Triplophysa rosa: 130567052
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Entry
130567052 CDS
T09216
Name
(RefSeq) elongation factor 1-alpha
KO
K03231
elongation factor 1-alpha
Organism
tros
Triplophysa rosa
Pathway
tros03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130567052
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tros03019
]
130567052
03016 Transfer RNA biogenesis [BR:
tros03016
]
130567052
03012 Translation factors [BR:
tros03012
]
130567052
04131 Membrane trafficking [BR:
tros04131
]
130567052
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tros04147
]
130567052
Messenger RNA biogenesis [BR:
tros03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
130567052
Transfer RNA biogenesis [BR:
tros03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
130567052
Translation factors [BR:
tros03012
]
Eukaryotic type
Elongation factors
130567052
Membrane trafficking [BR:
tros04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
130567052
Exosome [BR:
tros04147
]
Exosomal proteins
Proteins found in most exosomes
130567052
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Motif
Other DBs
NCBI-GeneID:
130567052
NCBI-ProteinID:
XP_057210927
LinkDB
All DBs
Position
LG16:complement(8998552..9001922)
Genome browser
AA seq
462 aa
AA seq
DB search
MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAGGV
GEFEAGISKNGQTREHALLAFTLGVKQLVVGVNKMDSTEPPYSQARFEEITKEVSAYIKK
IGYNPASVAFVPISGWHGDNMLEPSSNMGWFKGWKVERKEGNGSGVTLLDALDAILPPSR
PTNKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPANVTTEVKSVEMHHESLA
EATPGDNVGFNVKNVSVKDIRRGNVAGDSKNDPPMEAGSFTAQVIILNHPGQISQGYAPV
LDCHTAHIACKFAELKEKIDRRSGKKLEDNPKALKSGDAAIVEMVPGKPMCVESFSTYPP
LGRFAVRDMRQTVAVGVIKSVEKKSASAGKVTKSAQKAAKTK
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaggaaaagacccacattaacatcgtggtcattggccacgtcgactccggaaag
tcaaccacaaccggccatctcatctacaaatgcggtggaatcgacaagagaaccatcgag
aagttcgagaaagaagctgctgagatgggcaaaggctctttcaagtatgcttgggtgctg
gacaaattgaaggcagagcgtgagcgtggtatcaccattgacatcgctctctggaaattc
gagaccgcaaaatactatgtcaccatcattgatgcccctggacacagagatttcatcaag
aacatgatcactggtacatcccaggctgactgtgccgtgctcattgttgctggtggtgtt
ggtgagtttgaggctggtatctcaaagaacggacagacccgtgagcatgccctcctggct
ttcaccctgggtgtgaaacagcttgttgttggcgttaacaagatggactccaccgagcct
ccttacagccaggctcgttttgaggaaatcaccaaggaagtcagcgcatacatcaaaaag
atcggctacaaccctgccagtgttgccttcgtcccaatttctggatggcatggtgacaac
atgttggagcccagctcaaatatgggctggttcaagggatggaaggttgagcgtaaggag
ggtaatggtagtggtgttactcttcttgatgccctggatgccattttgccacccagccgc
cccactaacaagcccctccgtctgccacttcaggatgtctacaaaattggaggtattgga
acagtgcccgtgggtcgtgtggagactggtgtcctcaagcctggtatggttgtgaccttt
gctcctgctaatgtgaccactgaggttaagtctgttgagatgcaccacgagtcccttgct
gaggctacacctggtgacaatgttggcttcaacgttaagaacgtgtccgttaaggatatc
cgtcgtggtaatgtggctggagacagcaagaacgacccccctatggaggctggcagcttt
acagctcaggtcatcatcttgaaccaccctggtcagatctctcagggttatgcccctgtg
ctggattgccacactgctcacatcgcctgcaagtttgctgagctcaaggagaagatcgac
cgtcgttctggtaagaagcttgaggacaaccccaaggcccttaaatctggagatgctgcc
atcgttgagatggtccctggcaagcccatgtgtgtggagagcttctccacctatcctcct
cttggtcgctttgctgtgcgtgatatgaggcagacggttgctgttggtgttatcaagagt
gttgagaagaaatctgctagtgctggcaaggtcacaaagtctgcgcagaaggctgccaag
accaagtga
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