Triplophysa rosa: 130568077
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Entry
130568077 CDS
T09216
Symbol
hcfc1b
Name
(RefSeq) host cell factor 1b
KO
K14966
host cell factor 1
Organism
tros
Triplophysa rosa
Pathway
tros03083
Polycomb repressive complex
tros04980
Cobalamin transport and metabolism
tros05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
130568077 (hcfc1b)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
130568077 (hcfc1b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
130568077 (hcfc1b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tros01009
]
130568077 (hcfc1b)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tros03036
]
130568077 (hcfc1b)
03029 Mitochondrial biogenesis [BR:
tros03029
]
130568077 (hcfc1b)
Protein phosphatases and associated proteins [BR:
tros01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
130568077 (hcfc1b)
Chromosome and associated proteins [BR:
tros03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
130568077 (hcfc1b)
HMT complexes
COMPASS/SET1 complex
130568077 (hcfc1b)
MLL-HCF complex
130568077 (hcfc1b)
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
130568077 (hcfc1b)
Mitochondrial biogenesis [BR:
tros03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
130568077 (hcfc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_3
Kelch_5
Kelch_4
Kelch_1
Kelch_6
fn3
Motif
Other DBs
NCBI-GeneID:
130568077
NCBI-ProteinID:
XP_057212706
LinkDB
All DBs
Position
LG17:20915738..20933607
Genome browser
AA seq
2001 aa
AA seq
DB search
MASSGTTVLQPRWKRVLGWSGPVPRPRHGHRAVAIKELMVVFGGGNEGIVDELHVYNTAT
NQWFIPAVRGDIPPGCAAYGFVCDGTRLLAFGGMVEYGKYSNDLYELQASRWEWKRLKPK
APKNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYTLELRPGSSAGG
WDIPITYGVLPPPRESHTAVVYTEKTSKKSRLIIYGGMSGCRLGDLWTLDIDTLTWNKPA
ISGTAPLPRSLHSATTITNKMFVFGGWVPLVMDDVKVATHEKEWKCTNTLACLNLDAMSW
ETILMDTLEDNIPRARAGHCSVAINNRLYVWSGRDGYRKAWNNQVCCKDLWYLETDRPQA
PSRVQLVRANTNSLEVSWGAVPTADTYLLQLQKYDIPAAMAATSPTATHTPSLPTNSPKS
PVPAAAAPATQSMPLSGVTLLQQVPSPTTSMPSSPLAASPRGPAILKVAAPHSAAGASVV
TVHQATPGSKSPVTVTSLPAGVRMVVPAQSTQGTPIGSSPQMSGMAALAAAAAATQKIPP
SSTTTVLNVPAGATIMKTVAMTPGSTTLPANVKVASPIMVTNPATRMLKTAAAQVGTSAI
TTPNTPTRPIITVHKSGTVTVAQQAQVVTTMVGGVTKTITLVKSPITMGSGGTLLSSLGK
MMSVVQTKPVQTSAVTGQAGSSPVTLIQTKTPLPAGTILKLVTSADGKPTTIITTSQAGG
TGTKPTILGISSVSPTTAKPGTTYIKTIPMSAIQQGAAGLTSSAGIKSPYTIITTKVGTP
GTGTPGKFITTVPKLTGAGQHGVTQVVLKGVPGQPGTILRTLPMGGVRLVSPGTVSAGKP
TVTTLVVKGTTGVTTLGTVTGTVSTSGVGGSVASTIASLATPVTTLAPVTTLSSQVINPA
