Triplophysa rosa: 130567087
Help
Entry
130567087 CDS
T09216
Symbol
vars2
Name
(RefSeq) valine--tRNA ligase, mitochondrial isoform X1
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
tros
Triplophysa rosa
Pathway
tros00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
130567087 (vars2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tros01007
]
130567087 (vars2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tros03016
]
130567087 (vars2)
Enzymes [BR:
tros01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
130567087 (vars2)
Amino acid related enzymes [BR:
tros01007
]
Aminoacyl-tRNA synthetase
Class I (U)
130567087 (vars2)
Transfer RNA biogenesis [BR:
tros03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
130567087 (vars2)
Prokaryotic type
130567087 (vars2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
tRNA-synt_1e
Val_tRNA-synt_C
Motif
Other DBs
NCBI-GeneID:
130567087
NCBI-ProteinID:
XP_057210971
LinkDB
All DBs
Position
LG16:16838107..16862252
Genome browser
AA seq
1097 aa
AA seq
DB search
MHLTKRSSGGRIYGRTAYLNWDMWKRVQVVSPRIWSRDLQKTWSAWGYRLCSSAHPPASF
NTPSTQPRTQAEKAKRRREKEKTILSSDVNDVGPDWSEKEKIRYTAALLPGEKKDTSLPF
PQSYSPEYVEFGWYQWWEKQGFFSPEQHGKLPHATDKYFSFCIPPPNVTGTLHLGHALTV
AIEDALARWRRMQGYKVLWVPGCDHAGIATQSVVERKLLREHGKRRQDYSRDEFLGEVWR
WKNEKGDEIDHQLRKLGASLDWTRACFTMDPGFSSAVTEAFVRLCDSGLIYRSEGLVNWS
CALESAISDIEVDSKELSGKTLLSVPGYQQKVEFGTIVTFAYLLEGQEGEVAVSTTRPET
MLGDVAIAVHPNDPRYQDLHGKYCRHPFTDRLLPIIADTMVDMKLGTGAVKVTPAHDHTD
FLLSQRHALPRLTLIGGDGTMTSLCGQWLEGVKRFDARERVISALMERKLFRDKQSHPMS
LPICSRSGDVIEPLLKRQWFVRCQVMAQKAVQAVEDGELQIIPQFYTKMWRNWLSNISDW
CISRQLWWGHQIPAYLVTLQNSVDTEEELWVWGRTAAEARERAAVNFGVNPDHITLTQDP
DVLDTWFSSGLFPFAMLGWPQQKEDLKQFYPNSILETGSDLIFFWVARMVMLGKELTGQL
PFKQVFFHSLVRDKYGRKMSKSLGNVIDPLDVISGVSLERLQKKIKEGNLDPRESVVAME
AQEKDFPKGIPECGTDALRFALCSYKAQGDDISLSVSHVLSCRHFCNKMWQAVRFTLAAL
QDASSPASLAETHPVSSMDRWICSRLYCTVRQCEEAFESYELHTITSALHSFWVHSLCDV
YLESIKPVLKQEASDSEEQKERERQVAISVLYHSVSLSLCLLSPFMPFLTEELWQRLLPY
SADSIKNPTSLCVQPYPKTSQLEHWYFPEEEADFSLAQEVVRVARLLRAQCQMTKEKPDL
WAVCAPDQAQTLLHFRSAICTLGRISKLRLHCPDGGFTDSPPPKGSAVGVVDHSIRLHLC
VQTGINADKQKALLCQRREKLANKLKQAISRTLMPNYTEKVPDRVRQEMDNKIAAMEEDL
KNIEDQLLALEDMKKQD
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atgcacttgactaagcgcagctcgggcggacggatttacggacggaccgcttatttgaac
tgggacatgtggaagcgtgtgcaagtggtgtcaccgagaatctggtccagagatctacag
aagacatggagcgcatggggatacaggctctgttcatcagcccatcctccagcatcattt
aatacaccatcaacacagcccaggactcaagcagagaaagccaaacgtagacgagagaaa
gagaagactatactgagtagtgatgttaatgacgttggaccggactggtcggaaaaagag
aaaataagatatactgctgccctcttacctggagagaagaaagacacttccctgcccttc
ccacagtcctacagcccagaatatgtggaatttggctggtatcagtggtgggagaaacag
ggattcttcagccctgagcagcatggtaaactgcctcatgcgactgataaatatttctcc
ttttgcattcctccaccaaatgtgacgggtactttacatctcggacatgctctgacagtg
gctatagaggacgccttggctcgctggcgtcgaatgcagggctacaaagtgctgtgggtt
