Triplophysa rosa: 130568366
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Entry
130568366 CDS
T09216
Symbol
snrpd3
Name
(RefSeq) small nuclear ribonucleoprotein Sm D3
KO
K11088
small nuclear ribonucleoprotein D3
Organism
tros
Triplophysa rosa
Pathway
tros03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130568366 (snrpd3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tros03019
]
130568366 (snrpd3)
03041 Spliceosome [BR:
tros03041
]
130568366 (snrpd3)
03032 DNA replication proteins [BR:
tros03032
]
130568366 (snrpd3)
Messenger RNA biogenesis [BR:
tros03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
130568366 (snrpd3)
Spliceosome [BR:
tros03041
]
Complex A
U1 snRNP components
Sm proteins
130568366 (snrpd3)
U2 snRNP components
130568366 (snrpd3)
Complex B
U1 snRNP components
130568366 (snrpd3)
U4/U6.U5 tri-snRNP components
130568366 (snrpd3)
Complex C
U2 snRNP components
130568366 (snrpd3)
DNA replication proteins [BR:
tros03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
130568366 (snrpd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Kringle
ATP-grasp_2
Motif
Other DBs
NCBI-GeneID:
130568366
NCBI-ProteinID:
XP_057213156
LinkDB
All DBs
Position
LG17:10200468..10202139
Genome browser
AA seq
127 aa
AA seq
DB search
MSIGVPIKVLHEAEGHVVTCETNTGEVYRGKLIEAEDNMNCQMANITVTHRDGRVAQLEQ
VYIRGSKIRFLILPDMLKNAPMLKSMKNKNQAAGAGRGKAAILKAQVAARGRGRGGPGRG
NIFQKRR
NT seq
384 nt
NT seq
+upstream
nt +downstream
nt
atgtcgattggagttcccataaaagttcttcatgaagcagaggggcatgtagtcacttgt
gaaaccaacactggagaggtttacagaggcaaactgatcgaagctgaagacaacatgaac
tgccagatggcaaacattacggtcactcacagggatggccgtgtagctcagctggagcag
gtgtatattcgtggaagtaaaattaggttcctcatcttgccagatatgctcaaaaatgct
ccgatgttaaagagtatgaagaacaaaaatcaggcagctggtgctggtcggggaaaagca
gctattctcaaagctcaagtggctgccagaggccgtggacgtggaggcccgggacgaggc
aatatattccagaagagacgctag
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