Triplophysa rosa: 130567842
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Entry
130567842 CDS
T09216
Symbol
xpc
Name
(RefSeq) DNA repair protein complementing XP-C cells isoform X1
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
tros
Triplophysa rosa
Pathway
tros03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
130567842 (xpc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tros03400
]
130567842 (xpc)
DNA repair and recombination proteins [BR:
tros03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
130567842 (xpc)
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Gene cluster
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Motif
Other DBs
NCBI-GeneID:
130567842
NCBI-ProteinID:
XP_057212284
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Position
LG17:complement(13425071..13432720)
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AA seq
869 aa
AA seq
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MAKRKYAVQKKNTKKPKQTNKQAPITQKIKENGIMAKNLKNSKVRSPVSKKGKNPSDGKT
SKYFQLGEPEEISDHSEEVSLVFIETSSPAKQVKEEEAESDEDEDWEEVEEMSEIDSTEL
EVPSKPVEIEIETPDMARKREKREKKKTEFETYLRRMMNRLNKELLEETHKVHLLCLLAS
GLYRNRLCCDPDLMAIALSILPNHFTTVETKRINVGFLEGLLKWFQMTFTLSPAIPEEKG
VELSTVLEKRIGCLSARDHEEMTYLLLLVLRSLRLFCRLVLSLQPLSFKPPPASKNKTKP
TKSPPTKNQKLSPNPKISPGSKRPSAETTAVKKEERGGKRRKKKEGGEKEALAGQKPKNS
RRRSIASKVSYKEDSSEEEEADESGEEFQPTKEDDSGDSDFEVMKLCMKSKGKEKSRAPL
SSSEIKEEDISGDEEEEEEEKVVKRRRSTRKEGKGADEWLEVYLESTGRWVCVDVNQGVG
QPLLCTDQATQPVTYVVGVDDEGYLKDLSSRYDPTWLTSSRRRRIDSEWWEETVELYKSP
DAVRGRQEDQEMQAKLFDKPLPTSIAEFKNHPLYALKRHLLKYEALYPPTAAILGYCRGE
PAYSRDCVHTLHSRDTWLKEARTVRLGEEPYKMVLGVSNRSRKARMMSEQKDVKDLPLFG
LWQTEEYQPPVAVDGKVPRNEFGNVHLFVPSMLPVGCVHLHLPNLHKVARKLNIDCAAAI
TGFDSYCGFSHAVTDGYVVCEEHQEILKAAWENEQDIQQKKEQEKREKRAVANWTLLVKG
LLIKERLKRRYGQQGLASKAVLKQAKEDHAEGLSSDEEEESGSQTAPASLAISWPQNRQE
EQEEKIERRVTRREKRGEQKHLFPFEKCD
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagagaaaatatgctgtgcaaaaaaagaacacaaagaaaccgaagcagacgaac
aagcaggcacccataacacagaaaatcaaagaaaatggcatcatggccaaaaacttaaaa
aactccaaagtcagatctcctgtatccaaaaagggtaaaaatccctctgatgggaaaacc
agtaaatattttcagctgggtgagccagaggaaatcagtgatcacagtgaggaagtaagt
cttgttttcatagagacctcatcaccagcaaaacaagtgaaagaagaggaggcagaaagt
gatgaagatgaggactgggaggaggtggaagagatgtcagagatagactcaacagaacta
gaagtaccatccaaacctgtggagattgagatagagactccagacatggctcgcaagaga
gagaaaagagagaaaaagaaaacagagtttgaaacttacctgcgacgaatgatgaaccgg
ttaaacaaggagctactagaggaaacacacaaggttcacctgctttgcttattggccagc
ggactttatcggaacagactctgctgtgatccagacctgatggctattgccttgtcaata
cttcctaaccactttaccacagttgagaccaaacgtataaacgtgggcttcctagaaggg
cttctgaaatggtttcagatgactttcacgttaagccccgccatacctgaggaaaagggg
gtggagcttagcacagtgctggagaagcggataggttgtttatcagcaagggaccatgag
gaaatgacttatctgttattattggtgctgaggtcattgcgactcttttgccgattggtg
ctgtcactacaaccgctgtctttcaagccaccacctgcctccaagaataagaccaaacct
accaaaagccctcctaccaaaaatcagaaactttccccaaatcctaaaatatcccctggg
tccaaacgcccatctgcagagaccactgcagttaagaaagaggaaaggggtggaaaaaga
cgaaaaaagaaagaaggaggtgagaaagaggcattggcaggacaaaaacccaaaaacagc
agaagaagaagcattgcatcaaaagtgtcttataaagaggacagcagtgaggaggaggaa
gccgatgagagcggggaggagtttcaaccaaccaaagaggatgatagtggagactcggat
tttgaggtcatgaaattatgcatgaagtcaaagggtaaagaaaagagtcgggcacctctg
agttcaagtgagatcaaagaggaggacataagtggagacgaagaagaagaggaggaagag
aaggtggtgaagagacgaagatctacaagaaaggaagggaaaggtgccgacgagtggttg
gaggtttatttggaaagtacaggaaggtgggtgtgcgtcgatgtgaatcaaggggttggt
cagccactgctgtgcactgatcaggcgacacagccagtaacctatgtggtgggtgtggat
gacgagggatacctgaaagatctcagcagcagatatgaccccacatggctgacatcatca
aggcgacgacgtatcgactctgaatggtgggaggagactgtggagctctacaaatctcca
gatgccgtgaggggaaggcaggaagaccaggagatgcaggcgaagttatttgacaagcca
ctgccaacatctatagctgaattcaagaaccatccactgtacgcgctaaagaggcattta
ctgaaatacgaggccctctatccccctacagcagctatattggggtattgtagaggagag
ccggcttactcacgagactgtgtgcacacgctgcattctagagacacctggcttaaggaa
gctagaactgttcgactaggagaagaaccatacaagatggtgcttggtgtttccaaccgt
tctcgtaaagccagaatgatgtcagagcaaaaggacgtgaaagatctgcctcttttcgga
ctctggcaaacagaagagtaccagcctccagttgccgtcgatggcaaggtaccacgtaat
gaatttggaaatgtgcacctgtttgtgccaagcatgttaccggtgggatgtgttcacctg
catttgccaaatctgcacaaagtggctcgaaaactaaacatcgactgtgctgcggcaata
actggctttgattcctattgtggattctcacatgctgttactgatggctatgtagtctgc
gaagaacaccaagaaattttaaaagcagcctgggaaaatgagcaagatattcagcagaag
aaagaacaagagaaacgtgagaaacgagcagttgctaactggaccctgctagtcaaaggc
ctgttgataaaggagaggctgaagcgtcgctatgggcagcaggggcttgcatcaaaggcg
gtgcttaagcaagcaaaagaagaccatgctgaagggctgtcctcagatgaggaggaagaa
agcgggtctcagacagcaccagcttctctggcgatttcctggccacagaacaggcaagag
gagcaggaagagaagattgaaaggcgtgtgactagacgagagaaacgtggagaacaaaaa
catctctttccttttgaaaagtgtgactga
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