Triplophysa rosa: 130566734
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Entry
130566734 CDS
T09216
Symbol
rxrba
Name
(RefSeq) retinoic acid receptor RXR-beta-A isoform X1
KO
K08525
retinoid X receptor beta
Organism
tros
Triplophysa rosa
Pathway
tros03320
PPAR signaling pathway
tros04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
130566734 (rxrba)
03320 PPAR signaling pathway
130566734 (rxrba)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tros03000
]
130566734 (rxrba)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
tros03310
]
130566734 (rxrba)
Transcription factors [BR:
tros03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
130566734 (rxrba)
Nuclear receptors [BR:
tros03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
130566734 (rxrba)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
C1_2
Motif
Other DBs
NCBI-GeneID:
130566734
NCBI-ProteinID:
XP_057210414
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Position
LG16:complement(3893509..3907559)
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AA seq
480 aa
AA seq
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MGDSRDSRSPDSSSVSSPPSGQRSPPLAPSAAAMTSLPPITSAVNSPISSMGSPFSVISS
SLGSPCLPGTPSVGYGPISSPQMSMFPRNMEINSTVSMSGLHAVSSSDDVKPPFGLKPLS
GHSPGPMVSQKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLSYTCRDNKDCLVDK
RQRNRCQYCRYQKCLAMGMKREVVQDERQRSVQEERQRNKEREGEVESTSAANEEMPVEK
ILEAEMAVEQKTELHADGSSEGSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSELSLDD
QVILLRAGWNELLIASFSHRSIAVKDGILLATGLHVHRNSAHSAGVGAIFDRESAHNAEV
GAIFDRVLTELVSKMRDMQMDKTELGCLRAIILFNPDAKGLSSPSEVELLREKVYASLEA
YCKQRYPDQQGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQLT
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacagcagagattcccgaagtccagacagctcgtccgtatcttcaccaccatca
ggtcagcgttcaccaccactggctccatcagccgccgccatgacttctctgccacccatc
acatctgcggtgaacagtcccatcagcagcatgggttctcccttctcagtcatcagctcc
tctctgggttctccctgccttcctggaactccttcagtgggctatggccccatcagcagc
ccacagatgagcatgtttcccagaaatatggagatcaactcgaccgtgtccatgtcgggc
ctgcacgctgtcagcagctctgatgatgtgaagccgccctttggtttgaaaccactgtcc
ggccacagccccggacccatggtctcacagaaacgcttgtgtgccatttgtggtgaccgc
tcatctggtaagcactatggcgtttacagctgcgaaggctgcaagggctttttcaagcgc
accgtgaggaaggacctaagctacacgtgcagggacaacaaagactgtctggtggacaaa
cgtcagaggaaccgctgccagtactgccgctaccagaagtgcctggccatggggatgaag
cgagaggtggtccaagatgaacgacagcgatccgttcaggaagagcgtcaaaggaacaag
gagcgagaaggcgaggtggagtccaccagcgccgccaatgaagaaatgccagtggagaag
attttggaggccgaaatggcagtggagcagaagaccgagctgcatgcagacggcagctct
gagggcagttctccaaatgacccggtcactaatatctgccaggctgctgataaacagctc
tttactctggttgaatgggcgaaacggatccctcacttcagtgaactctctctggatgac
caggtcatcctcctgcgagccggctggaatgagctcctgatcgcttcattctctcatcgc
tccatcgcggtgaaggatggcattctgttggccaccggcctccacgtgcacaggaacagt
gctcacagcgctggagtgggggccatctttgacagggagagtgcgcacaatgcagaggtt
ggggccatattcgacagggtgctaacggagctggtgagcaagatgagggacatgcagatg
gacaaaacagagttgggatgtttgagagccatcatcctcttcaacccagatgcaaagggt
ttgtcaagcccaagtgaggtggagttgctgagagagaaagtctatgcatcgctggaggct
tactgtaaacagagatatcctgaccagcagggcagatttgctaagctcctcctccggctg
ccagcgctgcgttccattggcctgaagtgtctggagcacctgttctttttcaagctgatc
ggcgacaccccaatcgacaccttcttaatggagatgcttgaagcccctcatcagctgacc
taa
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