AITVSAAQTSLATTTIQSAAQPTKVTLITTPSGAEDQPAQDLPVSILASPTSDQPSNTGA
DAGDAAGEGAATVTIICSNPPCETHETGTTNTATTASAKICSNPPCETHVTGTTNTATTA
SANMGGVQQVCTNPPSETHDTGTTNTATTASCNMGSTEMGTVNSKTESSTAGTSSASVSE
PAGSAGEGGSAGEGGSAAEGGSASGTMRPENQRTGTTNTSTTASCNMGSTEMGTVNSKTE
SSTAGTSSASVSEPAGSAAEGESAAEGSSASGTMRPENHRTGTTNTSTTARSNMGSDQTG
TVQSSSKSQAAISSTMLPLCSSPSSETLQTSTANPDALSAPGDVEQDCSNPPCETQETVT
TNSATQSTSAMGNVQTNVAQRVCSNPPCETHETVTTNTPTPASSNIGAGQNATVQRLCSN
PPCETHETGTTNTPTQASSTIGDGQNATVQRVCSNPPCETHETGTTNTPTQSSSSIGPEQ
NATVQRVCSNPPCETHETGTTSTATTATSSLETGDGTAQQGGEEQVDSGTSSEPTSSTEP
ANPTTQSRAITTVTQATPTPGPSVPEISSMAGSAVVAEVPGESEAMEQTSAEAAAAGEEP
MQTECQGDLGEEAAVRVVAIDEAADEGTMVQVHVAMEAQPGQGDQDEQMEAGVEGTEAMS
LAPQDSDALSLPQELMSAEGQQTTLMVTGLTPEELAVTAAAEAAAQAAATEEAQALAIQA
VLQAAQQAVLSGNAGQEQRSTTIPIVLTQQELAALVQQQQQLQAAAAQQLSAEAAAAALP
TEGLAPADSLNDPASESNGHEMATAVTAAVASLLPRAAAETVAPSSTFALSQPMVVASPA
KMQAATALAEVANGIESASGKQAAPPAVVKPPVKKENQWFDVGIVKVTNTVVTHYYVPAD
DSAVTDDDSGAMPDYSRMKKIELSPGTAYKFRVAGINACGRGTFSEVSAFKTCLPGFPGA
PCAIKISKSPDGAHLTWEPPSVTSGKIIEYSVYLAIQSSQTVEAKASAPAQLAFMRVYCG
PSPSCLVQSSSLSNAHIDYTTKPAIIFRIAARNEKGYGPATQVRWLQETSKDGSAAKPAA
KRPVSSPDMKGTGMKKARSDQ
NT seq
6006 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttcaggcacaacggttctgcagccgcgctggaagagagttctgggctggtcc
ggcccggttccgcgcccgagacacggacaccgagctgtggccattaaagagctgatggtg
gtgttcggcggagggaatgaagggattgtggatgagctgcacgtttataacacagcgacc
aatcagtggtttattcctgctgtccggggggacattcctcctggctgtgctgcatatggg
tttgtgtgtgatggcaccagacttcttgccttcgggggtatggtcgagtatggaaagtac
agcaatgacctttatgaactacaggccagtcgatgggagtggaaacggttgaagccaaaa
gctcctaaaaatggaccaccgccttgtccccgtctgggtcacagtttttctctcgttgga
aacaaatgctatttgtttggcgggcttgctaatgacagtgaagatcccaaaaacaatatt
ccaagatacttaaatgacctgtacacactggagcttcgtccgggatcaagcgcaggaggc
tgggacatccctattacatacggcgtgctgccgccacctcgtgagagccacacagctgtt
gtttacacagagaaaacatccaaaaagtctcgtctcatcatctacggtggtatgagtggg
tgccgccttggagacctctggactttagacatagatactttgacctggaacaaacccgct
ataagtggcacagcacctctgccccgcagtctgcactctgccaccactataaccaacaag
atgtttgtatttggtggatgggtccctctggttatggatgatgtcaaagtggcaactcat
gagaaagaatggaagtgcactaacacattggcatgcttaaatctagatgcaatgtcttgg
gaaactatcttgatggacacactagaggataatatcccaagggccagagctggacactgt
tcagtggccattaacaacaggctgtacgtctggagtggcagggatggctaccgcaaagcc
tggaacaatcaagtttgctgcaaggatctttggtacctggagacagatcgtcctcaggcc
ccgtcgcgggtacagctggtccgtgccaacaccaactctcttgaggtcagttggggggcg
gtgcccactgctgacacttacctgctacagctgcagaaatatgacatccctgctgcaatg
gctgccacatctccgactgccacccacaccccttctttaccgacaaactcgcccaagagc
