Triplophysa rosa: 130568959
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Entry
130568959 CDS
T09216
Symbol
efl1
Name
(RefSeq) LOW QUALITY PROTEIN: elongation factor-like GTPase 1
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
tros
Triplophysa rosa
Pathway
tros03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
130568959 (efl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tros03009
]
130568959 (efl1)
Ribosome biogenesis [BR:
tros03009
]
Eukaryotic type
Pre-60S particles
GTPases
130568959 (efl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFL1
EFG_C
EFG_III
GTP_EFTU_D2
EF-G_D2
MMR_HSR1
DUF1825
Motif
Other DBs
NCBI-GeneID:
130568959
NCBI-ProteinID:
XP_057214269
LinkDB
All DBs
Position
LG1:3374197..3450957
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AA seq
1125 aa
AA seq
DB search
MGHTSLEKIIALQKKTSSIRNLCILAHVDHGKTTLADCLVATNGIISSRLAGKLRYLDSR
EDEQIRGITMKSSAITLHYTTGENEYLINLIDSPGHVDFSSEVSTAVRLCDGAIVIVDAV
EGVCPQTQVVLRQAWLENIRPVLVINKIDRLIVELKLTSQEAFTHLQKILEQVNAVTGSL
FTSKVLEERAEKDAGAQSITTENSAGDQVYDWSAGLEETDDSDLYFSPDRGNVVFASAID
GWGFRVHQFAEMYSQKMGIRSSVLLKTLWGDFYLNTKAKRIMKGAQSKGKKPLFVQLVLD
NIWSLYDAVVTRRDKEKVEKMVTSLGLKVMPRDLRHSDPKVLLCAICSQWLPVSQAVLSM
VCEKLPSPAEMSSERAEKLMCVGARRFDSLHEKTQELKKAFLDCSADGMAPVIVFVSKMF
AVDPKALPQNKQRPLTHEEIAQRRELARQRHAERQAANQSAETPGSTDAGGASIPSAPAT
SSVTDSLCAQTETLSVKAAVEDESREHFVAFARVYSGVVRKGQKVFVLGPKYDPXLALRM
LPEDCSASDVLPAIPHMACCTVDRLYLLMGRELEELDEVPSGNVLGIGGMEEFILKSATI
STSPACPPFTPLNFEATPIVRVAVEPKHPSEMPKLVRGMRLLNQADPCVEVLIQETGEHV
LVTAGEVHLQRCLDDLRERFAKIKISASKPIIPFRETVVRPPKVDMVNEELGKQHKVAVI
HQVKEDQTKYSEGVQVDSTGLVTLTTSNKMATVGVRAIPLPEEVTHLLEDNVELIRTMEQ
LSVFAREGKTLDINQKILENIQDLKVKLESHLQGHKWRGAVERIWAFGPRRCGPNILLNN
VEGYPRPSMWQCLERERAEMATFRDFDNSIISGFQLATLAGPMCEEPLMGVCFSVETWDM
KFSTPLAQYDLFDKDSVTEPNTVNQSGSSELKDACEMDVSTSNQSRSRAEAAGSSVDCYG
PFSGQLIAAVKETCRYAFQAKPQRLMAAMYTCEIMATAEVLGRMYAVLSKREGRVLHEEM
KEGTDMFIIKAVLPVAESFGFAEEIRKRTSGLASPQLVFSHWEVISSDPSWVPTTEEEYL
HFGEKADSSNQALKYMNAVRRRKGLYVEEKIVEHAEKQRTLSKNK
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atgggacacacaagtttggagaagatcattgccctacagaagaaaacttcaagcatcagg
aatctgtgtattcttgctcatgtggatcacgggaagacgacattagcagattgcttggtt
gccacgaatggcattatatccagccggttagcaggaaagttgagatacctggacagcagg
gaagatgagcagataagaggaatcactatgaagtccagcgccattacattacattacaca
acaggagagaacgagtacctcataaatctcatcgactctcccggtcatgtggacttctct
tctgaagtgtccactgctgtcagactgtgtgatggagctatcgtcattgtcgacgccgtc
gagggagtgtgtccgcagacgcaagttgttttacgtcaggcttggctggagaacatccgt
cctgtgctcgtcatcaacaaaatcgaccgtctgatcgtggagctgaaactcacatcacaa
gaggcgttcacacacctgcagaagatactggagcaggtgaatgcggtcacgggttcgtta
ttcacctctaaagttctggaggagcgtgcagagaaagacgcaggagctcagagcatcacc
acggagaacagcgctggagatcaggtgtacgactggagcgctggtctggaagaaaccgat
gactcggatctctacttcagcccggaccggggtaacgtggtgtttgccagcgctatagac
