Triplophysa rosa: 130568269 Help Entry 130568269         CDS       T09216                                  Symbol ptch1 Name (RefSeq) protein patched homolog 1   KO K06225   patched 1 Organism tros  Triplophysa rosa Pathway tros04340   Hedgehog signaling pathway Brite KEGG Orthology (KO) [BR:tros00001]  09130 Environmental Information Processing   09132 Signal transduction    04340 Hedgehog signaling pathway     130568269 (ptch1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sterol-sensing Patched DcrB Motif Other DBs NCBI-GeneID:  130568269 NCBI-ProteinID:  XP_057212999 LinkDB All DBs Position LG17:9865585..9915195 Genome browser AA seq 1486 aa AA seqDB search MASAVNVSSEQENRDPDRPRITRRNRGNYRTAAADLEYLQRPSYCDAAFALEQISEGKAT GRKAPLWLRAKFQRLLFNLGCYIQKNCGKFLVVGLLIFGAFAVGLRAANLETDVEKLWVE VGGRVNQELKYTRQKIGEEAMFSPQLMIQTPRQEGANILTVEALTQHLDSAIKASRVHVY MYNRQWKLEHLCYKSGELVTETNFVDQIIEKLHPCLIITPLDCFWEGAKLHAGSVYLPGK PSVQWTNFDPMGFIAELKKMKISVDIWEEMLIKAEVGHGYMERPCLNPSDPDCPSSAPNK NTTGHFDVARVLTGGCHGLSKKYMHWQEELIVGGTKKNDSGKLLSAQALQTMFQLMTPKQ MYEHLKGYEEVSHINWNEDKAAAILEAWQRKYSEAVQQSVSVNSSQKVLTFTTTTLEDIL KSFSDVSVIRIASGYLLMLAYACLTMLRWDCAKSQGAVGLAGVLLVTLSVAAGLGLCSLL GISFNAATTQVLPFLALGVGVDDVFLLAHAFSETGQNKRIPFEDRTGECLKRTGASVALT SISNVTAFFMAALIPIPALRAFSLQAAVVVVFNFAMVLLIFPAILSMDLYRREDRRFDIF CCFVSPCANRVIQLEPQEAYADSSTDSSCYSPPPSYSSHSFAQHTHITMQSTVQLRTEYD PRTQAYYTTAEPHSHISVQPYQPNPNRNNNNNHHGSGAGVRASPPGSSSTAGGVVSDTAS CQSPDGASSTRDLLSQFGESGLRCLEPPCSRWTFASFAEKHYAPFLLQPKTKVVVILLFL ALLVVSLYGTTRVRDGLELTDIVPRDTGEYDFIRAQFRYFSFYNMYVVTQRADYAQIQPQ LYELHQRFGSVKYVLREENGQLPCMWLHYFRDWLLGLQEAFDKDWQAGRITQGNYRNGSD DGVLAYKLLVQTGRREKPVNINLLTRQRLVNSEGIINPNAFYIYLSAWVSNDPVAYAASQ ANIRPHPPEWLQDRTDSNPVSRLNIPAAEPIEYAQLPFYLNGLRETPQFVEAIESVRAIC SNYTRQRLPSYPNGYPFLFWEQYVGLRHWLLLSISVVLACTFLVCAVFLLNPWTAGIIVL VLSLMTVELFGMMGLIGIKLSAVPVVILIASVGIGVEFTVHVALAFLTAIGDRNKRAVLA LEHMFAPVLDGAFSTLLGVLMLAGSEFDFIVRYFFAVLAILTVLGVLNGLVLLPVLLSYF GPYPEVSPVDGRSRLPTPTPEHPPPVVRFTMRPNHTTSGAGSDSSDSEYGSNTTVSGISQ ELQQYELQSNRGRSARLEEVRIATGGRQGNRQVELPAFSSYSDDSRQHQPQQQYRSTHPP SSQDAGLQSTKRYCSRDPKRDFGSGHPPPPHRPRMDAFETATEPGGRTGPNNRERPGTNR PRSHNPYTHPSHPSTGPAYCQPITTVTASASVTVAVHPGMPGQSPTYPSYPSNDSYHTSE DVYTAPHFSDPHVPFEESNDGSKTEGLELQDLEYDTLNACHTRPSS NT seq 4461 nt NT seq  +upstreamnt  +downstreamnt atggcctcggctgttaatgtctcctccgagcaggaaaacagagaccccgatcggccgagg ataacgcggagaaatagggggaactatcggaccgccgcagcggatttggagtatttgcag cggccgagttattgcgatgccgcctttgcattggagcagatatcagaggggaaggcgact gggaggaaagcaccgctgtggctgagagcaaagtttcaaagacttttgtttaatcttggc tgttacatacaaaagaactgtggaaagtttttagttgtgggccttttaatattcggagct tttgctgttggtttaagggcagctaatctggagacggacgtggagaaactctgggtagaa gtgggcggcagggtaaatcaagaactcaagtacacgcggcagaagatcggagaggaggcc atgtttagtcctcagctcatgattcagacgccgagacaggaaggtgctaacattctgacc gtggaggcgctaacgcaacacctcgactctgccattaaagccagcagagtgcacgtttac atgtataacaggcaatggaaattggaacatttatgttacaaatcaggagaactcgtcaca gaaaccaattttgttgaccagattatagagaaactgcatccatgtctgatcatcactcct ctggactgcttctgggaaggggctaaactgcatgcaggatcagtctacctccctggcaaa ccttccgtgcagtggaccaactttgatcctatgggatttattgctgagctgaagaagatg aagatttcagtggacatatgggaggagatgctgatcaaagcagaggtgggtcatggctac atggagcgcccctgcctgaacccttcagaccccgactgtccatcctcagctcccaacaag aacacaacagggcattttgacgtggctcgtgttctgactggcggctgccatgggctctcc aaaaagtacatgcactggcaggaggagcttatcgtaggcgggaccaaaaagaatgacagc ggcaaacttctgagcgcacaggcccttcagaccatgttccaactcatgaccccgaagcag atgtacgagcacttgaagggctatgaagaggtctctcacatcaactggaacgaggacaaa