KEGG   Triplophysa rosa: 130567429
Entry
130567429         CDS       T09216                                 
Symbol
rbbp4
Name
(RefSeq) histone-binding protein RBBP4 isoform X1
  KO
K10752  histone-binding protein RBBP4
Organism
tros  Triplophysa rosa
Pathway
tros03082  ATP-dependent chromatin remodeling
tros03083  Polycomb repressive complex
tros04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:tros00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    130567429 (rbbp4)
   03083 Polycomb repressive complex
    130567429 (rbbp4)
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    130567429 (rbbp4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:tros03036]
    130567429 (rbbp4)
Chromosome and associated proteins [BR:tros03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     130567429 (rbbp4)
  Histone modification proteins
   HAT complexes
    HATB complex
     130567429 (rbbp4)
   HDAC complexes
    Sin3A-HDAC complex
     130567429 (rbbp4)
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     130567429 (rbbp4)
    PRC2.2
     130567429 (rbbp4)
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     130567429 (rbbp4)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    130567429 (rbbp4)
  Chromatin remodeling factors
   NuRD complex
    130567429 (rbbp4)
   NuRF complex
    130567429 (rbbp4)
   NuRF complex (fruit fly)
    130567429 (rbbp4)
SSDB
Motif
Pfam: WD40 CAF1C_H4-bd WD40_CDC20-Fz WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_RIG_2nd Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR75_1st Beta-prop_EML EIF3I WD40_MABP1-WDR62_2nd WD_LRWD1 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st WD40_RFWD3 Beta-prop_DCAF12 ANAPC4_WD40 Beta-prop_RIG_1st WD40_MABP1-WDR62_1st eIF2A Beta-prop_IFT140_1st MIOS_WD40 Beta-prop_SPT8 NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 130567429
NCBI-ProteinID: XP_057211498
LinkDB
Position
LG16:14932431..14935836
AA seq 424 aa
MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKE
FSVHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK
INHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECTPDLRLRGHQKEG
YGLSWNPNLSGCLLSASDDHTICLWDISTVPKEGKIVDAKTIFTGHTAVVEDVSWHLLHE
SLFGSVADDQKLMIWDTRSNNTSKPSHAVDAHTAEVNCLSFNPYSEFILATGSADKTVAL
WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAE
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGAADT
EVQG
NT seq 1275 nt   +upstreamnt  +downstreamnt
atggctgataaagaagctgcatttgatgacgcggtggaggagagggtgataaatgaagaa
tataaaatatggaagaaaaacactccgtttctgtacgatctggtgatgacccatgccctg
gagtggcccagtctaactgcccagtggttgccagatgtcaccagacccgaaggcaaggag
tttagcgtgcaccgtcttgttcttggcacacatacctccgatgaacagaaccacctggtt
attgccagcgttcagctgcccaacgatgatgcccagtttgatgcctcgcattatgacagt
gaaaaaggtgaatttggtggttttggctcagtgagtggcaagatagagatcgagattaag
attaatcatgagggagaggtgaacagggctcgctacatgccacagaatccctgcatcatt
gccaccaagacccccactagtgatgtgctggtctttgactacaccaagcacccctccaaa
cctgacccctctggagaatgcactcctgacctgcgtctgagggggcatcaaaaagaaggt
tatggtctgtcctggaaccccaacctgagtggctgtctgctgagtgcatctgatgatcat
acaatctgtctatgggacatcagcacggtaccaaaagagggaaagatagtggacgctaag
acgattttcactggtcacactgctgtagtagaggacgtttcttggcatctgcttcacgag
tcactgtttggctcagtggctgatgatcagaagctcatgatctgggacacacggtccaat
aacacatccaaacccagtcacgcagtggatgcacacactgcagaggtcaactgcttgtcc
ttcaacccttacagcgagttcatcctggccactggttctgctgacaaaactgttgcattg
tgggacctgcgaaacctcaagctgaaacttcactcttttgagtcgcacaaagatgaaatc
ttccaggttcagtggtcaccccataatgagaccatcctggcctctagcggaacagacaga
cggctcaatgtctgggacctcagtaaaattggtgaggaacagtcaccagaagacgcagag
gatggtcctccggagctattgtttatccatgggggccatacagctaagatttcagacttc
tcttggaatccaaatgaaccatgggtgatttgctcggtgtcggaagacaatatcatgcaa
gtctggcaaatggctgagaacatttacaatgatgaagatccagagggggcagcagacact
gaagtccagggataa

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