Triplophysa rosa: 130567100
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Entry
130567100 CDS
T09216
Symbol
nup153
Name
(RefSeq) nuclear pore complex protein Nup153 isoform X1
KO
K14296
nuclear pore complex protein Nup153
Organism
tros
Triplophysa rosa
Pathway
tros03013
Nucleocytoplasmic transport
tros03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130567100 (nup153)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
130567100 (nup153)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tros03019
]
130567100 (nup153)
Messenger RNA biogenesis [BR:
tros03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
130567100 (nup153)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
130567100
NCBI-ProteinID:
XP_057210994
LinkDB
All DBs
Position
LG16:8129729..8146669
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AA seq
1493 aa
AA seq
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MAATGGGKIRSRRYHIASKPYAKGKQQQPGLISRVTDTVKSIVPSWLQKYFRNGEVAEGE
TTPVGVEQNNVAPPPNGNEETTPLPDGRDSPEPSTSHMEPSTSRASLNFQDALSRPPINR
THLHFPSLDGSPALGAGTSSLFSQPSTSTAPFSASPFAVSSNFSLVKEIKDSSSQHEDDN
ISTTSGFSSRASDKDVPTSKTVPLLWSPETERTQSGSQPAHSGVKKPAFNLSVFGISSSS
VLNSSVLNSSQLGNSPFYPGKTTYGGAAAIRSARTRPATPYQPPVRRQIKAKPAGAQLCG
VTSATARRILQSLERMSSPLADAKRIPSTVSSPLSASLNHTDLDISNFQAKRKRLEPSVP
PVQKLVVPTVAAVSGNRSMSFRPSLTPGGLNRVIDKTNRETPVRQSPPILESSKAPLPST
SSLSYPLSSTPTTSSAGSGGGKMKRERAIRPSSKRPDDEVAEEPDLPPASLPSNFTLPKF
NFSSPPPTSSLSAITTPLTTVSEERAEKKVPPAPSTPPSVPFTFSSPIVKATTASPPSFS
PSSGFTFSAPTMKTSMSYSNGKITTTVEPVKSAASEEKEFEGPFKPAKVLKQGSVLDILK
GPGFVSSGQSLADRPSQTSSLTQSTPSAPVSGFGDKFRPPAGSWSCGTCLLQKKSSDKKC
VACFAPQPNTDSASKSDSKPAESTGSLRSLFAPPAGSWDCDTCLVRNKPEVVKCVACDTA
KPGTGVKSSLILPPLAKASSVLSSASSASTTTTTSSTGMGLLGFGDKFKKPEGSWDCDVC
MVQNKSHDVKCVACQSAKPGAAVVSSAPASTPAPLLGFGDKFKKPEGSWECEMCCVQNKA
GDQKCVACQSAKPGAKIESKGFSSSFEVQSNSTDSSSSGFKFGTGSADSTSAGLKFGGTF
SDSSSSTGGITFGFGSSNSTSNGGGFKFGGSFSDAASGGIKLCSSSSESTTSTSSSGGFK
FGSVLTTTASTSDEKKTESQDSSTGIKFGGASGSIFGSQAASSENSTLSFGAKPTEKGSS
SSPFTFSVPQSKAEKDDAPASSKTVSTTTTSAAANAIPVFGKQLVAESIPAAPKFGETAT
NESTQVTSTFSFAKPDEKDTSAPSGGLLFGATKEAEISAPSMGFSFSKQEPPKDLPKPSF
AFGNPAETTETSKASFAFGKPAETTEPQKPSFAFGKPVETSEPTKPSFAFGKPVETSEPT
KPSFAFGQSMADTSAPKPTFGFMANSSCTPASSSSTPSLFGTPTTSSQAPAPTSTFIFGQ
SSSSDPTPAKTFMFGQQQDSQPAAPAAPAAAPTPAQPFQFGSSSNSSAPGFAFGGAASST
PASAAPAPAANPSPFGFNSATPSSSFGSGQTPVFGQGAPAFGSAAPSFSATASPAPSFGA
KPSSNPGFGQQTNPTPTFGSTAASAGQGGFQFGSSGGFGSPGSSSGVFAFGAWSAAPSTP