gcagctgccatactggaggcctggcagaggaaatactctgaggcggtccagcagagtgtg tctgtcaattcttcgcagaaggttctcacgttcaccaccaccaccttggaagacatcctc aagtccttctctgatgtcagtgtgattcgtatcgccagtggctacctcctcatgctcgcc tatgcatgtctgaccatgctgcgatgggactgtgcaaagtcccagggggccgtggggctg gccggagtattactggttactctgtctgtcgctgctggactggggctttgctctctcttg ggtatctcttttaatgccgctaccacccaggtgttgccattcctggccctcggcgtaggg gtggatgatgtcttcctattggctcacgctttcagcgagaccggccagaacaagagaatt ccattcgaggaccgcaccggtgagtgtctgaagaggactggagcaagtgtggccttgacc tccatcagtaacgtgaccgcttttttcatggccgccctcattccaatccctgcactgcga gccttctccttacaggcggcagtggtcgtggtatttaactttgctatggtgctgctcatc tttcctgccatcctcagcatggatctgtaccgcagagaggaccgccgctttgacatcttt tgctgctttgtcagcccctgcgcaaaccgggtgattcagttggagccgcaggaagcgtat gccgactcctccactgactccagctgctacagccctccaccctcctacagcagccacagt ttcgcccagcacacccacatcaccatgcaatccactgtacagctgcgtaccgagtacgac cccagaacgcaggcttactacaccacggccgagcctcattctcacatatccgtccaaccc taccagcccaaccccaaccgcaataacaacaataaccaccacggcagcggggcaggagtt agggcgagcccgccaggaagcagttctaccgccggcggtgtggtttcggacacagcatcc tgccagagccctgacggggcgagctccacgcgtgaccttctgtctcagtttggggagtca ggattgcggtgtttggagcctccgtgttcacgttggacgtttgcatcgtttgctgagaag cactacgcgccttttctgctgcagcctaagacgaaggtggtggtcattttactcttcttg gcactgttggtggtcagtctttacggaaccacgcgggtccgggatggtttggagctgacg gacatcgtgccgcgggatacgggtgaatacgacttcatccgtgcccagtttcgctacttt tccttctataacatgtacgtggtgacccaaagagcggactacgctcagattcagccgcag ctgtacgaactgcaccagcgctttggaagcgtgaagtacgtcctgcgggaggaaaacgga cagctcccgtgcatgtggctgcattacttcagagactggctgctaggtttgcaggaggcg ttcgataaggactggcaggcgggtcgcatcactcaggggaactacaggaacggctctgat gatggtgtcctggcctacaaactcctggtgcagaccggccgcagagagaaaccagtcaac atcaacctgttaaccagacagcggttggtgaactcagaaggaatcatcaacccgaatgcc ttctacatttatttatctgcctgggtgagcaatgacccggtcgcctacgctgcgtcacag gccaacatccgcccgcatcctccagagtggctccaagacaggaccgactctaatcctgtc agcagacttaacattcctgcggccgagcccatcgaatatgcacagcttcccttctacctc aacgggctccgcgagacgccacagttcgtggaggccatcgagagcgtccgcgccatctgc agcaactacactcgccagcgtctgcccagctacccgaacggctacccgttcctgttctgg gagcagtacgtaggcctgcgtcactggctcctgctgtccataagcgtcgtgttggcctgc acattcctggtgtgtgccgtctttctgctcaacccttggaccgctggaatcatagttctg gtgctgtctttgatgacggtggagctgtttggcatgatgggattgatcggcatcaagctc agcgccgtgcctgtcgtcatccttattgcttctgtgggcatcggagtggaattcaccgtt cacgtggcactggcattcctcacagccattggggacaggaacaagagagcagtcctggcg cttgagcacatgtttgccccggtgttggatggggcgttttccaccctgctgggcgtcctg atgctggcagggtcagagtttgactttatagtcaggtatttcttcgctgttttggccatc cttacggtgttgggggtcctgaatggactggtgcttctcccagtcttattgtcctacttt ggcccttatcctgaggtgtctccagtagatgggcgaagccgactacccaccccaactcca gagcatcccccaccggtggtacgcttcaccatgaggcccaatcacaccacctctggagca ggctcagactcctccgactctgaatatgggtctaatactactgtttccggcattagccag gagcttcaacagtatgagctccagtccaacagggggcgatccgctaggcttgaagaggtg cggatcgccacggggggacgacaaggaaatcgtcaagtagagctgccagccttttcttct tactcagatgactccagacagcaccaaccacagcagcaatacagatccacccatccgccc agttctcaggatgctggacttcagtcgacaaagcgatactgtagcagggaccctaagagg gactttgggagcggtcatccgcctccccctcacaggccgcgcatggatgcttttgaaact gctactgagccaggtggccgtacaggccccaacaaccgggaacgcccagggaccaatcgc ccccgttcccacaacccctacactcacccatcccatccatccacaggccccgcctactgt caacccatcactacggtgacagcctcagcctccgttacggtggctgtgcatccagggatg cccggtcagagccctacctacccgtcctacccctccaatgacagctatcacacttcagaa gatgtctacactgcccctcacttctccgaccctcacgtgccctttgaggagagcaatgac ggctcaaaaacagagggcttggagctgcaggatctggaatatgacacgctcaatgcttgc cacacaagaccctccagctga

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