKLQEAYLQYLLSYDLLSPEEHRRLEQEVLAEKEAVERKWGPLEGHTD
SCQQSLSLPRYEPKKGLTGLNHRNGFRNHGKEPDTQRQVGRRRLFAQEKKGTVVADGEKA
DEAEDGVLSDQHKCIYKGRSVSLTTFYRIARNSMLMCFNKEPGAAEVEQDYWRTVEQRDC
HVAVHYGKVDTNTHGSGFPVAKTEPFSKHGWNLTVLPNNSGSILRHLGAVPGVTIPWLNI
GMVFSTSCWSQDQNRLPYMDYLHTGADCIWYSIPAEEKTKLDKVVHTLLQANGTPGLEML
EKNIMISPEVLCREGIKVYRTVQQSGQFVVVFPGAFVSRVCCGYSVSETVHFATPHWMNL
GYEAAKDLKCRRIAKPFSMEKLLYQIATAEAKRENRLVLSTISSLLKDLRNIEMKQRQEL
YEAGLLSSARYCTHDNNQSPADARKKPRKWLALESSERRCQTCQHLCYLSMVVQENENVV
FCLECALNHVEKNKSCRGLKMMYRYDEEQINSLVSQVCGKALLRNTSDVCKGSSPTKSPA
KRRPRKSSAVEGTLTHLPNHLSKSATAAVS
NT seq
3873 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaggaaagacctaagaggaatatcattcagaagaaatacgatgataatgatggg
atgccctggtcggaggagcgggtggtgcggaaggtgctttatctctcgctgaaggagttt
aagagcgcacagaagcggcagatctgtgacggcctcagcaatggaaaaagccccaacgct
tccttgtcaaaagggcagctgaatggatgtgggtctaaaggaggacataaggaggacggg
tcacgctctcagagtacagatggaggcagtgagtattctgaggactacccggccaaaaag
aggcccagactgcatgcgcagaggaagttcgcccagtctcaacccaactctcccagcacc
accccagtgaagatggccgacccctctctgcccacgccgctcacgcacatcacattcctc
tccagacgcaggcccaagacggaggatttcctcaccttcatatgccttcgaggctcgtcg
gcattacctggtaacgtggcctactttgggagttcccaggatgaggaggatctggatgac
gaagatgagattgaagaggagaaaccgcccagtgtggcatccacatcatgtcagtctaca
cccaagaagggcaaaccgaccggcaagatcaatggattcgtgttgaatggtcataaggta
cacaaggagaaagagtttgcaaccagatccagaggcagagagtcatcagtgagcagagat
cgtggcgagacgtgtgacgcatcggctgtgatctcccataagcaaacagaagccatgacc
aagaggcacaacaccaatggccagtacagaagagatgaactacgcaagcaggtcccaaaa
gtaaacggactcacacgggcatcatcagtcggtgccaaaaagtcgaaagacttccgcctg
ccgtccaaaactgtgaactacacagccaccgtgaccaagggccacgtcacctacaccaaa
gcaaaacgagaactggtgaagaaagccaaactcaaccacagcaagcacgctgggtccgct
ggcctccgtgcttacagcaacaaccaccaccatcattcttatcatccaaccagcaatggc
cacggccggccccagctctctcactcaggaaaagcccaaagtatcagtgcaaaaacccgc
aaccaggtgctattgtcgaacggggtgcataaggttactaacgggggccggcttaatggc
agaattaacggacgccacagtgccagggaagaagaggacgatgtccgaaaggtgcgacag
ggtctgcggaactccaaacgcaggagtgaggcggccatcgcgattgtcacggagtgtgat
gaggctaaaatcaaacagcctcttactgacgctaagaaacccaaattgcagtccagtcct
ttggaaacacgcagcaaaaaagcccttggccagttcaaagcctcgggcaatgttactatt
gcacacagtatcactgaaatggccgcttcccccatgcagaaaacgggtcccgcacctcct
ccctcttcccccgctgctccggcctcccccgccatgccccaaaaccctgcaacccctgag
ccggcacgtcaacggcccagacgtgcttctgctggcaagctgatgttcatcaggcaagca
cagcagagggcccatactaaccccaccctcaaccggaccacatccactacctcagccagc
