Triplophysa rosa: 130567337
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Entry
130567337 CDS
T09216
Symbol
pex1
Name
(RefSeq) peroxisome biogenesis factor 1 isoform X1
KO
K13338
peroxin-1
Organism
tros
Triplophysa rosa
Pathway
tros04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
130567337 (pex1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tros04131
]
130567337 (pex1)
Membrane trafficking [BR:
tros04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
130567337 (pex1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
PEX-2N
PEX-1N
AAA_lid_3
AAA_16
AAA_22
AAA_14
RNA_helicase
nSTAND3
DUF815
TIP49
ABC_tran
AAA_5
AAA_28
NACHT
RuvB_N
ATP-synt_ab
AAA_2
IstB_IS21
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
130567337
NCBI-ProteinID:
XP_057211336
LinkDB
All DBs
Position
LG16:complement(13486040..13495896)
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AA seq
1254 aa
AA seq
DB search
MLGGQGIQPVTVVFNNSKNCFLHLSSNFAIHLCLRENQIVELSWGVSAPVFLSWIRTRQS
SGQDDRVEISRQLGEKLGLKDGEQGFLRPCHQVHSVQQVFVEPLSADDWEILELHSIVLE
ERLLDQIRVVYSGGAFPVWVDQHTVIYIKIVSLSPSVSYGHLEQFTELVVSPKLHPRGEQ
LQTHPIETNRHLQKQQNDDHTHTSISSSIASSVHQETPGDHLELNQSQKEGQWGGIADLK
SLIAYLFASRREPAKEDLTIPMIPVLLKDCVLRTCGTPPRFINHLGQCYDVHVLPWNLQE
ENWSPGQCALTYGRLSKIYSPKEVRERVKQAMEKKKIMEGPQKEKDPEDGKENSVVVRML
CHNIEKLQEDQKFNRSEEIYSGKVWIPEALQRRLRITPHSAVRIQPLKSTHRVAETVTLQ
PLQALAESEREDEVQTAFLDWLHAQSHEPLSCLTARSNIILLPCAEGKSEFVLSVLKPEQ
QQDDEMFFLSTTLLKKTDIQIVKGPHHLDNRGSSDSDIEDPCLGFPSFSSLGGVEDISRA
AFEHISHALMGGPLSRELVSMGRGLRGGALLITGAKGRGKSSLSRALCQKANKELDAHVR
TVDCKMLKGKRADTIRQRLEEVFEQAVWRQPSVVLLDDLDHITGAASSPEHEHGPEAVLR
QHIAQSLRHLVGEMVVRSSLIALVVTAQSEHSLHPTLTKVQGSHFFQSFSKIPTPDQAQR
GEILRSLIHKKNFQDYQATLDLDSVAKETEGYMPHDLNLLLERAIHAYTVRSRSNGDSKD
LSYKDFKQALQDFTPPSLWGAQLQVPSRAGMESIGGLHQARQLLMDIVLLPAKYPLLFSS
LPMRQCSGVLLYGAPGTGKTLLAGAVAKESSMNFISIKGPELLSKYIGASEQAVRDVFQR
AQAAKPCILFFDEFDSLAPRRGHDNTGVTDRVVNQLLTQLDGVEGLTGVYVLAATSRPDL
IDPALLRPGRLDKSLYCPPPDREARLEILKALTRSVPLAADVDLEQIAVATELFTGADLK
ALLYNAQLEAIHSSLGPNLLLDLGSGSDSDVSLSSLIFLNHSSGSDDSAGEGDAGLDQSM
VLLDPGEFPPEDPRHNIWRLYFDSSFESELDNHSLSELNSRCPSGHNSIAPDVTGASVRD
ASSCHAPVLMSCVQDGFQELTNEQSEHLRAEVNAVKNSYRRNMDDSSLVQTGPSKPGCLI
GQAHLTSALSNTRASVSREDWRGYSELYESFGALKEGRSQSTASFKAGHRVTLA
NT seq
3765 nt
NT seq
+upstream
nt +downstream
nt
atgttggggggtcagggaatacagcctgtcacggtggtcttcaacaactccaaaaactgc
tttcttcacctgtcatcaaacttcgccattcatctctgtcttcgtgagaaccagatcgtg
gagttgtcgtggggtgtttctgcacccgtgttcctcagctggatcaggaccagacagtct
tcaggtcaggatgacagagttgagatcagcagacagctgggagaaaagcttggactcaag
gatggagagcagggcttcttgcggccgtgtcatcaggtgcattcagtgcagcaggtgttt
gtcgagcctctctctgcagatgactgggagattctggagctccacagcatagttttggaa
gagcgactcctggatcagattcgagtggtctacagtggtggtgctttccctgtgtgggtg
gatcaacacactgtcatctatattaaaatagtgtccctatctccatctgtctcatatggc
cacctggagcagttcactgagcttgttgtttctccaaaactacatccaagaggtgaacaa
ctccaaactcaccccatagagacaaaccgtcatctacaaaaacagcagaatgatgaccac
acacatacttccatctcatcctccatagcctccagtgtccatcaggaaacccccggagat
catctggagttgaaccaaagtcagaaggagggtcagtggggaggtatcgctgacctgaag
agccttattgcatatctgtttgcaagtcgacgtgagcctgcaaaggaggatcttaccatt