ggatggggtttcagggtccatcagtttgcagagatgtacagtcagaagatgggcatccgc
tcctcggttctgctcaagaccctgtggggagatttctacctcaacactaaagccaaaaga
atcatgaagggagcgcagtctaaaggaaagaagccactgtttgtccagctcgtcctagat
aatatctggagtctttatgatgctgtggtcactagaagggacaaagaaaaagtggagaag
atggtgacctctctggggttaaaggtcatgcctcgagacctaagacactcggaccccaaa
gtgctgctgtgtgccatttgtagccagtggctgccggtgtctcaggctgtgctctcgatg
gtgtgtgaaaagctgcccagcccggccgagatgtcgtccgagagagcggagaagctgatg
tgcgtgggagcgcgcaggttcgattctctgcatgagaaaacgcaggagctaaaaaaagca
tttctcgattgttcggctgatgggatggcgccggtaatcgtctttgtgtcgaagatgttt
gctgtggaccccaaagctcttccacagaacaaacagaggcctttgactcatgaagagatc
gcccagagaagggaactagccaggcagcggcacgccgagagacaagcggccaatcagagc
gcagaaacccccgggtcaactgatgctggaggggcttcaatcccatcagcccctgccacc
agcagtgtcacagattctttgtgtgcacagacggagactctttctgttaaagccgcagtc
gaggacgaaagcagagaacatttcgtggccttcgcacgtgtttacagcggagtcgtcaga
aaaggtcaaaaggtgttcgtgctcggacccaaatacgacccgtagctggctctcagaatg
ctgccggaagattgctcggcgtctgatgttttgcccgccatccctcacatggcctgctgt
acggtggacagactttacctgctgatgggtcgtgagctggaagaactggatgaagttcct
tcaggaaatgttctcggtattggaggaatggaggaattcattctcaagtcggccaccatc
tccacgtctcccgcctgccctccctttacgccactcaacttcgaggccacgcccattgtc
agggtcgcggtcgagcccaagcatccaagtgagatgccgaagctggtgcgaggtatgagg
ctgctgaaccaagccgacccgtgtgtggaggtgttgattcaggagacgggcgagcatgtt
ctggtcactgcaggggaggtgcatctacaacgctgtctggatgacttgagagagaggttt
gctaaaattaagatcagcgcttccaaaccgatcattccgttccgcgagacggtggtccgg
ccacccaaggtggacatggtgaacgaggagctgggcaagcagcataaggtggcggtgatt
caccaggtcaaggaggatcaaaccaagtattccgaaggcgtccaggtggattccactggc
ctggtcacgctcaccacctctaacaagatggccaccgtcggggtccgagctattccgctt
ccagaggaagtcacccacctgctggaggacaacgtggagctcatccgcacaatggagcag
ctcagcgtgttcgcccgggagggcaagactctggacatcaaccagaaaattctggaaaac
atccaggacctgaaggtcaaactggagagccacctgcagggccacaaatggaggggtgcc
gtggagcgtatctgggcatttggtccacgccgctgcgggccaaacattcttcttaacaac
gtggagggctacccgagaccttccatgtggcagtgtttggagagagaaagggccgagatg
gccacgtttagagactttgacaacagcatcatcagtggcttccagttggccacactcgca
ggccccatgtgtgaagaaccgctgatgggcgtttgcttctcagtagagacctgggacatg
aagttttctacaccgctagctcagtatgacttgtttgataaggactcggtcacagagcca
aatacagtcaaccaaagtggaagttctgaacttaaagatgcatgtgagatggacgtgtct
acaagtaatcaaagcagaagtagagcagaggcagcggggagttcggtggactgttacggg
ccgttttccgggcagctcatcgccgctgtgaaggaaacctgtcgatacgctttccaggcc
aaacctcagcgactaatggctgccatgtacacctgtgagatcatggccactgctgaagtc
ttaggtcgtatgtatgctgttttatctaaacgggaaggacgagtcctgcatgaggagatg
aaggaagggacggacatgttcatcattaaagctgtacttcctgttgccgagagcttcgga
tttgctgaggagataagaaagaggaccagcggcctggccagtccacagctagtgttcagc
cactgggaggtgatctctagtgatccgtcctgggtgcccactacagaggaggagtattta
cactttggagaaaaagcggattcctccaaccaggctctgaaatacatgaacgctgttcgg
agacgcaagggcctgtacgtggaagagaagatcgtggaacatgcggaaaaacaacgaact
ctcagcaaaaacaaataa
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