Triplophysa rosa: 130566787
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Entry
130566787 CDS
T09216
Symbol
top3b
Name
(RefSeq) DNA topoisomerase 3-beta-1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
tros
Triplophysa rosa
Pathway
tros03440
Homologous recombination
tros03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
130566787 (top3b)
03460 Fanconi anemia pathway
130566787 (top3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tros03032
]
130566787 (top3b)
03400 DNA repair and recombination proteins [BR:
tros03400
]
130566787 (top3b)
Enzymes [BR:
tros01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
130566787 (top3b)
DNA replication proteins [BR:
tros03032
]
Eukaryotic type
DNA Topoisomerases
130566787 (top3b)
DNA repair and recombination proteins [BR:
tros03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
130566787 (top3b)
FA (Fanconi anemia) pathway
130566787 (top3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_TOP3B
Toprim
Motif
Other DBs
NCBI-GeneID:
130566787
NCBI-ProteinID:
XP_057210546
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Position
LG2:32089450..32101896
Genome browser
AA seq
860 aa
AA seq
DB search
MRTVFMVAEKPSLAQSIAKILSKGSCLTRKGLNGACSVHEYTGNFEGQNMRFKMTSVCGH
VMSLDFIGKYNNWDKVDPAELFSKAPTEKKEANPKLNMVKFLQVEAKGCDYVVLWLDCDK
EGENICFEVLDAIQPFMNKSYGHECTVYRAKFSSITDTDICNAMNRLGEPNKNEALSVDA
RQELDLRIGCAFTRFQTKYFQGKYGNLDSSLISFGPCQTPTLGFCVDRHDKIQSFKPESY
WVVQAKVFKGKDSPLTLDWDRVRVFDRDVGQMFVNIAKTAKEAKVDSVTKKEKAKQRPLA
LNTVEMLRVGSSALGMGPQHTMQIAERLYTQGYISYPRTETTHYPENFDLKSTLRQQANS
SFWGETVKALISEGINRPRKGADAGDHPPITPMRAASESELGSDGWRLYDYITRHFIATV
SHDCKFLQTTISFSIATETFTCTGKTLISAGYTEVMPWQGIPLEEALPVCERGDTFTVDE
IKLLEKQTNPPDYLTEAELITLMEKHGIGTDASIPVHINNICQRNYVTVETGRKLKPTNL
GIVLVHGYYKIDADLVLPTIRSAVEKQLTLIALGKANFDQVLQHTLDIFKRKFHYFVDSI
SGMDELMEVSFSPIAATGKPLSRCGKCHRFMKYIQAKPSRLHCSHCDETYSLPQNGAIKL
YKELRCPLDEFELVLWTSGSRGKSYPVCPYCFSNPPFRDMKKGMGCNECTHPSCQHSLNS
LGIGQCVECETGVLVFDPTPGPKWRMSCNKCNVVVHFFENAHKVQVSQDSCESCEASLVS
VDFKTRSPFPDGDTQHTGCVFCDPAFQDLVELKHATMRHPMHRAGGARRGRGKGRGRRPV
GRGNPKKPKDKMAALAAYFV
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atgaggactgtgttcatggtggctgagaagccctctcttgctcagtctattgccaaaatc
ctctctaaaggtagctgtttaacccggaagggactgaacggagcatgctcagtccacgag
tacactggaaacttcgagggccaaaacatgaggttcaagatgacatcagtgtgcggacac
gtcatgagtctggacttcatcggaaaatataacaactgggataaagtcgatccagccgag
ctgttcagtaaagcaccgactgagaagaaggaagcaaaccccaaactaaatatggtcaaa
ttccttcaggttgaagctaaaggttgtgattatgttgtcctgtggttggactgcgataaa
gaaggagaaaacatttgttttgaggtgttggatgccattcagccgtttatgaataaatct
tacggtcatgagtgtaccgtgtaccgggccaagttcagctccatcacagacactgatatc
tgcaacgcaatgaaccgactcggagagcccaacaagaacgaagctttgtctgtagacgca
cgtcaagaactggacctcagaatcggctgcgctttcacacgtttccagaccaagtacttc
cagggaaaatatgggaatttggactcctctttgatttccttcggcccctgtcagaccccc
acactgggtttctgtgtggatcgtcatgataagatccagtccttcaaacccgagtcatac
tgggttgttcaggcaaaggtttttaaggggaaggacagcccgctcacattggactgggac
cgtgtgcgagtatttgaccgtgatgttggtcagatgtttgtcaacatcgcaaaaacagca
aaggaggctaaggttgattctgtgacgaagaaggagaaagccaagcagagacctcttgca
ttaaacacagtggagatgttaagagtcggcagctctgctttaggaatgggtccccagcac
actatgcagatagcagaacgtctctacacgcagggttacatcagctaccctcgtacagag
actacacattaccctgagaactttgacctcaagagcaccctcagacaacaggccaacagc
tccttctggggcgaaacggttaaagctctgatctcagagggcattaacaggccgaggaaa
ggggcggatgctggagatcacccaccgatcacacctatgagagcggcgtctgagagcgag
ctggggagtgacggttggcgtctgtacgattacatcacacgtcacttcatagcgacggtc
agccacgactgtaaatttctccagaccacgatatctttcagtatcgccacagagacgttc
acatgcaccggaaagacgctcatttctgctgggtacactgaggtgatgccctggcagggt
attccactggaagaggctttacccgtgtgtgagagaggagacacttttacagtggacgag
atcaaactgctggagaaacaaaccaatccaccagattacctcactgaggccgagctcatc
acactgatggagaaacacggcatcggtacggatgccagcatccctgtccacattaacaac
atctgccagaggaactacgtgactgttgaaactggccgtaaactcaaacccaccaacctg
ggaattgttctggttcacggttactataaaattgatgcagatttggtcttgcccactatc
cggagcgctgtggagaagcagctgactctgatcgctttaggaaaagcaaactttgatcag
gtcttgcagcacactctggatatattcaagaggaagtttcactactttgtggactcgatt
tctggtatggatgaattaatggaggtgtcgttctctccgatcgctgccacggggaagcca
ctgtctcgatgtggcaagtgccatcgcttcatgaaatacatacaggctaaacccagtcgc
ctgcactgctcgcactgcgatgagacctacagtttaccacagaacggagcaataaaactg
tacaaggagctgaggtgtcctctagatgagtttgagctggtgctctggacgtcaggatct
cgaggcaaaagctaccctgtgtgtccatactgcttcagcaatcctccctttagagacatg
aagaaaggaatgggctgtaatgaatgcacccacccgtcctgtcaacactccctcaactct
ctcggcattggtcagtgcgtcgaatgcgagacgggcgtcctcgtcttcgatcccacccct
gggccgaagtggcgcatgtcttgcaacaaatgcaacgtggtggtgcatttcttcgagaac
gcacataaagtacaggtgtcccaggacagctgcgagtcctgcgaagcctccctggtctct
gtggactttaagacgcgctcgccgtttcctgacggtgatactcagcacaccggctgcgtg
ttttgcgaccctgcgttccaggatcttgtggagttgaaacacgcgaccatgcggcatcct
atgcaccgggcaggaggggcacggagagggagggggaagggacgagggaggagaccggtg
gggagagggaatcctaaaaaacccaaggataaaatggcagcgttggctgcgtattttgta
tag
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