cccatgattcccgttttactgaaagactgtgtcctcagaacatgtggaaccccgcctaga
tttattaaccaccttgggcaatgttatgatgtacatgtactgccatggaatctgcaggaa
gaaaactggagtccagggcagtgtgccttaacatacgggagactttcgaagatttattct
cccaaagaggtcagggagagagtcaagcaggccatggagaagaagaaaatcatggaagga
cctcagaaagagaaagatccagaggacggtaaggagaacagtgttgtggtcaggatgctg
tgtcacaacatagaaaagctgcaggaggatcaaaagttcaacagaagtgaagaaatttac
tctgggaaagtatggatcccggaagcgctgcagaggcgattgagaataacccctcactct
gctgtcagaatacagcctctaaaatcaacacatagggtagcagagacagtcacgctacaa
ccattacaagcactggcagaaagtgaaagagaggatgaagtacagactgcattcctagac
tggctgcatgctcagagtcatgagcctctgtcctgtctgacagcacgctctaacatcatc
ctcctaccctgtgctgaaggaaagtcagaatttgtgttgagcgtgttaaaaccagagcaa
cagcaagatgatgagatgttctttctatcaactactttactcaagaaaacagatatacag
attgtaaaggggccacatcatttggacaacaggggttcttcagactctgatattgaagat
ccatgtctcggatttccctccttcagctctcttggtggggtagaggatatcagcagagcg
gcctttgagcacatctctcatgctttaatgggaggtcctctgtcccgtgagctggtttca
atgggacgaggacttaggggcggagctttgctcatcacaggtgccaagggcagagggaag
tcttctctgtctagagcactgtgccaaaaagcaaataaagagctggatgcccatgtgcga
acggtggactgtaagatgctgaaaggcaagagagcagacacaatcagacagaggctggag
gaggtttttgagcaggcggtttggaggcagccctctgtggtcctgctggatgatttggat
cacatcacgggtgctgcatcttcaccggagcatgagcacgggccggaggctgtactgcgg
cagcacatcgcacagagtttgaggcatttggtcggtgagatggttgtacgttccagtctc
attgctttagtggtcacagcacaaagtgagcattcccttcatccgaccctgactaaagtg
cagggctcacacttcttccagagcttcagcaagatcccaacaccagatcaggctcaaagg
ggcgagatcttgaggtcactaatacacaagaagaactttcaggactatcaagctactctt
gatttggacagtgttgccaaggaaacggaaggatacatgccacatgatttgaacctgctg
cttgagcgggccatccatgcctacactgtacgcagcaggagcaatggcgactcgaaagat
ttgagttacaaggacttcaaacaggcccttcaagactttacaccaccctcgctctgggga
gctcagctgcaggtgcccagcagggcgggcatggagagtatcgggggacttcaccaagca
cgtcagctcctgatggacatcgtactactgccggctaagtacccactgctcttctccagt
ctgcccatgcgccagtgctccggtgtgctgctctatggagctcctggcacaggaaagact
ctgctagctggggctgtggccaaggaaagcagcatgaacttcatcagcatcaagggtcct
gaacttctcagcaagtacattggagctagtgagcaggcggttagggatgtgtttcagagg
gctcaagcagctaagccctgcatactgttcttcgatgagtttgattctctggcccctcgg
agaggtcacgacaacacgggagtcactgaccgagtggtcaatcagctcctcacacagctg
gatggagtcgaggggctgacaggggtgtatgtgttggcggccaccagtcgtccggatctt
atcgaccctgctcttctgagacccggacggctggataagtctctctactgccctcctccg
gatcgggaagcacggttggagatcctgaaggctttgactcgctctgtgccattggctgca
gatgtggatttggaacagattgctgtggcaacggagctgttcactggagctgacctgaaa
gctcttctatataacgctcagctggaggcaattcacagcagcctggggcccaaccttctt
cttgatctgggctcagggtcagacagtgatgtcagcctctcctccctgatcttcctgaat
cacagcagtgggtcagatgactccgccggggagggggatgcagggctcgaccagtctatg
gttctgctggatcccggcgagttcccacctgaggacccacgtcacaacatctggcgcctt
tactttgatagctcctttgagtctgaactggacaaccattctctctctgaactgaattcc
cgatgcccgtctgggcacaattctatcgctcctgatgtgacaggggcatctgtgagggat
gcaagctcttgtcatgccccagtcttaatgtcctgtgtgcaggacggctttcaagaactg
accaatgagcagtcagagcatctcagagcagaggtcaatgctgtaaagaatagttaccgc
agaaacatggatgactcatctctggtacagactggacccagtaaacctggctgtctcata
ggccaggctcacctgacctcagctctgtctaacactagagcatctgtcagcagagaagac
tggaggggatactctgaactatatgagtcttttggagctttgaaggaaggcagatctcag
agcactgcttcatttaaagcaggtcatagggtaacgttagcttaa
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