Triplophysa rosa: 130567662
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Entry
130567662 CDS
T09216
Symbol
mbd4
Name
(RefSeq) methyl-CpG-binding domain protein 4
KO
K10801
methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
tros
Triplophysa rosa
Pathway
tros03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
130567662 (mbd4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tros03036
]
130567662 (mbd4)
03400 DNA repair and recombination proteins [BR:
tros03400
]
130567662 (mbd4)
Chromosome and associated proteins [BR:
tros03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
130567662 (mbd4)
DNA repair and recombination proteins [BR:
tros03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
130567662 (mbd4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBD
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
130567662
NCBI-ProteinID:
XP_057211914
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All DBs
Position
LG17:1457829..1484860
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AA seq
380 aa
AA seq
DB search
MSTAEGADAELRICSQPQTAALAASGVPAGWVREMRARQNGRTVAPAGRVDVYMSSPEGR
SLRSKTRLQNNLLSEKDINLQFSDFNFTASSNHSRVTRAEQNSQQKKKGKPKIMDNSLLI
HGITRLEEMDGQEEVGERNDLEAKEDQIGDKHIVTLAVRPQSTSKCQEQSLLENTLEIPT
VREFKEENETSSNHVEHMSPSRNTESRLKVLAEKRTTSPYFSGRKDDLSPPKRKAFRKWT
PPRSPYHLVQETLFHDPWKLLVATIFLNKTSGKMAIPTLWQFFERYPNAEVTRVSDWRPL
ADLLQPLGLSNLRAKALVRFSDEYLNTSWRYPIELHGIGKYGNDSYRIFCVEEWREVTPN
DHKLKDYHTWLWENQERLGI
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacagctgaaggcgcagacgcagagctgcgtatatgcagtcagccgcagacggct
gcattagctgcatcaggtgttcctgcaggctgggtgagagagatgagagcaagacagaac
ggcagaactgtagcaccagccggaagagtcgatgtgtacatgagcagtcctgagggcaga
agcctcagatccaagactcgtcttcagaataatctgctctcagaaaaagacatcaacctg
caatttagtgacttcaacttcacagcatccagtaaccacagcagagtgactcgagctgaa
caaaacagccaacagaaaaagaaaggaaaacccaagattatggacaattctcttcttatt
catgggataacaagacttgaagaaatggatggtcaggaagaggttggcgaacgaaatgac
ctggaagcaaaggaagatcaaatcggagataaacatatagtgacacttgctgtaagacca
cagtctacttcaaagtgtcaagaacaaagtctgttagagaatacactggaaataccaact
gtaagagaatttaaagaagaaaatgagacgagctcaaaccatgtggaacatatgtcacct
tctagaaacacagaaagcaggttaaaggtattggcagagaaacgaacaactagcccatac
tttagtggaaggaaggatgatttgagtcccccaaagcgtaaggccttcaggaaatggacc
ccacctcgctcgccttaccatcttgttcaagaaacactgtttcatgacccctggaagctt
ctagtggccacaatatttctaaacaaaaccagtgggaagatggctattcccacgctgtgg
cagttttttgagcggtacccaaatgcagaagtgactcgagtgagtgactggagaccgctt
gctgacctgctgcagcctctggggctcagtaacctccgagcaaaggcactcgtacgcttt
tccgatgaatatctgaatacatcttggcggtatcctattgagttacacggcattggaaaa
tatggcaacgactcgtatcgtatcttctgtgtggaggagtggagagaggtcactccaaat
gaccataaactcaaggactatcacacgtggctgtgggaaaaccaggagagattaggaatc
tga
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