Triplophysa rosa: 130567982
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Entry
130567982 CDS
T09216
Symbol
rbm39b
Name
(RefSeq) RNA-binding protein 39b
KO
K13091
RNA-binding protein 23/39
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tros03041
]
130567982 (rbm39b)
Spliceosome [BR:
tros03041
]
Common components
Common spliceosomal components
General mRNP proteins
130567982 (rbm39b)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_5
RRM_7
RSRP
Motif
Other DBs
NCBI-GeneID:
130567982
NCBI-ProteinID:
XP_057212545
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All DBs
Position
LG17:6850520..6865451
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AA seq
521 aa
AA seq
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MADDFDVEAMLEAPFKKGESKTSSANGHDGDRKKKKRHSNSPSPDRRRSRSREQKKSRER
RRSRSRESRRSKSKERRRSPLRNRGGGRYRGRRSPFMGQKINGGSGGKTGPQHFTKHSRK
RSRSKSPFKKDKTPVRQPIDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVR
MISDRNSRRSKGIAYIEFVDSTSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMALNLQ
RGGIGPMRLYVGSLHFNITEDMLRGIFEPFGKIEGIQLMMDNETGRSKGYGFISFADAEC
AKKALDQLNGFELAGRPMKVGHVTERTDASNASSFLDNDELERTGIDLGTTGRLQLMARL
AEGTGLQIPHAAKQALQMSGSAAFANATGTVQAPILPNPGMNQAMNLPTQPLATQCLQLS
NMFNPQSEDEPGWDVEIQDDVIDECNKQGGVVHIYVDKNSPQGNVYVKCQSIPVAMTVVS
ALHGRWFAGKMITAAYVPLPTYHNLFPDSVTATQLLRPTRR
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgacttcgatgttgaggccatgctggaagctccttttaagaagggagaaagc
aagacctccagtgccaacggtcacgatggcgatcgcaagaaaaagaaaagacacagcaac
agtcccagtccagaccgccggaggagcaggagcagggagcaaaagaagagccgagaacgc
cgcaggagtcgcagccgtgagtccagacgatcgaagagtaaagaacgcaggcgttcgcca
ttacgcaaccgggggggcggacgttaccgtggacgcaggagcccatttatggggcagaaa
ataaacggtggttccggaggcaagactggcccacagcatttcaccaagcacagtcgcaag
cgctcccgaagcaaaagcccattcaagaaggacaagaccccagtcaggcaaccgatagat
aatctgagcccggaggaaagagacgcccgcacagtgttctgcatgcagctggctgccaga
attaggcccagagatctagaagacttcttctcagcagtaggaaaagttcgtgacgtgagg
atgatctcagatagaaactctcggaggtcaaagggcattgcctacattgagtttgtagat
tcgacctcagttccgctggccattggactgacggggcaacgtgttctgggagtgccaatc
atagtccaggcttcacaggctgagaagaacagagcagcagccatggccttaaacctccag
aggggaggcatcggaccaatgcggctgtatgtgggctccctgcacttcaatatcaccgaa
gacatgctcaggggcatctttgagcctttcggcaagattgaaggcatccagctgatgatg
gacaatgagacgggcaggtcgaaaggatacggcttcatatcatttgcagatgcagaatgt
gctaaaaaggccttggatcagctgaatggatttgagctcgctgggcggccgatgaaggtg
ggtcacgttaccgaacgcactgatgcctccaacgccagctccttcctggataatgatgag
ctggagagaactggcattgacctgggcacaacgggccgtcttcagctgatggctagactg
gcagagggtacaggattgcagattcctcatgctgccaaacaagctctacagatgagtggc
tctgcggcttttgcaaatgccacaggtactgttcaagctcctattctccctaatcctggg
atgaatcaagccatgaaccttccgacccagccactggccacacagtgtttacagctgtct
aacatgttcaatccacaatcggaagatgaacctggctgggacgtcgagatacaggacgat
gtcattgatgagtgcaataaacaaggaggcgttgttcacatatacgtcgacaagaactct
cctcaaggaaatgtttatgtaaaatgtcagagcatccccgttgcaatgactgtcgtcagc
gccctgcacgggcggtggtttgcaggtaaaatgatcacagctgcctacgtgcctctcccc
acttaccataacctgtttccagactcagtcacagctacacagctcctcaggcccacacgc
cggtga
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