AASPAMPTVNAPSSGGFSFGQTPPAFNIGLSGQNSAQNSIAGRKIKMAVRRRK
NT seq
4482 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgacaggaggagggaaaatcagatcaagaagatatcatatcgcttcaaaacca
tatgccaaaggcaaacagcagcagcctggtctcatcagtcgagtgacggatacagtgaag
agcatagtcccctcctggctgcagaaatacttcagaaatggtgaagtcgctgagggtgaa
accactccagttggtgtggaacagaacaacgtggctcctcccccaaatggcaatgaagag
accaccccgctcccagatggacgagactctccagagccaagcacaagtcacatggaacca
tctacaagcagagcatcactgaatttccaggatgctctttcaagacccccgataaatcga
acccacctgcactttccctctctggatggctctcctgcattaggggctggcaccagctcc
ctcttctcccagccctccacatctacagcacccttctcggccagccctttcgctgtcagc
tccaacttctcccttgtgaaagagattaaggattcaagctctcaacatgaggatgacaac
atctcgaccaccagtggtttttcgtcacgtgcatctgacaaagatgtgcctacgtcaaag
actgtgccgctcctttggtctccggagactgagcgcactcagtctggatcgcagccagcg
cactctggagtcaagaaaccagccttcaacctgtccgtctttggcatttcctcatcatcc
gtgttgaacagttcagtactgaactccagtcagttggggaactcacccttttacccggga
aaaaccacatatggaggagctgctgcgattagatcagctcgtacacgccctgctactcct
taccagcctccggtcaggagacagataaaggcaaagccagctggggctcaactgtgtgga
gtgaccagtgcaacagccagacgcatcctgcagtctttggagcgcatgtccagccctctt
gccgatgcgaaaagaattccatctacagtttcatcacctttatcagcatcattgaatcac
acagaccttgacatttcaaatttccaagcaaagagaaaaaggctggaaccttcagtccca
cctgttcaaaagctggttgttccgacagttgctgcagtgtctggtaaccgctcgatgtca
tttagaccatcactcacccctggtggactgaaccgagtcattgacaaaaccaacagagaa
actcctgttagacaatcccctccaattttagagtcctctaaggctcctcttcccagcaca
agcagtttgtcgtaccccttgtccagcaccccaacaactagcagcgctggttcaggaggg
ggcaaaatgaagagagaaagggccataagaccttcctcaaaacgacctgatgatgaggtc
gccgaggagccggacttgccacctgcctctctccctagcaatttcactttgcccaaattt
aatttctcttctcctccccctacctcctcactgagcgccatcacaaccccacttacaacc
gtctctgaagaacgtgccgaaaagaaggtgccacctgcaccatccacaccaccatctgtc
cccttcacattttcttcacctatcgtcaaggcaaccactgccagccctccatctttctct
ccatcgtctggattcaccttcagcgcacctactatgaaaacaagcatgtcttactccaat
gggaaaatcaccacaacagtggaaccagtaaaatcagctgccagtgaagaaaaagagttt
gaaggaccattcaagccagcaaaagtcttaaaacagggcagtgtattggatatacttaag
ggacctggatttgtgtcctctggtcagagcttagctgacagaccctcacagacttcatca
ttgacccagagtacaccctcagctcctgtttctggttttggtgacaaatttaggccgcct
gctgggtcatggagctgtggcacttgcctcttgcaaaaaaagtcctcagacaaaaaatgc
gtggcttgtttcgcaccacaacccaacacagactctgcctctaaatcggacagtaaacct
gcagagagcactggaagcctccgttccctctttgcccctccggccggtagctgggattgc
gacacgtgtttggtcaggaacaaaccagaagttgttaaatgcgtagcttgtgacacggcc
aaacctgggactggagtaaaatccagcctgattttaccgcctctggccaaggcctcatct
