Triplophysa rosa: 130568987
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Entry
130568987 CDS
T09216
Name
(RefSeq) LOW QUALITY PROTEIN: WD repeat domain phosphoinositide-interacting protein 1
KO
K17908
autophagy-related protein 18
Organism
tros
Triplophysa rosa
Pathway
tros04136
Autophagy - other
tros04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
130568987
04136 Autophagy - other
130568987
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tros04131
]
130568987
03029 Mitochondrial biogenesis [BR:
tros03029
]
130568987
Membrane trafficking [BR:
tros04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
130568987
Mitochondrial biogenesis [BR:
tros03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
130568987
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_EML_2
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
CPSF_A
Beta-prop_Vps41
Beta-prop_RSE1_2nd
Beta-prop_IFT140_1st
EIF3I
BCAS3_WD40
Beta-prop_NWD2_C
RMC1_N
Motif
Other DBs
NCBI-GeneID:
130568987
NCBI-ProteinID:
XP_057214279
LinkDB
All DBs
Position
LG18:18093688..18105799
Genome browser
AA seq
428 aa
AA seq
DB search
MALQNFRDSLLCASFNQDITSLAVGGMNGYRLFSLSSVDRMDCIHQDESPDVYIAERLFS
SSLLVVVSRSTPFRMNIYHFKKGTEICNYSYSSNILAVKLNRQRLVVCLEEALYIHNVKD
MKLLKSVLNTPPNPKGLCAPSVNHSNSYLAYPGSITAGEITLYDAMNLSMVTMISAYASP
VAAISFNAPGTNLVSASEKGTVIRVFSVPEGVKLFEFRRGMKRYVSISSLSFSADGQFLC
ASSNTETVHIFKLEPHSPSKESPSWSSYMEKMFSAASTYLPSQVSDMMHQDRAFATVHLS
VSGLKNISALAIIQKVPHLLVASLDGNFYIYSLDPQEDGHCHLVKKHRLFESDDENPVVS
DLEVGSPSYASTVATTSSQDSPSSSSLTGYSEDGGAKKGELIPEHEFADGPVRLDDEQEF
PPVNFQNT
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atggctctccaaaacttcagagactcgctcctctgcgcctccttcaaccaggacataacg
tccttggctgttggcggtatgaatggctacagacttttttctctgtcctctgttgacaga
atggattgtattcatcaggacgaaagccctgatgtgtacattgccgagcggctcttctcc
agtagtctattggtggttgtgagcagatctacaccatttcgaatgaacatctaccatttt
aagaagggcacagagatctgtaactacagctactccagcaacatcctcgctgtcaaactt
aaccgtcagagacttgtagtttgtttggaggaggctctgtacatccataatgtcaaagac
atgaaacttctgaagtctgttctcaacacaccaccaaaccccaaaggcctgtgcgcacct
tctgtcaatcattccaactcatacctggcataccctgggagtatcaccgctggagaaatt
acactttatgatgctatgaatctgagtatggtgaccatgatctccgcctatgccagccct
gtggcagcaatttcattcaatgcgccaggaaccaatctggtcagcgcttcagaaaaaggc
actgttataagagttttcagcgtacccgaaggagtcaaactgtttgaattccgcagagga
atgaagaggtacgttagcatcagttccttgtcattcagtgccgatggacagtttctatgc
gcctccagtaacacagagactgttcatatctttaaactggaaccccacagtcccagtaag
gagtctccctcatggtcttcgtatatggaaaagatgttctctgctgccagcacgtacctt
ccctctcaggtgtcagacatgatgcatcaggacagagcgtttgctaccgttcatctcagt
gtgtccggcctgaagaacatatcagctctggccattatccagaaggttccacatcttttg
gtggcttccttagatggtaatttctacatatacagtttagatccccaggaagatggacac
tgtcatttagtaaaaaaacacagattgtttgagagtgacgatgaaaatccagtggtgtca
gatctggaggttggaagcccatcctatgcctcaactgttgctacaacctcaagccaagac
tctccatcctccagttcactcacaggttattctgaggatggaggtgcaaagaaaggagag
ctgatcccagaacatgagtttgcagatggaccagtccgtcttgatgacgaacaggagttt
cctccagttaactttcagaacacctga
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