aagtccttcaaaccagcagagctcacagccacacccccgccgcggctggaaagggagcgg
gaacgggagaggagcagggcggggtgggcggccctgggcgatgtgcccattttgaagccc
aactcaagggagtttcaggaccctttggtgtacctcgattcagttcgggaacgggcagag
acgtgtggaatgtgcagagtgctgccgccttctgactggaggccggagtgcaaactgaat
gatgagatgcgttttgtgacgcaggttcagcgcatccacaaactgggtcggcgctggggt
ccgaatgttcagaaactggcctgcataaagaagcacctcaaatctcagggcatctcaatg
gatgagctgccacttataggtggctgtgaagtagacctggctcgcttttccgagctggtc
agcgacatgggcggaatgcagcaggttatggacttgaaaaagtggagccggctggccgac
ctgctccgcattcccaaatcagcacaggaccgtctggccaagctccaggaagcctacctg
caatacctgctttcctacgaccttctctctcccgaggagcaccggcgactagagcaggag
gtgttggcagaaaaagaggctgtggaacgcaagtgggggcccctggagggtcacacggat
agctgccagcagtccctctctttgccccgctacgagcccaagaaagggctcaccggcctc
aaccaccgcaacggcttccggaaccacggcaaagagccagacacccagcggcaggttggc
cgccgcagactgtttgctcaggaaaagaaagggacggtggtggcggacggtgaaaaggca
gatgaggcggaagatggtgttctcagtgaccagcacaaatgtatatacaaggggagatca
gtatctttgaccaccttttacagaatagcaagaaattctatgttgatgtgcttcaacaag
gagcctggggctgctgaagttgagcaagattactggcggacagtggagcagagggactgc
catgtagcagtgcattatgggaaagtggacacaaacacacatggaagtggattccctgtg
gccaagactgaacccttctccaagcatggatggaacctcactgtccttcccaataactct
ggatccattctgcgccatcttggtgctgtgcccggggtgactattccctggctgaacatt
ggcatggtcttttctacctcatgctggtcacaagaccaaaaccgccttccatacatggat
tacttacacactggtgctgattgcatttggtattctattcctgctgaggaaaagacaaag
cttgataaagtggtgcacacgctgctacaggccaatggtacaccaggactggaaatgctg
gagaagaatattatgatttctccagaggtgctgtgtcgcgaggggataaaggtctaccgt
acggtccagcagagcgggcagtttgtggtggtcttccccggagcgttcgtgtccagggtg
tgctgtggctacagtgtatctgagactgtgcactttgccaccccgcattggatgaacctt
ggctacgaggctgcgaaggacctgaaatgcaggcgcatagccaaacccttctccatggag
aagctcctctaccagatcgccaccgccgaggccaaacgagaaaacagacttgtactcagt
acaatctcttctcttcttaaagatctcaggaacatagaaatgaagcaaaggcaggagctg
tatgaagcagggctgctctcttctgcgcgatactgcactcacgacaacaaccaatcacct
gcagacgcccggaagaaaccgcgcaagtggctggcgctggagtcatcggagagacgctgc
caaacgtgccagcatctctgttacttgtctatggtggtgcaggagaatgaaaacgttgtc
ttctgtctggagtgtgcgttgaaccatgtggagaaaaacaaaagctgtcggggactcaag
atgatgtaccgctatgatgaggagcagatcaacagtttggtgagtcaggtgtgcggtaaa
gccctgctgagaaacacatcagacgtctgcaaaggctccagccccaccaaatccccagcc
aagcgccgccctcgcaagagctccgccgtagaggggacgctcacccacctgcccaaccac
ctgtccaaaagtgccactgctgcagtctcatga
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