Triplophysa rosa: 130568093
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Entry
130568093 CDS
T09216
Symbol
lrsam1
Name
(RefSeq) E3 ubiquitin-protein ligase LRSAM1
KO
K10641
E3 ubiquitin-protein ligase LRSAM1 [EC:
2.3.2.27
]
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tros04131
]
130568093 (lrsam1)
04121 Ubiquitin system [BR:
tros04121
]
130568093 (lrsam1)
Enzymes [BR:
tros01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130568093 (lrsam1)
Membrane trafficking [BR:
tros04131
]
Autophagy
Xenophagy
Other xenophagy associated proteins
130568093 (lrsam1)
Ubiquitin system [BR:
tros04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130568093 (lrsam1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_14
LRR_8
zf-C3HC4_3
LRR_4
LRR_1
SAM_1
Prok-RING_4
SAM_2
zf-RING_2
LRR_LRWD1
Goodbye
Motif
Other DBs
NCBI-GeneID:
130568093
NCBI-ProteinID:
XP_057212734
LinkDB
All DBs
Position
LG2:22298515..22310484
Genome browser
AA seq
724 aa
AA seq
DB search
MFLFSKKKKPSEDSKKRLENQLCLAKEAGADDILDISSCELTEVPSCAISLCKVLQKKVF
IFHGNYLRSFIPKGCCISALATLKVLDLHENKLTSLPDDIGQLLSLQVLNVEKNHIKQLP
DSIGDLRHLQTLNVKANCLTVIPVSVGRMSSLRTLDLSENSILELPKELACVRTLESLIL
DAHVMTYPPSSVCMGGTEEVQRYLCSEMGLEYCPPSQYLLPVLEHDGTKQEVDCVDGEEM
AWQNKMMDYEKRKEEKKQEKLIFEKELEEKQREQAQFLVLNNSRKEDILLSVRQAQERLE
LGVSQQQKAQEAVRLKILDKVRQAESTLMSRVSDLLLDNKRQERSAAFLQALEEDRIRME
HLTAITQEEADSLRKKEVASAMQRMLFESCSLRLMQEASDARKQILVSEASRSLQWLDKK
FDQVLSLQQLDKNKAISQILREEEMQKAAFEALQLQKDSVHAYIRNQIKLIEAELMQLTK
LEVKRRNLDTENLQEVLAEQRTALTDLLQQLFKQKDQREEELRQVLAEMELKSESNQQNY
WMIQYQRLLDAKPLSLRMQEMAVDRELGNLLCKLSAQHYLPIIAHHRITAEALRHMTTKD
LSKLGINEVGVQKALLHWARERTFSDPLPKTAREETGPSASNPQQQQQLTPPLTPNTPNS
PPTPTAPSSDGPSSSECVVCMEHESQMIFLPCGHVCCCQTCSDALQSCPLCRASVSQRIR
LYHG
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgtttctgttctcgaaaaagaagaaacccagtgaggattccaagaagcgacttgagaac
cagctgtgcttggccaaagaagcaggtgcagatgatattctggatatttcttcttgtgaa
cttacagaggttccttcatgtgccatctccctttgtaaagtgctccagaaaaaagtgttc
attttccatggaaattacctgagatcatttatacctaaaggttgctgcattagtgcctta
gcaacgttaaaggttttagacctccatgaaaataaactcacatcgcttcctgatgacatt
gggcagcttttgtccttgcaggtgctgaatgtggagaagaatcacataaaacagctgcca
gactctataggggatctaaggcatctacagacacttaatgtgaaagcaaactgtcttact
gtgattcctgtgtctgtgggtcgcatgagcagtctgcgaacactggacctaagtgaaaac
agcatcctagaactgcccaaagagctggcctgtgttcgcactctggaaagtcttatcctg
gatgcacatgttatgacctatcctccttcatcagtgtgtatgggcggcacagaggaagtg
cagcgttacctctgttcagagatgggtctagagtattgccctccatcccagtatctcctg
cctgtgctggagcatgatggaacgaaacaggaggttgattgtgttgacggtgaggagatg
gcctggcagaacaaaatgatggactatgagaagagaaaggaggagaaaaagcaggaaaag
ttgatctttgagaaggagctagaggagaaacagagagagcaagctcaattccttgtcctc
aacaactctcgtaaagaagacatattgttgtccgtcagacaggcgcaggagcggttagaa
ttaggtgtgtctcagcagcagaaggcccaagaagcagtgaggctaaagatacttgataaa
gtccgtcaggcagagagcaccttgatgagtcgtgtctctgaccttctgcttgataacaaa
cgacaagaaaggagtgctgcctttctgcaagctctagaggaggaccgaatacgaatggaa
caccttacagccatcacacaggaagaagcggactctttgaggaagaaagaagtggcaagt
gccatgcagaggatgctgtttgagagttgctctctacggttaatgcaggaagccagtgac
gccagaaaacagattctggtgtctgaggccagcaggagtttgcagtggttggataaaaaa
tttgaccaagttttgtccctgcagcagctagacaaaaacaaagccattagtcagatcctc
cgagaggaggaaatgcagaaagctgcttttgaggcccttcagctccagaaggacagtgtg
cacgcttacatccgcaatcagattaaactcattgaggcagagttaatgcagttgacaaag
ctggaggttaaaaggaggaatttggacactgagaacctgcaggaggtgctggctgagcag
aggacagctctgacagatctactgcagcagttattcaaacagaaggaccagagggaggag
gagctcaggcaggtcctggccgagatggaactgaagagtgaatccaatcaacaaaactac
tggatgatacaatatcagagactcctggatgctaaaccactatctctgcgtatgcaggag
atggccgtggatagagagcttggcaatctgttgtgtaaactttctgctcaacactacctg
ccaatcatagctcatcatcgaatcactgctgaggccttgcgtcacatgaccactaaagat
cttagcaagctggggatcaatgaggtcggtgtgcagaaagctcttcttcactgggccagg
gaacgcaccttttctgacccactgcctaaaacagccagagaggaaactggaccgtctgct
tctaaccctcaacagcaacagcagctcactccaccactgacacccaacaccccaaatagc
ccccccacacccactgccccgagttctgatggacccagcagctcagagtgtgtggtgtgc
atggagcatgagtcacagatgatctttctgccttgtgggcatgtgtgctgttgccagacc
tgcagcgacgctctgcagtcctgcccactgtgtcgagcttctgtatctcaacggatccgc
ctctaccatggctga
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integrated database retrieval system
