Triplophysa rosa: 130567987
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Entry
130567987 CDS
T09216
Symbol
cxxc1a
Name
(RefSeq) CXXC-type zinc finger protein 1a isoform X1
KO
K14960
COMPASS component SPP1
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tros03000
]
130567987 (cxxc1a)
03036 Chromosome and associated proteins [BR:
tros03036
]
130567987 (cxxc1a)
Transcription factors [BR:
tros03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
130567987 (cxxc1a)
Chromosome and associated proteins [BR:
tros03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
130567987 (cxxc1a)
COMPASS/SET1 complex (yeast)
130567987 (cxxc1a)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CpG_bind_C
zf-CXXC
PHD
PHD_5
NBAS_11th
Gal4_dimer
Motif
Other DBs
NCBI-GeneID:
130567987
NCBI-ProteinID:
XP_057212553
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Position
LG17:complement(20810355..20818124)
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AA seq
568 aa
AA seq
DB search
MDSEVSDFDQPPGQEKLDRRNAPVFCVCRRPDINCFMIGCDSCNEWFHGDCIHISEKTAK
TIRVWYCEKCRSKDPSLEIKYRPKKSREKELEPDRTDSQPDTPDFKTDGRRGSRIKRSAR
MCGECEPCMRTEDCGLCDFCKDMKKFGGPNRIRQKCRLRQCEVRARKMLRVKDEEYSMSK
DRDYHYHDGELSEDYSENEMELYQQYCAGQYGDHSTGWNSDDDDGSYCDSSMRNRAVKVK
HVKRREKRSEKKKEESKSRKHKPKQKHRDRVRHSERAEVRDSGGARQCLGPGCVEAARVN
SKYCSDSCGRKLAANRICEILPQRIQQWQQSPCIAEEQGKKLLERIRREQQAARMRLTEM
EKRFHELEGIIAKAKQQVVQHDEEVNEGDDDTDLQIFCVSCSHPVNPKVALRHMERCYAK
YESQTSFGSMYPTRIEGATRLFCDVYNPQSKTYCKRLQVLCPEHSRDPKVPADEVCGCPL
VRDVFEPTGEYCRVSKRKCNKHYCWEKLRRAEVDLERVRVWYKLDELFEQERNVRTAMTN
RAGLMALMLHQTIQHDPITTDLRTSKDR
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggacagcgaagtttcagactttgatcaacctccaggacaagagaagctggacaggaga
aacgcacccgtgttttgtgtttgtcgcagaccagacatcaactgcttcatgattggttgt
gacagctgcaatgaatggtttcatggagattgcattcatatatcagagaagacggccaaa
accatccgtgtctggtactgtgaaaagtgtcgaagtaaagatccatccttggagatcaaa
tatcgtcccaagaaaagcagagaaaaagaactcgagcctgaccgtacagacagtcaacca
gacactccggatttcaagacagatgggcggcgcgggtcacggattaagcgttctgctcgc
atgtgtggagaatgtgaaccctgcatgcgcactgaagactgtggactatgtgacttctgt
aaagacatgaagaagttcggcggcccaaacaggatcaggcagaaatgtcgcctgagacag
tgtgaagtgcgcgccaggaaaatgttacgagtaaaggatgaggaatattccatgtctaag
gacagagactatcactatcacgatggtgagctgtctgaagactacagtgaaaatgagatg
gagctctaccaacagtactgtgccggccagtacggagaccacagcacgggttggaacagt
gacgacgatgacggttcgtactgtgattcatccatgagaaacagagccgtgaaggtcaag
catgtgaaaagaagagaaaagcgatctgaaaaaaagaaagaggagagtaagtcccggaag
cacaaacccaaacagaagcacagggacagggtgagacacagcgagcgggcagaggttcga
gacagcggaggggccagacagtgtctcggacccggatgtgttgaagctgcacgtgtcaac
tccaaatactgctctgacagctgcggtaggaagcttgctgccaaccgcatctgtgagatc
ttgccgcagcgcattcagcagtggcagcagagcccgtgcatcgccgaggaacaggggaag
aaacttctggagcgcattcgccgcgagcaacaggcggctcgcatgagactcactgaaatg
gagaaacggtttcacgagctggagggcatcatcgccaaagccaagcagcaggtcgtacag
catgatgaagaggtgaatgagggtgatgatgacacagatttgcaaatcttctgtgtgtcc
tgcagtcacccggtgaaccccaaggtggcgctgcgtcacatggaaaggtgctacgccaag
tatgagagtcaaacatcatttggctccatgtatcccacacgtatagaaggtgctacgcgg
ctcttttgtgatgtttacaatccacagagtaaaacctattgcaagaggttacaggttctc
tgtccagagcactccagagacccaaaggtccctgcagatgaagtctgtggttgtccactg
gtccgtgatgtatttgagcccaccggtgagtactgcagggtgtccaaacgcaagtgtaac
aaacactactgctgggagaaactccgcagggctgaagtggaccttgagcgagtcagagtg
tggtacaagttggatgaattgttcgagcaggaacgcaacgtaagaacagccatgacaaat
cgtgctggtctcatggccctcatgcttcaccagaccattcaacatgaccccattaccaca
gacctgagaaccagcaaggacagataa
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