Triplophysa rosa: 130568976
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Entry
130568976 CDS
T09216
Symbol
zfr
Name
(RefSeq) zinc finger RNA-binding protein
KO
K13203
zinc finger RNA-binding protein
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tros03041
]
130568976 (zfr)
Spliceosome [BR:
tros03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
130568976 (zfr)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DZF_N
DZF_C
zf-met
zf-C2H2_jaz
DUF4484
zf-U1
Motif
Other DBs
NCBI-GeneID:
130568976
NCBI-ProteinID:
XP_057214260
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All DBs
Position
LG2:complement(17155557..17170657)
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AA seq
1083 aa
AA seq
DB search
MIPICPVVSFTYVPSRLGEDAKMATGNYFGFTHGAAAQYSQQPAPGVAYTHPTTVASYTV
HQAPVAAHTVAAGYAPTAATVAIARPAPVSVAAAANAAAYGGYQPAHAATDYGYAQRQPE
VPPPPPPVTSQNYQDTYSYVRSTAPAVAYDSKQYYQQSAATPAVAAAAAAQPQPTVAESY
YQTAPKTGYSQGATPYAQTQQTQRQVTAIKPATPSPATSTFSIYPVSSAVQPAAAAASVV
PSYSQSPTYSTNAVTYSGTSYSGYEAAVYSAASSYYHQQQQQQQQKQAAVAAAATAAWTG
STFTKKTPFQNKTLKPKQPPKPPQIHYCDVCKISCAGPQTYKEHLEGQKHKKKEAALKVA
QTSSSSSSSSSSGGGNCARGTQNQLRCELCDVSCTGADAYAAHIRGAKHQKVVKLHTKLG
KPIPSSEPSVVSQGSSSSTAAPSKTASSLINSSTSSTTSNLSTSSSISNATYLKSVGMVT
SASQGKNPISSSVTVNSVKKVNTPKINFVGGNKLQTTAAKTDESKVDATKPAHSIVPAPT
LDMKNDTSECLSPQSALAALQSDVQPVGHDYVEEVRNDEGKVIRFHCKLCECSFNDPNAK
EMHLKGRRHRLQYKKKVNPDLQVEVKPSIRARKIQEEKMRKQMQKEEYWRRREEEERWRM
EMRHYEEDMYWRRVEEEQHHWEDRRRMPDGGYPQGPPGPPGLLGMRPGMPILQPQGPMPP
RRPDSSDDRYVMTKHAAIYPSEDELQAIQKIVSITERALKLVSDIITDQDAGAKDKEEDK
DKEKKEPPKDRLLKGVMRVGVLAKGLLLRGDKNVNLVLLCSEKPTTNLLTRIVEHLPKQL
TTVTPEKYEVKGSIQEAAIILTSCAEPKMQVTITLTSPVIREENARDGDVTSSMVKDPAD
VLDRQKCLDALAALRHAKWFQARANGLQSCVIVIRILRDLCQRVSTWSAFPSWAMELLVE
KAISSAAGPMSPGDALRRVFECISSGILQPGAPGLIDPCEKNPTDTLAALDDQQREDITL
SAQFALRLLAFRQIHKVLGMDPLPQMNPRFNVRNNRKRRRDNSDSTDGFEAEGKKDKKDY
EGF
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atgattcccatatgtccagtagtgtccttcacctatgtgcccagccggctaggtgaagat
gccaaaatggccaccggcaactattttggatttacccacggtgctgcggcgcagtacagt
cagcagccggcccctggggtagcatacacccaccccactacagtggccagctatactgtg
caccaagcaccagtggcggcacacacggtggcagcaggctatgcccctactgctgccacg
gttgccatcgccaggccagcaccagtctccgtagcagctgcagccaatgctgctgcttac
gggggataccaaccggcccatgccgccacggattacgggtatgcccagagacagccagag
gtacccccaccaccacctcctgtcacttcacaaaactaccaggacacgtattcatacgtg
cggtccacagctccggctgtagcgtatgacagtaaacaatactaccagcagtctgcagct
acaccggctgtggccgctgctgcagcagcccagccgcaacccactgttgctgaatcctac
tatcagactgcacctaaaactggatacagtcaaggcgccactccatacgcccagacccag
caaacccagcgtcaggttacagccataaagccagccactcccagtccagccacctcaacc
ttctccatttacccagtgtcctctgctgtacagcccgccgcagctgctgcctctgtagtc
