Triplophysa rosa: 130567286
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Entry
130567286 CDS
T09216
Symbol
sox4a
Name
(RefSeq) transcription factor SOX-4a
KO
K23581
transcription factor SOX4 (SOX group C)
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tros03000
]
130567286 (sox4a)
Transcription factors [BR:
tros03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
130567286 (sox4a)
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Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
130567286
NCBI-ProteinID:
XP_057211265
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Position
LG16:16179187..16182435
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AA seq
357 aa
AA seq
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MDTYVAMVEQTHSTDVLSGDSIDSGEMDLDMDASPTPGSPNSTGDKMDIAWCKTPSGHIK
RPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDSDKIPFIREAERLRLKHM
ADYPDYKYRPRKKVKSSSGKSGEKGERVSGSPGAKAAPKKSSKTLSRTHRKSAALELPSH
PVPADHHALYKSRSASAAKQIPDKPAKRAHVFGGCSTDSSPPSVAVPASPTLSSSAESSD
PLSLYDDGLASGKEDTESAARYKYTRASSPTPSASHSSSSHSSSSDEEFDDELADLSPGF
DSFSTFGTAPLDRDLEFNFESGSGSHFEFPDYCTPEVSEMISGDWLESTISNLVFTY
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atggacacgtacgtggctatggtggagcaaacgcacagcaccgacgtgctctccggcgac
tccattgattcgggggagatggacctagacatggacgcctcgccgacccccggctcccca
aactcaactggggataaaatggacatcgcgtggtgcaagaccccatccggacatatcaag
aggccaatgaacgcattcatggtttggtcgcagatagaaaggcgcaagatcatggaacag
tcgccggacatgcacaacgcggagatctccaagagacttggcaaacgctggaaactttta
aaagacagcgataagatccccttcatacgcgaggctgagcgactgcggctcaagcacatg
gcagactatcctgactacaaatatcgacctcggaagaaggtgaagtcatccagcggcaaa
agcggagagaagggggagcgcgtcagcggcagcccgggcgcgaaggctgcacccaaaaag
agctcgaaaactctcagcaggacgcacagaaagtccgctgcgcttgaactgccttctcac
ccagtccctgcagaccaccacgctctctacaaatccaggtctgcgtccgccgccaagcaa
atacccgacaaaccagcaaaacgcgcgcatgtgttcggaggatgcagcactgacagcagc
ccgccctccgtcgccgtgcccgccagtcccactctgagcagctcggcggaatccagtgac
ccgctgagcctgtacgacgacgggctcgccagcggaaaagaagacaccgagtccgcggcg
cgctacaaatacacgcgcgcatcgtctccaacgccctccgcgtcgcactcatcctcctca
cattcatcttcatctgacgaggagttcgacgacgagcttgcggacctcagtcccggcttt
gacagcttcagcacctttggcactgcgcccctggacagagacttggagttcaattttgag
tctggctccggctcgcactttgagttccccgattactgcacaccagaggtgagcgaaatg
atatcaggggactggctcgaatcgacaatatccaacttggtattcacttattga
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