Triplophysa rosa: 130567457
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Entry
130567457 CDS
T09216
Symbol
zc3h12ab
Name
(RefSeq) ribonuclease ZC3H12A
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tros03019
]
130567457 (zc3h12ab)
Messenger RNA biogenesis [BR:
tros03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
130567457 (zc3h12ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
zf-CCCH_2
zf-CCCH
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
130567457
NCBI-ProteinID:
XP_057211541
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All DBs
Position
LG16:complement(2070863..2078473)
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AA seq
619 aa
AA seq
DB search
MSTKISTIPTLRTFLDSRWSDSNDATAWLTAPAAVCDPPVTCKDRMDPGQPNPTPDEFQT
QLDLFLKLGFSQTQVRAAFLKLGLGADTNKVLGELIQAGGEPEEPTASPVLVPRGDGTKV
RSAQTDCRSSPEELVEDEDALRPIVIDGSNVAMSHGNKEVFSCLGIQLAVNFFLVRGHLD
ITVFVPSWRKEQPRPDVPITDQHILRELEKRKLLVFTPSRRVAGKRVVCYDDRFIVRLAY
DSDGIIVSNDTYRDLQGERPDWKRFIEERLLMYSFVNDKFMPPDDPLGRHGPTLDNFLRK
TPRLPKKQPCPYGKKCTYGIKCKFHHPERSKQSQRALADELRDKAKISSTPHKPQSIPLG
PSQSPSLEEVLEHKLSLDPCGPLKKTHTSENVLVVKGVPQPTQKKFSSKREHRHSPTDPS
SFPYGSQERLDSGLGSYESHLPEALYYETEHRKSKPSSGGRHPCGPANRQPCSCCSYESQ
SVSGGSMSLTSSPNPEHMSYGQPRYHSYGGGPVYPPVNMSQYSYHHSRGPPPHHGYWSDH
YGAYPPASQSPLQDERGHGRWSPSKPNPQWSEREQVRKKLLAIFNARLVDRAMDRFPQIL
DPQRLAAEILTLQSQDGAL
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgaaaataagcaccatcccaacgttgcgcacgtttttggattcccgttggtct
gactcaaacgacgccaccgcatggctaacagcccccgcggccgtatgtgaccctcccgtt
acctgcaaagatagaatggacccgggtcagcccaacccaaccccagacgagttccagacc
cagctcgacctgttcctcaaactggggttttcccaaactcaggtgcgcgctgctttcctg
aaactcggcctcggtgcggacacaaacaaagttctgggggagctgatacaggctggtgga
gaacctgaggaacccaccgcctcccctgtgctggttccacgcggggatggtacgaaggtc
cgaagcgcccagacagactgtcgtagctccccagaagagcttgtagaagatgaagatgca
ctcagaccgattgttatagatggaagtaatgtagccatgagccatgggaacaaggaagtt
ttctcctgtctgggaatccagctggctgtgaatttcttcctggtgcgaggtcaccttgac
atcaccgtgtttgtgccatcctggagaaaagagcagccgcggcctgacgttcccatcaca
gatcaacacattttacgggagctggagaagagaaagcttcttgtattcacgccatccaga
agggtggctggaaaacgtgtggtttgctatgacgaccgtttcatagtgaggctggcgtac
gactccgacggcatcattgtgtccaacgacacgtatcgagatctccagggagaacgtcca
gattggaagcgtttcattgaggagagacttctgatgtactcgttcgtcaatgataaattt
atgcccccggatgaccctctgggaagacatggtcccaccctagacaacttcttgaggaag
actccacgtctacctaagaaacagccgtgtccttacggaaagaagtgcacgtacggaatc
aaatgcaaattccatcaccctgagcgaagcaaacaatcccagcgtgccctggccgacgag
ctgcgggacaaggctaaaatctcttccacacctcacaaaccacagtcgattcctctcggg
cccagtcaaagtccatctctagaagaagttttggaacacaaactatctcttgacccgtgc
ggaccgctcaaaaaaacacacaccagcgaaaacgtgctggtcgtcaaaggagtccctcag
ccgactcagaagaagttttcctcaaagagagaacaccgtcattccccgacagatccgagt
tcttttccttacggatcgcaggagcgtttggattctggcttggggtcctacgaaagtcat
ttaccggaagcgctctactacgaaacggagcacagaaagtccaaaccgtccagcggtggg
cggcacccttgcggtccagctaacagacaaccctgcagttgctgctcgtatgaatctcag
agcgtcagcggaggcagcatgagcttaaccagctcgccaaacccagaacacatgagttac
ggtcaaccccgttatcattcgtacggagggggtccggtttacccgcccgtcaacatgtca
cagtattcgtatcatcacagcagaggtcctccacctcatcatggatactggtctgatcat
tatggtgcctatcctccagcatcccagagtcccttgcaggatgagagaggacatgggcgc
tggtccccttccaaaccaaatccacagtggtccgagagggagcaggtgagaaagaaattg
ctggcgatttttaatgcacggttggtggacagggctatggacaggtttcctcagatcctc
gatccgcaaagactggctgcagagattttgaccctacaatctcaagatggggctttataa
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