KEGG   Triplophysa rosa: 130567013
Entry
130567013         CDS       T09216                                 
Symbol
col1a2
Name
(RefSeq) collagen alpha-2(I) chain
  KO
K06236  collagen type I alpha
Organism
tros  Triplophysa rosa
Pathway
tros04510  Focal adhesion
tros04512  ECM-receptor interaction
tros04518  Integrin signaling
tros04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:tros00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    130567013 (col1a2)
   04518 Integrin signaling
    130567013 (col1a2)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    130567013 (col1a2)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    130567013 (col1a2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:tros00536]
    130567013 (col1a2)
Glycosaminoglycan binding proteins [BR:tros00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   130567013 (col1a2)
SSDB
Motif
Pfam: Collagen COLFI
Other DBs
NCBI-GeneID: 130567013
NCBI-ProteinID: XP_057210867
LinkDB
Position
LG16:complement(10032344..10050474)
AA seq 1352 aa
MLSFVDTRILLLLAVTSYLASCQSGPRGPKGPRGDRGPKGPNGKDGRPGFPGPPGPPGSP
GLGGNFAAQYDGAKGPEPGPGPMGLMGPRGPAGPPGTPGPQGFQGHAGEPGEPGQGGPVG
ARGPPGPPGKNGEDGNNGRPGKPGDRGTPGPQGARGFPGTPGLPGMKGHRGYNGLDGRKG
EPGAAGSKGENGATGANGTPGQRGGRGLSGERGRAGQAGPAGARGADGNTGPSGPAGPLG
SAGPPGFPGAPGPKGEVGPAGASGPSGPQGQRGEPGQNGAVGPVGPLGNPGANGINGAKG
AAGAPGIAGAPGFQGPRGGPGPQGPSGASGPRGLAGDPGPVGVKGDSGVKGEPGMVGPSG
APGPAGEEGKRGTTGEQGSTGPAGLRGPRGAAGTRGLPGLAGRSGPMGMPGARGATGTAG
ARGPPGDAGRAGEPGLTGARGLPGSPGSSGPPGKEGPVGTSGQDGRTGPPGPTGPRGQPG
NIGFPGPKGPGGESGKPGEKGPSGPAGLRGLPGSDGNNGPSGPVGLLGATGEKGEQGPSG
APGFQGIPGPAGLVGEAGKNGERGIPGDQGASGPAGVKGERGNPGLTGGAGSQGQIGNRG
PAGAPGPDGNKGEPGAVGTAGSPGHQGAAGMPGERGAGGTPGPKGEKGEGGYRGLEGNMG
RDGSRGAPGPSGPPGPAGANGDKGESGSFGPPGPPGARGTPGERGESGPAGPSGFAGPPG
ADGQTGQRGEKGPAGGKGDIGPSGLSGPAGNSGPPGPTGLAGSPGGRGDTGPSGLTGFPG
PAGRVGPPGPAGIVGPSGLTGPSGKDGPRGPRGEVGPAGPPGENGMVGPPGLFGEKGPSG
ETGTAGAPGTAGPQGQLGSLGFNGLPGARGDRGLPGGPGGVGEPGRLGPAGAPGARGPAG
NIGMPGMTGPQGEAGREGSPGNDGPPGRPGAAGLKGDRGEPGSPGPAGLSGNPGPLGPSG
SVGRPGNRGESGPSGSSGPVGPAGARGAPGPAGPRGEKGVAGEKGERGMKGLRGHPGLQG
MPGPNGPSGDSGPVGISGPAGPRGPAGPNGPPGKDGSSGMPGPIGPPGHRGPSGHVGPVG
PPGTPGLPGPAGPAGGGYDTSGGYDEYRADQASLRAKDYEVDATIKSLNTQIDNLLSPEG
SKKNPARTCRDIRLTHPDWSSGFYWIDPNQGCTMDAIKAYCDFTTGHTCIYPHPESIPRK
NWYRSSQEKKHVWFGETINGGTEFGYNDETLSPQSMATQLAFMRLLANQAVQNITYHCKN
SIAYMDAENGNLKKAVLLQGSNDVELRAEGNSRFTFNVLEDGCSRQTGQWSKTVIEYRTN
KPSRLPILDIAPLDIGGADQEFGLDIGPVCFK
NT seq 4059 nt   +upstreamnt  +downstreamnt
atgctcagctttgtggatacccggattctgttgctgcttgcagtgacttcgtatctagca
tcatgtcaatcaggccccaggggaccaaaaggacccagaggtgacaggggtcctaaagga
ccaaatggaaaagatggcagacctggatttcctgggccacccggtcctcccggctcccct
ggtcttggtggaaactttgctgctcagtatgatggcgctaaaggacccgagcctggacct
ggacctatgggtttgatgggacctagaggccccgctggacctcctggtacccctggacct
caaggattccaaggacacgctggtgagcccggagagccaggacagggtggacccgttggt
gctcgtggccctcctggccctcctggcaaaaatggtgaagatggtaacaatggccgacct
ggaaaacctggtgatagaggaacccctggacctcagggtgcccgtggtttccccggaact
cctggccttcctggaatgaagggacacagaggttacaatggtcttgatggacgtaaagga
gagcctggtgcagctggttctaagggagaaaatggcgctactggagcaaatggaacccct
ggacagagaggtggtcgtggtctttctggtgagagaggtcgtgctggccaagctggtcca
gctggtgcccgcggtgctgatggcaacactggtccttctggccctgctggtcccttggga
tcagctggtcctcctggttttcctggtgcccctggacctaagggagaggttggacctgct
ggtgcctctggcccatctggacctcagggacaaagaggagagcctggtcaaaatggtgct
