Triplophysa rosa: 130568254
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Entry
130568254 CDS
T09216
Symbol
apex2
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase 2 isoform X1
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tros03400
]
130568254 (apex2)
Enzymes [BR:
tros01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
130568254 (apex2)
DNA repair and recombination proteins [BR:
tros03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
130568254 (apex2)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Motif
Other DBs
NCBI-GeneID:
130568254
NCBI-ProteinID:
XP_057212979
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Position
LG17:15043714..15046366
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AA seq
575 aa
AA seq
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MKIVTWNINGIRTFKSGIKKILDSFEADIICVQETKVTRDLLEENTAIVDGYNSYFSFSR
GRCGYSGVATYCKDSATPFLAEEGLTGLLITHEEAVGCYGDQLEFSSEELLALDNEGRAV
ITQHHFTGADGPQKLTVINVYCPRADPDKPERKQYKLQFYKLLQSRAEAILRSGRFMFFF
INASLFSHVIVLGDVNTSHRPIDHCDPDDVDNFEDNPARKWLGHFLSAAIEKGDTEDEFG
NISQKSASGGKFVDSFRHFHPKRSDAFTCWSTMTGARQTNYGTRIDYIFSNRFLVENVFS
GADIMPEVEGSDHCPVWAQLSCTLLPSPKFPPLCTRHMPEFTGRQQKLSRFFVKVSEKQN
VSKGSKESLPGSQEAGEIRENLNPVVQGNNTIKKRPADKEAETNAHKAKKSKLTKTESKP
KGNLLAFFKPKQTPLNPPSPKLNPDPGSESSGCLTNAKLTDYTHCNSTQTKNSDVPTDTC
VSMVTETKNQDQQDKETAPVEMCRKGPCSSFWKEVLRGPPQPPLCKSHNEPCVLRIVKKA
GPNLSRQFFVCARPQGHASNPQARCNFFAWVDKGK
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgaagattgtaacttggaacataaacgggatacgaacgttcaaaagtggcatcaagaaa
attctggattcatttgaagctgatataatctgcgtccaagagactaaagttacccgtgac
ctgctggaggaaaatacagcgattgtggatggctacaattcttattttagttttagccga
ggacgatgtggatactcgggtgtagcaacctactgtaaagatagtgctacaccattcctg
gcagaggaaggattgacaggtctgctcatcactcatgaagaggctgtcggttgctatggt
gaccagcttgagttttcaagtgaagagttgctggccttagacaacgagggaagggctgtc
atcacccagcatcacttcactggtgcagatggacctcaaaagttgactgtgattaatgtt
tactgcccacgagctgatccagacaaacctgagagaaaacagtacaagctccagttttat
aagcttctccaaagcagagctgaagccatcttgcgctcaggaagattcatgttctttttt
atcaatgcatcactcttcagtcatgtaatcgtgttgggggatgtgaacacctctcatcga
cccatagaccactgtgacccagatgatgtggataactttgaggataatcctgccagaaag
tggctgggccatttcctgtctgcagcaatagaaaagggtgacactgaagatgaatttgga
aatatctctcagaaatctgcctcgggtggcaagtttgttgacagctttcgtcatttccac
ccaaagcggtctgatgccttcacgtgctggtccacaatgactggtgccagacagaccaac
tatggcacacgtatcgattacatcttctccaatcgctttctggtggagaacgtcttcagt
ggagcggatatcatgccagaggtagagggatctgatcactgccctgtatgggcacaactt
agctgtaccctcctacctagtcccaagtttccacctctatgcacacgtcacatgccagaa
tttactggcagacagcagaaactttcacgtttttttgtcaaggtttctgaaaaacagaac
gtatctaaaggctctaaagagagtcttcctggatcacaggaggctggggagattcgggaa
aacttgaatcctgtggtacagggtaacaatactataaagaagagaccagcagataaagaa
gcagagaccaatgcacacaaagctaaaaagagcaagctgacaaaaacagaaagtaaaccc
aaaggtaaccttttagctttctttaaacctaaacaaacaccgttgaaccctcccagtccg
aaattaaacccagacccaggtagtgagagctcagggtgtctaaccaatgctaaactgact
gattacacacactgcaattctacccagaccaaaaacagtgatgtgcctacggacacatgt
gtctccatggtaacagagacaaaaaatcaggatcaacaggacaaggaaactgcacctgta
gagatgtgtaggaaggggccgtgttctagcttttggaaagaggttttgcgcggaccccct
cagccgcctctctgcaagtcacacaatgagccctgtgtgctacggattgtaaaaaaggca
ggacctaatttgagccgtcagttttttgtatgtgcccgtcctcaaggccacgcttccaat
cctcaggccagatgtaacttttttgcctgggttgataaagggaagtag
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