gtcctctcttctgcttcctctgcctctacaaccaccaccacttcttctacagggatggga
ctgttaggatttggggacaaatttaagaagccagagggatcttgggactgtgatgtgtgc
atggttcaaaacaaatcacatgatgtaaaatgtgtagcatgtcagagcgctaaaccagga
gctgctgtagtctcgtctgcaccggcaagcactcctgcacctttgttaggatttggcgat
aagttcaagaaacctgaggggagctgggagtgtgagatgtgctgtgttcagaataaggca
ggggaccagaaatgtgtggcctgccagtcagcaaaaccaggagctaaaatagagtccaaa
ggttttagttcatcttttgaagttcagtccaacagtacagactctagctcatccggtttc
aagtttggcaccggctctgcagactcgacatctgctggactgaagtttgggggcactttc
tcagattcttcctcctccacgggcggaataacatttgggtttggctcttccaactccacc
tcaaatggagggggcttcaaatttggaggctctttctcagacgccgcttcaggtggaatc
aaactctgtagctcctcatcagaatccacgacaagcacaagctcatcaggcggctttaag
ttcggtagtgttttgacgacaactgcatctacgagtgatgagaaaaagactgaatctcag
gattcgagtacaggaattaaatttggtggtgctagtggaagcatttttggctctcaagct
gctagttctgaaaactctaccttgtcatttggagctaaacctacagagaagggaagttcc
agttcaccgtttacgttctcagtgccccagtccaaggctgagaaagatgatgctcctgct
tcctcaaaaactgtttcaactaccacaacatcagcagcagcaaacgccatccctgtgttt
ggcaaacaactggtagctgaatctataccagctgcccctaaattcggggagactgcaaca
aatgaatcaacacaggtgacttctaccttcagttttgcaaaaccagacgagaaggatact
tctgcgccctctggtggattgttattcggtgctaccaaggaagcagagatttctgcacct
tccatgggcttctctttcagcaagcaggaacctccgaaagatctccccaagccttcgttt
gcgtttggtaatcctgccgaaacaacagaaacctcgaaggcatcatttgcatttggtaaa
cctgcagaaacaacggaaccccaaaagccgtcattcgcttttggaaaacctgtcgaaaca
tcagaacccacaaagccgtcattcgcttttggaaaacctgtcgaaacatcagaacccaca
aagccatcattcgctttcgggcagagtatggcagacacatctgctccaaagccaacattt
ggcttcatggccaactcctcatgcacccctgcttcctccagctccacccccagccttttt
ggcactcccactacctcctcccaggcccctgctccaaccagtacctttatatttggccag
agctcctcttctgatcccaccccggcaaagacgtttatgtttggacagcagcaggacagc
caaccagcagctcctgcagcacctgctgccgcacccaccccggcacaacctttccagttc
ggctcgagctcaaactcatctgctcctggtttcgcttttggtggtgcagcgtcctccacg
ccggcctctgctgctcctgctcccgctgccaacccctccccgtttggttttaactctgcc
accccttcctctagctttggctccggacagacacccgtctttggacagggcgctcctgct
tttgggtcagcagccccttcattttcagccacagcctccccagccccttccttcggagca
aagccaagttctaacccagggtttggccagcaaaccaaccccacacctacgtttggatct
actgctgcctctgcaggccaaggaggtttccagtttggaagctctggtggatttggatca
ccagggagcagcagtggtgtgtttgcttttggggcatggtcagcagctccatcgactcct
gcggccagtccagccatgcctactgtaaatgctccatccagtggaggcttcagctttggc
cagacccctcctgcatttaacattggattatctgggcagaattctgcacagaattcaatt
gctggacgcaaaatcaaaatggctgttcgacgcaggaagtag
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