gttggcccagtcggaccccttggtaatcctggtgctaatggtatcaatggtgctaaggga
gcagctggtgcaccaggaattgctggcgcccctggtttccaaggccctagaggaggacct
gggccccagggaccttctggagcctctggccctagaggtcttgctggtgaccccggccct
gttggagtgaagggagattctggtgttaagggtgagcctggtatggtgggtccttctggt
gctcctggtcctgctggtgaagagggcaagagaggcacaactggtgagcagggatctact
ggacctgctggtttgcgtggaccaagaggagctgctggtacccgtggtcttcctggcctg
gctggaagatcaggaccaatgggcatgcctggagcccgtggtgccactggtaccgccgga
gctcgtggacctcctggagatgctggtcgtgctggtgagcctggtcttactggagctaga
ggtctccctggaagccctggcagttctggaccccctggaaaggaaggacctgttggtacc
tctggtcaagatggccgcactggcccccctggcccaactgggccaagaggtcagcctggt
aacattggattccctggtcctaagggacccggtggtgagtctgggaaaccaggtgagaaa
ggaccttctgggcctgctggactgagaggtctccctggatctgatggtaacaacggccct
agtggtccagttggacttttgggtgccacaggtgagaaaggagaacagggaccctctggt
gctcctggtttccagggtattcctggccccgctggacttgttggtgaggctggcaagaac
ggagaaagaggtatccctggagatcaaggtgcatcaggacctgctggtgtgaagggagag
cgtggtaaccccggactcactggaggtgctggttctcagggacaaatcggtaaccgtggc
ccagctggtgctcctggccctgatggaaacaagggagagcctggtgctgttggaactgct
ggttcccctggacaccagggagcagctggtatgcctggtgagcgtggtgctggcggcact
cctggacctaagggtgagaagggtgaaggtggatatagaggactggagggcaatatggga
agagatggttcccgtggtgctcctgggcccagtggaccccctggacccgctggtgctaat
ggtgacaagggtgagagtggctccttcggtcctcctggacctcctggtgctcgtggtact
cctggagagcgtggtgagtctggccctgctggaccttccggttttgctggaccccctggt
gctgatggccagaccggacaaagaggtgagaaaggccctgctggtggaaaaggtgacatt
ggaccttccggcctttctggtcctgctggcaattctggacctcccggccctactggcctt
gctggctcacctggtggccgtggtgacaccggtccctctggtctgactggtttccctggt
cctgctggcagagttggaccacctggccctgctggtattgttggaccttctggtctcact
ggtccttctggaaaagatggcccccgtggacctcgtggtgaagttggccctgctggtccc
cctggagagaacggaatggttggacctcctggcctttttggtgagaagggaccctctgga
gagaccggtacagctggagcacctggaactgctgggcctcagggtcagctgggatctcta
ggattcaatggacttcctggtgccagaggtgaccgtggtcttcctggtggccccggtggt
gttggtgagcctggtagacttggccctgctggtgcccctggtgcacgtggtcccgctggc
aacatcggcatgcccggtatgactggacctcagggtgaagctggacgtgagggaagccct
ggtaacgatggacctcctggccgtcctggtgctgctggcctgaagggtgaccgtggtgag
cctggttcccccggacccgctggactttctggtaaccctggaccccttggaccatcaggc
tctgttggcagacccggaaaccgtggtgaatctggaccctctggttcttctggacccgtt
ggacctgctggagcaagaggtgcacctggacctgctggccctcgtggtgagaagggtgtt
gcaggagaaaaaggagaaaggggcatgaagggacttcgtgggcatcctggtctgcaggga
atgcccggacccaatggtccttccggtgactctggccctgttggtatttctggacctgct
ggtccaagaggcccagctggtcccaacggcccccctggtaaggatggttcaagtggcatg
cctggtcctattggaccccctggacaccgtggtccttccggacatgttggacctgttggt
cctcctggaactcctggtcttcccggacccgctggcccagctggtggtggatatgacacc
tctggtggctatgatgagtacagagctgaccaggcctctctcagggccaaggactatgag
gtggatgccaccatcaagtctttgaacactcagattgacaatctgctctctcctgaggga
tccaagaagaaccctgcccgtacctgccgtgacatcagactcacccacccagattggagc
agcggcttctactggatcgaccccaaccagggctgcaccatggatgccatcaaggcctac
tgcgacttcaccactggccacacctgcatctacccccaccccgagagcatcccacgcaag
aattggtacagaagctcccaggagaagaaacacgtttggtttggcgagaccatcaatggt
ggtactgagtttggctacaatgacgagaccctaagcccacagtccatggctactcagctg
gctttcatgcgtcttctggccaaccaggcagtccagaacatcacctaccactgcaagaac
agcattgcctacatggatgctgagaatggaaacctgaagaaggctgtgttgctgcagggc
tccaacgatgtcgagctcagggcggagggcaacagccgatttactttcaacgtcctggag
gatggatgcagtagacaaactggccagtggagcaagacagtcattgaatacagaacaaat
aaaccatctcgtcttcccatcctcgacattgcacctttggacattggtggcgcagatcaa
gaatttggtttggacattggcccagtctgtttcaaataa

DBGET integrated database retrieval system