Triplophysa rosa: 130566598
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Entry
130566598 CDS
T09216
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain 1 isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
tros
Triplophysa rosa
Pathway
tros04145
Phagosome
tros04814
Motor proteins
tros05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
130566598
09142 Cell motility
04814 Motor proteins
130566598
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
130566598
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tros03036
]
130566598
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tros04812
]
130566598
Chromosome and associated proteins [BR:
tros03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
130566598
Cytoskeleton proteins [BR:
tros04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
130566598
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
Beta-prop_EML
WDR55
Dynein_IC2
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_HPS5
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
WD40_RFWD3
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
130566598
NCBI-ProteinID:
XP_057210163
LinkDB
All DBs
Position
LG16:complement(9889754..9943927)
Genome browser
AA seq
628 aa
AA seq
DB search
MADKSDLKAELERKKQRLAQIREEKKRKEEEKKKKESETQQKVEAAPEDSDLDRKRRETE
ALLQSIGISPEPPLVPTPMSPSKSMSTPSETGSQDSVDATAAGRTLQWDTDPSVLQLQAD
SELGSRTHRLGPSKIIQVDFLPKEVVSYCKETQTPLAAHQSEEDEEEDEEVTEPKVGTET
EQQEEEESKDTKDGHPRELTEEERQQALHSEEFLIFFDSSIRVMERALAEDSNIFFDYSG
RDLDDKEGDLQGGSSLSLSRLFYDERWSKRRVITCLDWSPQYPELLVASYNNNEDAPHEP
DGVALVWNMKFKKTTPEYIYHCQSPVVSVGFARFHPNLLVGGTYSGQIVLWDNRSHRRTP
VQRTPLSAAAHTHPVYCVNVVGTQNANNLITVSTDGRMCSWSLDMLSQPQESMELVYNKS
KPVAVTGMAFPTGDVNNYIVGSEEGTVYTASRHGSKAGICEMFEGHQGPVTGISCHSAVG
PVDFSHLFVTSSFDWTVKLWSTKQNKPLYSFEDNSDYVYDVMWSPVHPSLFAAVDGMGRL
DLWNLNNDTEVPTASVTIEGAPALNRVRWASGGKEVAVGDSEGRVWIYDVGEMAVPHSED
WAHFARTLVEIRANHGDGEEEGPGELST
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atggccgataaaagtgacttaaaagccgaacttgagcgcaaaaagcagcgcctcgctcag
atcagagaagaaaaaaagagaaaggaggaagaaaaaaagaaaaaagagtcagagacacaa
cagaaagtggaagctgcccccgaagattcagatttggaccgtaaacgcagagagaccgag
gccctccttcagagtattggaatctcacccgaacctccattagtcccaacacctatgtcc
ccatcaaagtctatgagcacgcccagtgaaacaggcagtcaggactcagtggatgcgact
gcagctggaaggaccctgcagtgggacactgacccttctgttctccagctgcaggctgac
tctgaactcgggagtcgaacacacaggttgggaccatctaaaataatacaggtggacttc
cttcccaaagaagtggtgtcttactgcaaagagactcagactcctcttgcagcccatcaa
tctgaagaagatgaagaagaggatgaggaggtcacagaaccaaaagttggaacggaaact
gaacagcaggaagaggaagaaagcaaggacaccaaagacggtcacccgcgggaactgacg
gaggaagagaggcagcaggctctgcactcagaggagttcctcatatttttcgacagcagc
attcgcgtgatggagagagctttggctgaggactccaacatctttttcgactacagcgga
cgtgacctggatgacaaagaaggagatctgcagggtgggtctagtctctctcttagtcgt
ctgttctatgatgagcgctggtcaaagcgccgggtcatcacctgtctggactggtcccct
cagtaccccgagctcttggtggcttcctacaacaacaatgaagatgcacctcatgagcca
gatggtgtggctttggtgtggaatatgaaattcaagaagaccacaccagagtacatctac
cactgccagtctccagtggtgtcagtgggttttgcacggttccatcctaacctgttggtt
ggtggcacttactcagggcagattgttctgtgggacaaccgaagccacagaagaacacca
gttcagcggaccccactgtctgctgcagcgcatacacaccctgtgtactgtgtaaatgtg
gtcggcacccaaaatgccaacaacctgatcactgtgtccacagacggaaggatgtgctcg
tggagtttggatatgctgtcacagcctcaggagagcatggagctggtatataataagtca
aagccggtggctgtaactgggatggcattccccactggagacgtcaataattatatagtt
ggcagtgaggagggaaccgtgtatacagcatcaagacatggcagtaaagccggtatctgt
gagatgtttgagggccatcaggggccagtgacaggcatcagttgtcacagtgccgtgggc
cccgtcgatttctctcacctgtttgtcacctcgtcttttgactggactgtgaaattgtgg
agcacaaagcaaaacaagccactctactcttttgaggacaattccgactacgtctacgac
gtgatgtggtcgcccgtgcacccctcgctcttcgccgccgtggacggcatgggtcgtctg
gatctgtggaacttgaacaacgacactgaggtgcccactgctagcgtgactatagagggc
gctcctgcgctcaatcgcgtcagatgggcgtctgggggaaaggaagtggctgtgggagat
tcagaggggcgtgtctggatttacgacgttggagagatggccgtgccccatagtgaggac
tgggcccatttcgctcgtacgctggtggaaatccgtgccaaccatggagatggtgaggag
gagggacccggggagctgtcgacgtaa
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