Triplophysa rosa: 130568795
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Entry
130568795 CDS
T09216
Symbol
vclb
Name
(RefSeq) vinculin b isoform X1
KO
K05700
vinculin
Organism
tros
Triplophysa rosa
Pathway
tros04510
Focal adhesion
tros04517
IgSF CAM signaling
tros04518
Integrin signaling
tros04519
Cadherin signaling
tros04520
Adherens junction
tros04810
Regulation of actin cytoskeleton
tros04820
Cytoskeleton in muscle cells
tros05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
130568795 (vclb)
04518 Integrin signaling
130568795 (vclb)
04519 Cadherin signaling
130568795 (vclb)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
130568795 (vclb)
04520 Adherens junction
130568795 (vclb)
09142 Cell motility
04820 Cytoskeleton in muscle cells
130568795 (vclb)
04810 Regulation of actin cytoskeleton
130568795 (vclb)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
130568795 (vclb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tros04812
]
130568795 (vclb)
04147 Exosome [BR:
tros04147
]
130568795 (vclb)
Cytoskeleton proteins [BR:
tros04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
130568795 (vclb)
Exosome [BR:
tros04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
130568795 (vclb)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vinculin
Talin_IBS2B
CiaI
TipAS
Mob_Pre
Harpin
Motif
Other DBs
NCBI-GeneID:
130568795
NCBI-ProteinID:
XP_057213825
LinkDB
All DBs
Position
LG18:complement(1047297..1068728)
Genome browser
AA seq
1066 aa
AA seq
DB search
MPVFHTKTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKE
TVQTTEDVIMRRDMPPAFIKVENACTKLVQAAQMLKADPYSVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVESMEDLITYTKNLGPGMTKMAKMIDERQQ
ELTHQEHRVMLVNSMNTVKELLPVLISGIKIFVTTKTSQGKGVEEALKNRNFTVEKMSAE
INEIIRVLQLTSWDEDAWANKDTEAMKRALALIDSKMGQAKNWLRDPHGQPGDPGEHAIR
QILDEAGKVGELCAGKERRDIVGTAKTLGQLTEQVSELRGRGQGATPVAMQKAQQVSQGL
DVLTGKVENAARKLEAMTSSKQVIAKRIDAAQNWLADPHGGPEGEENIKALLGEARKIAD
LCEDPKERDDILRSMGEIAALTARLSELKKAGKGDTPEARALAKQIATTLQNLQSKTSKA
VANTRPAKAAVHLEGKIEQAQRWIDNPTLDDSGVGQAAIRGLVAEGRRLANALPASQRQD
LQGKCEEVDRLMAQLAELAARGEGDSPQARAIAQQLQDTLKDLKGKMQEAMTQEVSDIFS
DTTTPVKLLAVAATAPPDAPNREEVFDERAANFENHAGRLGATADKAAAVGTANKSTVEG
IQAAVKSARELTPQVISAARILLKNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTR
SLLDASEEAIKKDLDKCQVAMANHQPQMLVAGATSIARRANRILLVAKREVENSEDPKFR
EIVKAASDELTRTISPMVMDAKAVAANIQDQGLQRGFLGSGYKILGAVAKVREAFQPQEP
DFPPPPPDLESLQIQDNATPPKPPLPEGEVPPPRPPPPEEKDEEFPEQQVGEMVSEPMMV
AARQLHDEARKWSSKGNDIIGAAKRMALLMAEMSRLVRGATGNKRALIQCAKDIAKASDE
VTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISEEESEQAT
EMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgtttcacaccaaaacgatagagagtattctggagcccgtggctcagcagatc
tctcatctggtgatcatgcacgaagagggagaggtggacggtaaagccatcccggatctc
accgcgcccgtggccgccgtgcaggcggctgtcagcaacctggtccgggtgggcaaagag
acggtacagaccacagaggatgtcatcatgaggagagacatgccacccgccttcatcaag
gtagagaacgcatgcactaaactggtgcaggccgctcagatgctgaaggccgacccgtat
tctgttccagccagagattatctgatcgacggctcacgtggcattctgtccggcacttct
