Triplophysa rosa: 130567420
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Entry
130567420 CDS
T09216
Name
(RefSeq) thyroid hormone receptor beta isoform X1
KO
K08362
thyroid hormone receptor beta
Organism
tros
Triplophysa rosa
Pathway
tros04080
Neuroactive ligand-receptor interaction
tros04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
130567420
04081 Hormone signaling
130567420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tros03000
]
130567420
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
tros03310
]
130567420
Transcription factors [BR:
tros03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
130567420
Nuclear receptors [BR:
tros03310
]
1. Thyroid hormone like
1A. Thyroid hormone receptor (THR)
130567420
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
CpXC
Motif
Other DBs
NCBI-GeneID:
130567420
NCBI-ProteinID:
XP_057211484
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Position
LG16:complement(22738810..22857170)
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AA seq
416 aa
AA seq
DB search
MSEQADKCNPRWKDEPIQNGYIPSYLDKDELCVVCGDKATGYHYRCITCEGCKGFFRRTI
QKNLNPTYACKYESKCIIDKVTRNQCQECRFKKCLAVGMATDLVLDDSKRLAKRKLIEEN
RERRRRREELQKTAWDRPEPSQEEWELIRVVTEAHVATNAQGNHWKQKRKFLVEEAMLLN
EITCNLFCTSDQSAVGVKESKPEDIGSAPIINAPEGSKVDIEAFSQFTKIITPAITRVVD
FAKKLPMFCELPCEDQIILLKGCCMEIMSLRAAVRYDPESETLTLNGEMAVTRGQLKNGG
LGVVSDAIFDLGVSLSSFNLNDTEVALLQAVILLSSDRPGLTSVERIERCQEDFLLAFEH
YINHRKHTVAHFWPKLLMKVTDLRMIGACHASRFLHMKVECPTELFPPLFLEVFED
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagcaagcagacaaatgcaacccccgctggaaagatgagcccattcagaatggg
tacataccaagttacctggacaaggatgagctgtgtgttgtgtgtggagacaaagcaacc
ggttatcattaccgctgcatcacctgtgagggctgtaaaggttttttccggcgtacaatc
caaaagaacttaaacccgacatacgcgtgcaagtacgaaagcaagtgcatcatcgataag
gtcacacgtaaccagtgccaggaatgtcgcttcaagaaatgcctcgctgtcggcatggca
acagacttggtattggatgacagtaagcgtctggccaaacggaagctgatcgaggagaat
cgtgagcggcggcggcggcgcgaggaactccagaagacagcgtgggaccgaccggagccc
tcgcaggaggaatgggagctgatccgcgtggtcaccgaagcccacgtggccacgaacgcc
cagggcaaccactggaaacagaaacgcaaattcctggtcgaggaagcaatgctacttaat
gaaataacatgtaatttattctgtacttctgaccagagtgcagtgggggtgaaggagtcc
aagcccgaggacatcggttcggcgcccatcatcaatgcgcccgaggggagcaaagtggac
atcgaagccttcagtcagtttacaaaaattatcacccccgccatcacgcgtgtggtggac
tttgccaaaaagctgcccatgttctgtgagctgccttgtgaggatcagatcatcttgctg
aagggctgctgtatggagatcatgtctcttcgagcagccgtacgctatgatcccgagagc
gagactctgacgctgaacggagagatggccgtcacgcggggtcagctgaagaacggcggt
ctgggcgtggtgtcggacgccatctttgatctgggagtctcgctgtcgtcctttaacctg
aatgatacagaggtggcgttgctgcaggccgtcattctgctgtcctccgatcgtccaggt
ttaacaagcgtggagcgcatcgaacgctgtcaggaggatttccttttggcctttgaacat
tacatcaaccaccgcaagcacacggtggcacacttctggcccaagctgctgatgaaggtg
acggatctgcgcatgatcggagcctgtcacgccagccgctttctgcacatgaaggtggaa
tgtcccacagagctctttccgcctctcttcctggaagtgttcgaggactga
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