ccatcttactctcagagtccaacatacagcaccaatgcagtcacatactctggaacatca
tactctggatatgaagctgctgtgtattcagccgcgtcctcctactaccaccagcagcag
cagcaacagcagcagaaacaagcagctgttgccgcagcagccactgccgcgtggaccggc
agcacttttaccaagaaaacccccttccagaataaaactctcaaacctaaacagccccct
aaaccacctcagatacactactgtgatgtctgcaagatcagctgtgccggaccccagacc
tataaggagcacttggagggccagaagcacaagaagaaggaagctgctctgaaggtagcc
cagaccagtagcagtagcagcagcagcagcagctctggaggtggaaactgcgcccgcggc
acccagaatcagctacgctgtgagctctgtgacgtctcctgtaccggggccgatgcctac
gctgcacacatcagaggagccaaacaccagaaggttgtgaaattgcacaccaaactagga
aagccgatcccatcctccgagcccagtgttgtcagccaaggctctagctccagcacagca
gctcccagtaagactgccagctccctcatcaacagctccacaagcagcacaacatctaac
ttatccacttcctcctcaatttccaatgcgacttacttaaaatccgtcggcatggtaact
tcagcttcgcagggcaagaacccaatatccagcagcgtcacggttaactctgtcaagaag
gtcaacacccccaagatcaactttgttggtggaaacaagttacagaccacggctgcaaaa
actgacgaatcgaaggttgatgcaactaaaccagcacattccattgtgcctgcgccaaca
ctggacatgaagaatgacacttctgaatgtctgtcacctcagtcagcacttgcggccctg
cagagtgacgttcagcctgttggacacgactatgttgaagaggtaaggaatgatgaagga
aaggttatccggttccactgcaaactgtgcgaatgcagtttcaacgatccaaatgcaaaa
gaaatgcatttgaagggaaggagacatcgactgcaatataagaaaaaggtgaacccagat
ctccaggtggaagtcaaacccagcatcagagcccggaagatccaagaggaaaagatgagg
aagcaaatgcagaaggaagaatactggagaagacgtgaagaagaggagcgctggaggatg
gagatgaggcactacgaggaagatatgtactggaggcgtgtggaggaggagcagcatcat
tgggaggacaggcgcagaatgcctgacggaggttatccacagggtccacctggacctccg
ggtcttctgggtatgaggcctgggatgcccattcttcagccacaaggaccaatgcctcca
cgtcgccctgattcctcagacgatcgttatgtgatgaccaaacatgcagctatttacccc
tcggaggatgagcttcaggccatccagaagatcgtgtcaatcacggagcgagcacttaag
ctagtctctgacataatcacagaccaagatgcaggtgcaaaggacaaagaggaagacaaa
gacaaagagaagaaagagcctcccaaagacaggttgctgaaaggtgtgatgagagtaggc
gttcttgccaagggcttgcttctgcgaggagacaaaaatgtcaacttggtcctcctttgt
tcggagaagcctactacaaatctgctcacccgcattgtggaacatctccccaaacagctc
acgacggtaacaccagagaaatatgaggtaaaaggttccatccaagaggctgccattatc
ctcacctcctgtgctgaacccaagatgcaggtcaccatcaccctcacctcacccgtcatc
cgagaggagaatgcccgggatggagatgtaacctcgagtatggtgaaagacccagcggac
gtcttggacaggcaaaaatgccttgacgctctggctgccctacgccacgctaagtggttc
caggctagagccaatggactccagtcatgtgtgattgtcattcgaatactgcgtgacctt
tgtcagcgggtatccacatggtctgcctttccaagctgggctatggagctgctggtggag
aaggccatcagcagtgctgctggaccaatgagccctggagatgctcttcgacgagtcttt
gaatgtatttcttcaggcatccttcagcctggtgctccaggattgatagacccctgtgag
aagaatccaacagacacactggctgcactggatgatcagcagagagaggatatcacgtta
agcgctcagtttgctttgagactgctggcgttccgtcagattcacaaagttctaggcatg
gaccccttgccccagatgaacccgcgcttcaacgtacgaaataaccgcaagagacgccgc
gacaacagtgacagtaccgatggattcgaagcagaagggaagaaagacaaaaaggattac
gaggggttctaa
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integrated database retrieval system