cctgttcccgctgctgccgcgcctgccactcagagcatgcccctgtctggggtcacgctg
ttacaacaagttccttcacccaccacctccatgccaagcagtccgctggcagcctcaccc
cgtggaccagctattcttaaagtggcagcacctcattcagcagctggggcttcagttgtt
actgtgcaccaggcaaccccagggagcaaatctccagtcacagttacatcacttcctgcg
ggagtccgcatggttgtccctgcgcagagcacccaaggaactccaatcggcagcagccct
cagatgagcggcatggctgctttggctgcagctgcagctgccacacagaagatcccgccc
tcttccacaaccactgtgctaaatgttccagctggagcaaccatcatgaaaactgttgct
atgactccgggatccacaactttaccggctaatgtcaaagtagcttcacctataatggtt
actaaccctgctacccgaatgctgaaaacggcagcggcacaggttggcacttcagccatc
actactcccaacaccccgacacgccccatcatcactgtacacaaatcaggcacggtgact
gtggctcagcaggctcaggtcgtcaccacaatggttggaggagtcaccaaaactataact
cttgttaagagccccatcactatgggtagcggtggcactctgctctccagccttggaaaa
atgatgtctgtcgttcagacaaaaccagtgcaaacctctgctgtgactgggcaggctgga
agcagtcccgtcacactaatacagacaaagactcctttgcccgccggtaccatcctgaag
ctggtgacttctgcagatggcaagcccactaccatcattacaacgtctcaggcaggagga
accggaacgaagcccactatactgggcatcagcagtgtctctccaaccaccgccaaacca
ggaacaacctatattaaaaccattcccatgtctgccattcaacaaggagcagcaggtttg
accagcagtgctggcatcaaatccccctacacaattatcaccaccaaagttggcactcct
ggcacaggcacacctggcaaattcataaccactgtgcctaagctgacaggcgctggacaa
catggagtcacgcaggtggtcttgaagggggtaccgggtcagccaggcaccatcctgcgc
acacttcctatgggtggagtgcgtctggtttctccaggcactgtgtcagctgggaaaccc
actgttacgacactggtggtcaagggcaccacaggtgtcacgactttgggtacagtgact
ggtactgtgtccaccagtggggttgggggcagtgtggcaagcacaatcgccagcctggca
actcccgtcaccacccttgcccctgtaactactttatccagccaagttatcaatccagcg
gctatcactgtatctgctgcacagacaagcctcgccaccaccacgatacaatctgctgca
cagcctactaaagttactctgatcaccacaccaagtggtgctgaggatcagcccgcacag
gatcttcctgtttctatcctggcatctcccacctctgatcagccctccaacactggtgct
gatgctggtgatgccgctggcgaaggtgctgctaccgttactatcatctgctccaaccca
ccatgcgagacccacgagaccggaacgaccaatacggctacaacagcttctgccaagatc
tgttccaaccctccctgcgaaacgcacgtcacaggcaccaccaacacggccacgactgcc
tctgctaacatgggcggagtgcagcaggtgtgcaccaacccaccctcagagacacacgac
acgggcaccaccaacacagccaccactgccagctgcaacatgggctctacagagatgggc
acggtgaacagcaagacagagtcttctacggcgggtacatcctcagcctctgtttcggaa
ccagcgggttctgctggggaaggcggttctgctggggaaggcggttctgctgcggaaggc
ggttctgcatctggcaccatgcgtcctgagaatcaacgcacgggtaccaccaacacctcc
accactgccagctgcaacatgggctctacagagatgggcacagtgaacagcaagacagag
tcttctacggcgggtacatcctcagcctctgtttcggaaccagcagggtctgctgcggaa
ggcgagtctgctgcggaaggcagttctgcatctggcaccatgcgtccggagaatcaccgc
acgggtaccaccaacacctccaccactgctcgctccaacatgggctctgatcagacagga
acagttcagagctccagcaagagccaagctgcaatctcttccacgatgttgcctctctgt
