Triplophysa rosa: 130568898
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Entry
130568898 CDS
T09216
Symbol
sox9a
Name
(RefSeq) transcription factor SOX-9a
KO
K18435
transcription factor SOX9 (SOX group E)
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tros03000
]
130568898 (sox9a)
Transcription factors [BR:
tros03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
130568898 (sox9a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
Sox_N
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
130568898
NCBI-ProteinID:
XP_057214105
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Position
LG18:17099909..17103657
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AA seq
490 aa
AA seq
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MNLLDPYPKMTDEQEKCLSDAPSPSMSEDSAGSPCPSGSGSDTENTRPAENNLMAPDGPL
GEFKKDEEDKFPICIREAVSQVLKGYDWTLVPMPVRVNGSSKNKPHVKRPMNAFMVWAQA
ARRKLADQYPHLHNAELSKTLGKLWRLLNEGEKRPFVEEAERLRVQHKKDHPDYKYQPRR
RKSVKNGQNESEDGTEQTHISPNAIFKALQQADSPASSMGEVHSPSELSGQSQGPPTPPT
TPKTDVQPGKVDLKREARPLQEGTGRQLNIDFRDVDIGELSSDVISHIETFDVNEFDQYL
PPNGHAGVTVTNTSYPGGYSIGAPVNQAAGGNGGHSWMGKTQSGSPQNGQQHTLTPLGTG
SSREQDQPRTTHIKTEQLSPSHYSDQQGSPQHVSYGSFNVQHLQHYSTSFPSITRAQYDY
SDHQGGATSYYSHAGGQSSGLYSTFSYMSSSQRPMYTPIADSTGVPSIPPSNHSPQHWDQ
QPVYTQLSRP
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgaatctactagatccctacccgaagatgacagatgagcaagagaagtgtctgtctgat
gcccccagtccgagcatgtccgaggactcggcggggtccccgtgcccgtccggttcgggc
tccgacacagagaacacccgtccggctgaaaacaacctcatggctccggacgggccactt
ggcgagttcaagaaagatgaagaggacaagttcccgatttgcatccgcgaggcggtttct
caagtgttgaagggctacgactggaccctcgtgcctatgccggtgagagtgaatggttca
agtaaaaacaagccgcacgtgaaaagaccgatgaacgcgtttatggtttgggcacaggct
gcgcgcagaaaactggctgatcaatacccgcacctccacaacgcggaactcagcaaaact
cttggcaaactttggagattactaaacgaaggtgaaaagcgccctttcgtggaagaggct
gagcgcctcagggttcagcacaagaaagatcaccccgattacaaatatcaaccccgccgg
aggaagtctgtcaagaacgggcagaatgagtccgaggacggtaccgagcagacgcacatt
tctccaaacgcgatcttcaaagcgcttcagcaagcagactcgcccgcctccagcatggga
gaagtgcattcacccagtgagctctcaggtcagtctcaagggccgcccactccccccacc
acccctaaaactgatgtgcagccaggcaaagtggatttgaagcgtgaagcccgaccgctc
caggaaggcacaggacggcagctcaatatcgacttccgtgacgtggacattggagaactg
agcagcgatgtcatctcacacatcgagacatttgacgtcaatgagtttgaccagtacctg
ccaccaaacggccatgcaggcgtgacagtcaccaatacatcttacccgggtggctacagc
atcggtgcccctgtcaatcaagcagcagggggcaacggtggtcacagctggatggggaag
acccagagcgggagcccccaaaatgggcagcagcacaccctgaccccactggggaccggc
agctccagggaacaggaccagccgagaacaacgcacatcaagacggaacagctgagcccc
agccactacagtgatcagcagggttccccacagcatgtcagctacggctccttcaacgtc
cagcaccttcagcactacagcacttcgttcccatccattacccgtgctcagtacgactac
tctgaccaccagggtggcgccacctcctattacagccatgcagggggtcaaagctccggc
ctctattccacctttagctacatgagctccagccagaggcctatgtatacccccatcgct
gactctacaggtgtgccctcaatccccccgtcaaatcacagtccccagcattgggaccag
cagcctgtctacacgcaactctcaagaccctga
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