ccaggctgtgaccacgctgggattgcaacacagtcagtggttgagaggaagctgttacga
gagcatggaaagcgcagacaggactacagcagagatgagttcctcggagaagtctggaga
tggaaaaacgagaagggggatgaaattgatcatcagctgagaaaactgggtgcgtctctg
gactggaccagagcgtgtttcacaatggacccgggtttcagcagtgctgtgacagaggct
ttcgtcagactgtgtgactctggtctcatctatcgctctgaaggtttggtcaactggagc
tgtgcattagagtcggccatctcagacatagaggtggattcgaaagagctttcaggcaaa
actcttttgtctgttcctggctatcagcagaaggtggaatttgggacgattgtcacattt
gcatatctgttagagggacaggaaggagaggttgccgtgtcaaccacacgaccggagaca
atgctgggagatgtggccattgctgtgcatcctaatgaccctcgatatcaagatcttcat
ggcaaatactgccggcacccgtttacagatcgattgttacccattatcgctgacactatg
gtggatatgaaattggggacaggtgctgttaaagtgacaccagctcacgaccacactgac
ttcctgctatcccagagacacgcgctgccacgcctcactttgattggaggagatggaact
atgacatcactatgtggccagtggctagagggagtcaaacgctttgatgccagagagcga
gtgatcagtgcactgatggagaggaagttattcagagacaagcagagtcaccccatgtca
ttaccaatctgcagccgttctggagatgtgattgaaccgctgctgaagagacaatggttt
gtacgctgtcaagtaatggcacaaaaagcagttcaagcagtagaagatggggagctacag
atcattcctcagttttatacaaaaatgtggaggaactggctgtctaacatcagtgattgg
tgcatttctagacaactttggtggggtcatcagataccagcctatctagtgacgctacaa
aactctgttgacacagaagaggagctgtgggtttggggccgaactgctgcagaggctcgg
gaacgtgctgctgtgaattttggagtgaatccggatcacatcacgctcacacaggaccca
gatgtgctcgatacctggttctcttcgggtctttttccattcgccatgctcggctggccc
cagcagaaagaagacctgaaacaattctaccccaactccattctggaaacaggaagtgac
ctcatctttttctgggtggccaggatggtgatgctgggcaaggagttgactggccagctg
ccctttaaacaggtgttctttcactctttggtgagagataaatatgggcggaagatgagt
aaatctttaggaaatgtcatcgatccactggatgttatttcaggtgtctctctggagaga
cttcaaaagaaaatcaaagaaggaaatttagatccgagagagagcgttgttgccatggaa
gcgcaggagaaagatttccctaaaggtattccagagtgtgggactgacgctttgaggttt
gctctttgctcttacaaagcccaaggagacgacatcagcctgtccgtgtcccacgtgttg
agctgtagacacttctgtaataagatgtggcaggcggtacgcttcaccctcgccgcgttg
caggatgcgagttcacctgcatcattagcggagacacatccggtctccagcatggacagg
tggatatgttcaagactgtactgcacagttcggcagtgtgaagaggcttttgagagctac
gagcttcacaccattacctctgcactgcattccttctgggtgcacagtctctgtgatgtc
tacctagaaagcatcaagcccgtgctaaaacaagaagcctcggacagcgaggagcagaag
gagagagagagacaggtggccatatctgtgttgtatcacagtgtgtctctctctctgtgt
ctcctctcgcccttcatgcctttcctcacagaggagctgtggcagagactcttgccttac
agcgccgactccatcaagaaccccaccagcctgtgcgtgcagccctatccaaagacctca
cagctggagcactggtattttcctgaggaggaagcagatttctctttggcacaggaagtg
gtcagagtggcgaggttactgagggcccagtgccagatgacaaaagaaaaacctgacttg
tgggcagtgtgtgcacctgatcaagctcagacccttctgcacttcagatctgcaatctgc
accctgggtcgaatctcaaagctgcgtctgcactgtccagatggaggtttcacggactca
cctccacccaagggcagtgctgtaggggtggtggatcattccattcgcttgcatctctgt
gttcagactggtataaatgctgacaaacagaaagcactcctctgtcagcgcagagaaaag
ctggccaacaaactcaagcaagccatctctcgcacactcatgcccaactacacagagaaa
gttcctgatcgtgtcaggcaagagatggacaataagattgcagccatggaggaggatctg
aagaacattgaggaccaacttttggctttggaagacatgaagaaacaagactga
DBGET
integrated database retrieval system
