Triplophysa rosa: 130568805
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Entry
130568805 CDS
T09216
Symbol
vti1a
Name
(RefSeq) vesicle transport through interaction with t-SNAREs homolog 1A isoform X1
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
tros
Triplophysa rosa
Pathway
tros04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
130568805 (vti1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tros04131
]
130568805 (vti1a)
Membrane trafficking [BR:
tros04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
130568805 (vti1a)
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GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
Mer2
Sec20
Laminin_II
DUF5344
DUF1664
CAP59_mtransfer
Motif
Other DBs
NCBI-GeneID:
130568805
NCBI-ProteinID:
XP_057213839
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Position
LG18:7284300..7403066
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AA seq
224 aa
AA seq
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MSSDFETYEQDFGTLTAEITNKIGRIPKLAAEEKTQLVLNVDKQLEEVRELLEQMDLEVR
EIPIQSRGMYNSRLKSYKQEMEKLEKDFKRSRIAYSDEVRNELLREDGGSSETQLIKLRE
ERAHLLDNTERLERSSRRLDAGYQIAVETEQVGQEILTNLATDREKIQRSRDRLRETDAN
LGKSSRILTGMLRRIIQNRILVFILGAIILLTIVLALYFNLRGH
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcggattttgagacgtacgaacaggattttgggacccttacggcggaaataacc
aacaaaatcggaagaatacccaaattagccgctgaggagaagacacagctggttctaaat
gtcgacaaacagcttgaagaagtcagagagttgctggagcagatggatctggaggttcga
gagatccccattcagagcagaggcatgtacaacagccgtctgaagagctacaagcaagag
atggaaaaacttgagaaagattttaaaaggtcacgtattgcctacagtgatgaggtgcgg
aacgagctcctgagggaggacggaggctcatcggagactcagttgataaagttacgtgag
gagagagcacatctgttggacaacacagagagactggaaaggtcatctcggaggctggac
gccggctaccagatagctgtggaaaccgagcaagttggacaggagatcctcaccaacctc
gccactgaccgcgaaaagatccagaggtcccgagatcggctgagagagacggacgctaac
ctgggcaaaagctctcggatcctgaccggcatgctgagaaggatcattcaaaatcggatc
ctggtcttcatcctgggcgccatcatcctcctcaccatcgtcttggccctctatttcaat
ttgcgagggcactga
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