Triplophysa rosa: 130567892
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Entry
130567892 CDS
T09216
Symbol
rnf180a
Name
(RefSeq) E3 ubiquitin-protein ligase RNF180 isoform X1
KO
K15708
E3 ubiquitin-protein ligase RNF180 [EC:
2.3.2.27
]
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tros04121
]
130567892 (rnf180a)
Enzymes [BR:
tros01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130567892 (rnf180a)
Ubiquitin system [BR:
tros04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130567892 (rnf180a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNF180_C
zf-RING_2
zf-C3HC4_3
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-RING_5
zf-RING_6
HA2_C
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
130567892
NCBI-ProteinID:
XP_057212355
LinkDB
All DBs
Position
LG17:complement(10605442..10613172)
Genome browser
AA seq
317 aa
AA seq
DB search
MLRSSHQSSPCRRTSPPAQTPHDRTSTLSRRTRLEPLESNIIRGSQISPEDWPFNRRAHL
MFLSSSEDEHEVGEQTGAATAELSVASSLLTPTPTRERRLSKRERRRLKSLRRRQKRRER
SRQSQLHENEQSSTGDPSSCSEDEELPGRDREGYNCAVCLDVYFSPYKCHPCSHIFCEPC
LRMLAKNCHTNTPCPLCRTTIKHVFFQKELNRTARTFFPKEYLSRKQAFQKSSCAKWPLP
SCRKLLRIFGGIQRQASPTGRRQFPAGGYRLDAFNFEDDSHGWRFDMDMVIIYIYSANWV
IGFIIFCLFCYFFFSSF
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgcttaggtccagccaccaatcttccccatgccgaaggactagcccacctgctcagact
ccccatgacagaaccagcacgctctctaggagaaccagactagaacctcttgagtcaaat
attataagaggctcacagatctctccagaggattggcctttcaaccgtagagctcatctg
atgtttctgagcagctctgaagatgaacacgaggttggagagcagactggcgcagcaaca
gcagagctcagcgtggcttcatccctacttacgcccactcccaccagggaacgcaggctg
agtaagagagagagaagacgactgaagagcctgaggagaagacagaagagaagagaacga
agcagacagagtcagctgcatgagaatgagcagagctctacaggggacccatctagctgc
agtgaggatgaggagctcccaggccgggatcgtgaaggctacaactgtgctgtatgtcta
gacgtctacttcagtccatacaagtgccacccatgcagtcatatcttctgtgaaccttgt
ctgcggatgctggccaagaactgccacaccaacacaccatgtccattgtgcaggaccacc
attaaacatgttttcttccagaaagaactgaaccgcacagcccgtacgttcttcccaaag
gaatacctgtctcggaagcaggccttccagaaatcaagctgcgcaaaatggccccttccg
agctgccgtaaactgcttagaatatttggaggcattcaaagacaggcaagtccaactggc
agacggcagttccctgccgggggctacaggcttgatgccttcaactttgaggatgattcg
catggctggcgatttgacatggacatggtgatcatttatatatactctgccaactgggtc
attggcttcattatcttctgcttgttctgctacttcttcttctcttccttttga
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