gacctcctgctgacctttgatgaggccgaggttcgtaaaatcatccgtgtgtgcaaaggg
attctggaatatctgactgtggctgaggtggtggaatccatggaagatctgatcacatac
accaagaacctgggaccaggcatgacaaagatggcaaagatgatcgatgagcggcagcag
gaattgactcatcaggagcacagagtcatgctggtcaactccatgaacaccgtgaaagag
ctgctgcccgttctgatctcaggcattaagatcttcgtgacgaccaagacatctcagggt
aaaggtgtagaggaagctctgaagaacaggaacttcactgtagaaaagatgagcgcagag
atcaatgagatcatccgcgtgctgcagctcacgtcctgggacgaggacgcgtgggccaat
aaggacactgaggccatgaagagagcgctggccctgatcgactcaaaaatgggtcaggcc
aagaactggttaagagatcctcatggccagccaggtgatccaggcgagcatgccatccgt
cagattctggatgaagcgggtaaagtgggtgaactctgtgctgggaaagagaggagagat
attgtgggcactgccaaaactctcggacagctgacagagcaggtctcagaactccgcggc
aggggtcagggagcgactccagtggccatgcagaaagctcagcaggtgtctcagggtttg
gatgttctgacggggaaggtggaaaacgccgctcgtaaactggaggccatgaccagctcc
aaacaagtcatagccaagaggatcgatgctgctcagaattggctggcggatcctcacggt
ggtcctgagggtgaggagaacatcaaagctctcctgggagaggcgagaaagatcgctgat
ctgtgtgaagatcctaaagagagagacgacatcctgcgcagcatgggcgagatagccgct
ctgaccgccagactctccgagctgaagaaggcaggtaaaggtgatacccctgaagctcgt
gctttggcgaagcagatcgccacaactctccaaaatcttcagtctaaaaccagcaaagcc
gtggccaacactcgaccggccaaagcagccgttcacctggaggggaaaatcgagcaagct
cagagatggatcgacaacccaaccctggacgacagcggagtcggccaggctgccattcgc
ggtctggttgccgaggggcgtcgcctggccaacgcgttgccggcgtcccagaggcaggac
ctgcagggtaaatgtgaggaggtggatcgtctgatggctcagttagccgagctggcggcc
cgtggagagggagacagtcctcaggcccgtgccatcgctcaacaactgcaggacactctg
aaagatctgaagggtaagatgcaggaggccatgacacaagaagtgtctgacatcttcagt
gacacgaccacacccgtcaaactattggctgtggcagcgaccgccccaccagacgcgccc
aatagagaagaggtgtttgacgaacgggctgcaaacttcgagaatcacgcgggtcgtctg
ggcgccacggcagacaaggcggcagcagtcggcactgctaacaagagcacggtggagggc
attcaggcggcggtgaaatcagccagagaactcacaccacaggtgatctctgcggctcgt
atcctcctgaagaaccctggaaaccaggcggcgtatgaacactttgagaccatgaagaac
cagtggatcgacaatgtagagaaaatgacgggtcttgtagatgaagccattgacaccagg
tctctgttggatgcgtcagaggaagccattaagaaagatctggacaagtgtcaggtagct
atggccaatcatcagcctcagatgctggtcgccggggcaaccagcatcgcacggcgagcc
aatcgaatcctgctggtggcgaaacgagaagtggaaaactctgaggacccgaagttccga
gaaatcgtcaaagccgcttccgacgagctcaccaggaccatctcacccatggtcatggac
gccaaagccgtggccgccaacatacaggaccaaggccttcagagaggtttcctgggctct
ggttataagattctgggtgcggtggcgaaagtgagagaggcgttccagccgcaggagcca
gacttccctcctccgcctccagatctggagagcctgcagatccaggacaacgccacccct
ccgaaaccgcccctgccggagggtgaagttcctccaccgagaccgccgccacctgaggag
aaggacgaggagttcccggagcagcaggtcggagagatggtcagcgagcccatgatggtg
gccgcccggcagctgcacgacgaggcccgcaagtggtccagcaagggtaatgacatcatc
ggcgccgccaagcgtatggctctgctcatggccgagatgtctcgactggtgcgaggcgcc
actgggaacaagagggcgctcattcagtgcgccaaagacatcgccaaagcctccgatgag
gtcacgcggctcgccaaagaggtcgccaagcagtgcacggacaaacggataagaaccaac
ctgctacaggtgtgtgagagaatcccgacgatcagcacccagctgaagattctgtccacg
gtgaaggccaccatgctgggacggaccaacatcagcgaggaggaatcggagcaggctaca
gagatgctggttcacaacgctcagaacctgatgcagtccgtgaaggagacggtgagagag
gccgaagccgcttccatcaagatccgcacggacgccggcttcactctgcgctgggtccgc
aagacaccctggtaccagtga
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integrated database retrieval system
