Triplophysa rosa: 130567234
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Entry
130567234 CDS
T09216
Symbol
sdc3
Name
(RefSeq) syndecan-3
KO
K16337
syndecan 3
Organism
tros
Triplophysa rosa
Pathway
tros04514
Cell adhesion molecules
tros04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
130567234 (sdc3)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
130567234 (sdc3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
tros00535
]
130567234 (sdc3)
Proteoglycans [BR:
tros00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
130567234 (sdc3)
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Gene cluster
GFIT
Motif
Pfam:
Syndecan
TGF_beta_GS
Motif
Other DBs
NCBI-GeneID:
130567234
NCBI-ProteinID:
XP_057211183
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Position
LG16:complement(9168841..9192913)
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AA seq
407 aa
AA seq
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MKLPCWITLALLLAQTALAQRSKSRPVDEDSSGDVPYDDEDSFSGSGSGFPDIDVSPTGA
GVSVTTEEPLPLSTTQATGPAPSASPAAEPSRPPPPEVERESGMGQEDRDTKLEIEKKWE
EEMQRPKEQDGESERERKWEVQEGEWEEEKSKATVVPRLTEVPMVAVDSTTILDESTVAP
SDLEDPSTTEKDDLFNTTEITILEPSSTTQMTDDITTTEVLPTTVASTTAKPTRPRPVPT
TPSTAPPRPRQPQTTPSRAAPTESSTHSVMSSTVQTQTPYETVNNEVAGAGPSGDFEIRE
DEVRQGNEVGRGKAAPGVPAEPDLTGNTVDAAGSSAAQLPQKNILERKEVLIAVIVGGVV
GALFAAFLVMLLVYRMKKKDEGSYTLEEPKQATVTYQKPDKQEEFYA
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcccgtgctggattacactggcgctgctgctggcgcagaccgcactggctcag
cggagcaaatcacggccggtggacgaggatagttctggagatgtgccgtatgatgacgaa
gactccttctctggttctggatctggctttccagatatagacgttagtccgaccggagca
ggtgtgtctgtcactacagaggagcccctcccactttccacaacacaggccactggcccc
gccccctctgcctccccagctgcggagcccagtaggccaccaccacctgaggtagaacga
gaaagcggaatgggacaagaagacagggacaccaaattagagattgagaaaaagtgggag
gaagaaatgcagaggccaaaggagcaggacggagaatctgagagggaaagaaaatgggaa
gtgcaggaaggagaatgggaagaagagaagtcaaaggctacagtcgtacctcggcttact
gaagttcccatggtggctgtggactcgaccacaattctggatgagagtacagtggctcct
agtgacttggaggaccccagcaccacagaaaaagatgatttgttcaacactacagaaatt
accatattggagccatccagcactacgcaaatgacagatgacatcacgaccaccgaggtg
ctacccaccactgttgcatcaaccacggctaagcccaccagaccgcgtcccgtcccgacc
actcccagcaccgctcccccacgaccccggcaaccacagaccacccccagtagagccgcc
ccgaccgagagcagtacacattcagtgatgagctcgacagtacagacacaaacaccatat
gagactgtaaataatgaagtcgcaggagcaggtccaagtggtgattttgaaatccgagag
gatgaagttcgccaaggcaacgaggtcggacgaggcaaagcggccccgggcgtaccagca
gagcccgatttgactggcaacacagtagatgcagctggaagttcagctgctcagcttcca
cagaaaaacattcttgagcggaaagaagttttgatagcggtgattgttggaggtgtagtg
ggagcactcttcgccgccttcctcgtcatgctactcgtctatcgaatgaaaaagaaagac
gaaggcagctacacactggaggagcccaaacaagccaccgtcacctaccagaagcccgac
aagcaggaagaattctatgcctaa
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