tccagcccctcttcagagacgctccagaccagcactgcaaacccggatgccttgtctgct
ccaggagatgtcgaacaagactgctcaaatccaccttgtgagacacaagaaacagtcaca
accaatagtgctacacaatcaacctctgcgatgggcaatgtgcaaaccaatgttgcgcag
agggtgtgctctaatccaccttgtgaaacccatgagacggtcactaccaacacacccacc
ccagcctcatctaatattggcgctggtcagaatgccactgtgcaaaggctatgttccaat
ccgccctgcgaaacccatgagaccggcactaccaacacacccacccaggcctcatctact
attggtgacggacagaatgccactgtgcaaagggtatgttccaatccaccctgcgaaacc
cacgagacgggcactaccaacacgccaacccaatcttcatctagtattggtcctgaacaa
aatgccactgtgcaaagggtatgttccaatccaccctgcgaaacccacgaaactggtact
acaagtacagccaccacagctaccagcagcttagaaactggagatggtactgctcagcag
ggtggtgaagaacaggttgacagtggaaccagctcagaacccacgtcctctacagaacca
gccaatcccacaacacaaagcagagccatcaccacagtgacacaagccacacccactcca
ggaccatcagtaccggagatctcatccatggctggttctgcagtagtggctgaggttcca
ggagagtcagaggctatggagcagaccagtgctgaagctgcggccgctggagaagaaccc
atgcagacagagtgccagggagacctgggtgaggaagcagccgtcagggtggttgccata
gatgaagctgcggatgagggcaccatggtgcaagttcatgttgccatggaagcgcagcca
ggccagggagatcaggatgagcagatggaggctggtgttgagggcacagaagcgatgagt
cttgctcctcaggactcagacgccctctctctacctcaggagctgatgtctgcagaaggt
cagcaaactaccctcatggtgaccggactgaccccggaagagctggctgtgactgcagcc
gctgaggcagctgcgcaggcagcagctacagaggaggcccaggccctcgccatccaagcc
gtactgcaggcagctcaacaggctgtgctcagcggaaatgcaggtcaggagcagcggtcc
accaccatccctatcgtcctgacacagcaggaactcgcagctctcgttcagcagcagcaa
cagctgcaggcagccgcagcccagcagctgagtgccgaagcggccgcagctgcgctgccc
accgagggtttggctccagcagacagcctcaacgaccctgcatctgagagcaacggacac
gagatggcgactgccgttacggcagctgtggccagtctcttaccgcgtgctgctgctgaa
actgtggccccatcgagtactttcgcactatctcagcccatggtggtcgccagccctgct
aagatgcaagcggccactgctttagctgaagtggccaatgggatcgagtcagcatctggg
aagcaagcagcccctccagcagtggtgaagccacctgtgaagaaagagaatcagtggttt
gatgttggtatcgtcaaggttacgaacacggttgtcactcactattacgtgccggcagat
gattcggctgttactgatgatgactctggtgccatgccggactacagccgaatgaagaag
atagaactgtctcctggcactgcgtacaagttccgtgtagctggtatcaatgcgtgcggt
cgtggaacgttctccgaggtctccgcttttaagacctgcttacctggcttccctggagca
ccgtgtgccatcaaaatcagcaagagccctgatggtgcccacctgacctgggagcctcct
tcagtgacatcagggaagatcatagagtattcagtgtatctggccatacagagctcgcag
acagtcgaggcgaaagcgtctgctccggcacagcttgcctttatgcgggtgtactgtgga
cccagtccatcctgcctggtgcagtcgtctagtctctccaacgcccacatcgactacacc
accaaacccgccatcatcttccgcattgccgcccgtaacgagaagggctatggtcccgcc
acgcaagtcaggtggctgcaagaaaccagtaaggacggttccgcagccaaaccagcagca
aagagaccagtgtcttcacctgatatgaaaggcaccggtatgaagaaagccagatctgac
cagtga
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