Triplophysa rosa: 130567543
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Entry
130567543 CDS
T09216
Symbol
prdm1b
Name
(RefSeq) PR domain zinc finger protein 1 isoform X1
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tros03000
]
130567543 (prdm1b)
Transcription factors [BR:
tros03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
130567543 (prdm1b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SET
zf-C2H2_4
zf-C2H2_6
C2CH-3rd_BIRD-IDD
zf-C2H2_jaz
zf-C2H2_11
Zf-C2H2_ZNF451_C
STL11_N
zf-met
zf-C2HE
zf-MYST
Motif
Other DBs
NCBI-GeneID:
130567543
NCBI-ProteinID:
XP_057211714
LinkDB
All DBs
Position
LG16:complement(7253678..7265713)
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AA seq
735 aa
AA seq
DB search
MNVKSLINKYQTTKATQTKGEYTKQQKDTRRKDKLRRKTEIDRNKMKLETSLQDMNNWRE
VNFALNCTYIVHDQASEPSFGLPRAMTSIPRNLTFQYSADNQVIGVFSKEYIPQGTRFGP
LQGVIYTKDNVPPQSNRKYFWRIYSGGQLHHFIDGYDVQRSNWMRYVNPARSLAEQNLVA
CQNGQEIFFYTIQPVEPKEELLVWYSPEFSQRLCGRPEQPVSLKPKHMPDIAYEYHKQPL
PQYYPKQPPSPYKLQSEGEDDEVDEKIDVEVIERDTPPDTPDEQIIDCSAKILKAVPPGL
VHSPHLSQKELNKSAHPYPTLSPPHDLHLHGLYRHREGLISHPSLPSPRPLHAPYHLLSP
YNPHYPRLLLPPYSPPFPSVLPSKGYNSFLGTDGLPYSSIPQPGLLPVTLPYPTPLHGGL
KERIPNTPPQGAPATPELSPQPKHSPQQTSLKPLSKCEEAINLSVSSPRSASPTSSPSPS
APGYKSLPYPLKKQNGKIKYECNVCMKTFGQLSNLKVHLRVHSGERPFQCNLCKKSFTQL
AHLQKHHLVHTGEKPHECQVCHKRFSSTSNLKTHLRLHSGEKPYQCKLCGVKFTQYIHLK
LHRRLHSSRDRPHCCQACSRGFIHLFSLHLHQRSGCCTASSPEIPQLRRGAELVEQFDAS
HEAEALPETAGESEVDAALEKWLARSLESGEGKEDYGVLKGFAAAPRGVTAVGHHQERAS
VVHFNHRSSVKTEEE
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtcaaatctttgattaacaaataccagacaaccaaagcaacacaaaccaaagga
gaatataccaaacaacagaaagacacaagacgaaaagataaattgagaagaaagaccgag
attgatcgaaacaaaatgaagttggagacatctttgcaagacatgaacaactggagggag
gtaaacttcgccctgaactgcacctatattgtccacgaccaagcgtccgaacccagcttt
ggtctgccgagggccatgacctccatacctcggaatctcacctttcagtacagtgcagac
aaccaggtgattggtgtgttcagcaaagagtacatacctcagggtacacgatttgggccc
ttacaaggcgtcatctacaccaaagacaacgtgccccctcagtccaacaggaaatacttt
tggaggatttacagtggtggccagctacaccacttcattgatggctacgatgtgcagcgt
agtaactggatgcggtacgtcaacccagcacgctcgctggccgaacagaacctggtggcc
tgtcagaacggccaggaaatcttcttctacaccatccagccggtggagccgaaagaagaa
ctgctggtttggtacagtcctgagttctcccagagactgtgcggccggccagagcaacca
gtcagcctgaagccaaagcacatgccggatatcgcgtacgagtatcacaagcagccacta
cctcagtactacccgaaacaaccccccagcccgtacaaacttcagagcgagggagaggac
gatgaggtggacgaaaagattgacgtcgaggttattgaaagggacacgccacccgacacg
ccagacgagcaaatcatagattgcagcgcaaagatcctcaaagcagttccaccagggctt
gtgcattctccacatctaagtcaaaaggagctgaacaagagcgctcatccgtacccaaca
ctctccccaccacatgatctccacctacatggcctctatcgtcatcgggagggtttgatc
tcacacccttccttgccctcaccgagacctctgcatgctccctatcaccttttatcaccg
tacaacccgcattatccccgtttgcttctgcctccatattccccacccttcccctccgtg
ttgccctcgaaagggtacaatagctttttgggtactgatggcttaccctattcctccata
ccccaacctggcctgctacctgttactttgccctatcccaccccacttcatggaggtctg
aaggagagaatcccaaacacaccaccgcaaggagctccggcaactcctgaactctcccct
cagccgaagcactccccccagcagacctcgctgaagcctctttcaaaatgcgaggaggcc
ataaacctcagcgtgtcatcgcccaggagcgcatcacccacgtcctccccctctccatcg
gcccctgggtacaaatctctcccgtacccactcaagaaacaaaatgggaaaatcaaatat
gaatgcaacgtctgtatgaaaacattcggacagctatccaacctcaaagtgcacttgagg
gtccacagtggcgaaaggccattccagtgtaacttgtgtaaaaagagctttacccagtta
gcccatctccagaaacatcacctggtccacacaggagagaaaccacacgagtgccaggtg
tgtcacaaacgcttcagcagcactagtaacctgaagacccacctgcgtctgcactctggc
gaaaagccctatcagtgcaagctgtgtggggtgaaattcacccaatacatccacctcaaa
ctccaccgacggctgcacagctctcgcgaccgaccccactgctgccaggcctgctccaga
ggcttcatccatctcttctccctgcatcttcatcagcgctcgggctgctgtacggcctcc
agtcccgaaatcccacagctgagacgtggggcagagctggtggagcagttcgatgccagt
cacgaggctgaggccctgcctgagaccgctggagaaagtgaggtggatgccgctttggaa
aaatggctggccagaagtttggaaagtggtgaagggaaggaggactatggggtcctcaaa
ggattcgcagcggcgccacgaggggtgaccgctgtggggcatcaccaggagagagccagt
gtagtacacttcaaccatcggtcttctgttaagactgaggaggagtag
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