Triplophysa rosa: 130569012
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Entry
130569012 CDS
T09216
Symbol
mms19
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog
KO
K15075
DNA repair/transcription protein MET18/MMS19
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tros03036
]
130569012 (mms19)
03400 DNA repair and recombination proteins [BR:
tros03400
]
130569012 (mms19)
Chromosome and associated proteins [BR:
tros03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
130569012 (mms19)
DNA repair and recombination proteins [BR:
tros03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
130569012 (mms19)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMS19_C
MMS19_N
TOR1L1_N
Adaptin_N
Sec7-like_HUS
DUF7070
Motif
Other DBs
NCBI-GeneID:
130569012
NCBI-ProteinID:
XP_057214325
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All DBs
Position
LG18:complement(21138303..21155917)
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AA seq
886 aa
AA seq
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MLAERSCVYNILINLMESREQELKGLGADFVFGFVQSVDGERDPRNLLLAFQVARNIINK
GYDLGKFVEELFEVTSCYFPIDFSPPPNDPHGITHEELVLCLRAVLSGTPRFSEFLLPLI
IEKLDSDVQSAKVDSLQTLAACGQTYSHKELAEFLPGLWSSIRREVFQTASERVESAGLS
ALGTITSCLSRSVLDSDEEDALQVFLNLVLKDCQHHLCEPDLKLVWPSAKLLQAANGASY
RASLIVTSAVIPALLEQYNNRTECAQRRTLLEVIQGFVLPTPLSRPAEGEESVLVPFQQS
LGSVVFSALVESSTGLQVTATRVLAALGQQPGLFTPPDVEKAVDHLTRLSLEEEDSQLSL
AVVECSGSLAHLHPKAFISRMIPRLKEEIFSDPATVSDGLSQSNGAVRQRCVMALASVSS
QASVVTESAPVLLQVVASAHAGSCGFSVEEVISVCISLEKIAQHTPDTEEIGQFFHDIII
PRLFGLALKAVLQSHSSPLTDEAVLSAIVPVISTACAGLKAELASHMAAQAVRLFLNGDV
SFLPENDFPSQIQLLQSHAESRGPSQLVCLLMACVCSFPRNVDIPEIDRLLVQLEELSCT
CPHVFAYTFAAKCFAGLVNKRPAGKALDAVLERVLKRISVEFENVSSTQRTQAFTLLLWV
AKALLLRYHPLSTVLTDKLFASLSDPELGSKVADGFRVLMSDSPDVLNRNCHADVRIMYR
QRFFAENSTKLVQGFNSAEQEKKSCYLKALSHIVNNLPRQVQLAELPALLPLLLEALSCP
DQGVQLSTLSCLQPVLLEPPAALNNQLEALFTRLLALTTSPAMNVKIASLRCVHALSHLP
EHMVLPFRARVLKALALPLDDIKRLVRKEAVSARGEWFLLGSPGGR
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgttggctgagcgatcatgtgtgtacaacatccttatcaatctaatggagtccagagag
caggaactcaagggtttgggggcagactttgtgtttggatttgtgcagtcggttgatgga
gaaagagatccacgcaacctcctgctggcgttccaggtggccagaaacatcattaacaag
ggttatgatcttggtaaattcgtagaggaactgtttgaagtgacatcctgctattttccg
atagactttagtcctccacccaatgatcctcatggaatcacacacgaggagctcgttctg
tgtctacgtgctgttctctccgggacgccccggttttctgagtttctgttaccactgatt
attgagaagctggattcagatgttcagagtgccaaagtggactccctgcagacgctggct
gcctgcggtcagacatatagccataaagagttggcagaattccttcctggcctttggagc
tcaatacggagggaggtgttccagacagccagtgagagggtggaatcagccggcctatcc
gctctcggcacaatcacttcctgtctttctcgttccgtgctcgattcagacgaggaggat
gctctgcaggtctttctgaacctcgtacttaaagactgtcagcaccatctctgtgagcca
gacctgaaacttgtgtggcccagtgccaaactcttgcaggccgccaatggggcctcatac
agagcgagtctgatagtgacctcggccgtcatacctgccctcctggagcagtataacaac
aggacagagtgtgcccaacggcgcacccttctggaggttatacagggtttcgttctgccc
accccgctgagccggcctgcagagggagaggagagtgttttggtgccgtttcaacagtct
ttgggtagcgtggtgttctctgcactggtggagtctagcactggtcttcaggtcacagcc
acacgtgtgcttgctgcactgggacagcagcctggcttgttcacaccgccagacgttgag
aaagctgttgatcatttgaccagactcagtctagaagaagaggatagtcaattgagtttg
gcagtggtggagtgttcaggctctctggctcatctacatcccaaagctttcatctctagg
atgattcctcggttgaaggaagagatcttctcagatccggcgactgtcagtgatggcttg
tctcagtctaatggagctgtgcgtcagcgatgcgtgatggcgttagcatccgtgtcgtct
caagctagcgtggtgaccgagagcgcccccgtgctgctgcaggttgtggcttcagcccat
gcaggtagctgcggtttctctgtggaggaagtgatctctgtatgcatcagtttggagaag
attgcacaacacacacctgacacggaggagattggtcagttcttccatgacatcatcatt
cctcgactcttcggattggctctgaaggcagttctgcagagtcacagtagtccactgaca
gatgaagccgttttgtctgcaatagttcctgtcataagcacagcctgtgctggattaaaa
gcagaattagcatcccacatggctgcacaggctgtacgtcttttcctgaatggagatgtg
tccttcctgccagagaatgactttccctcccaaatccagctgctgcagagtcatgcagaa
tccagaggtccgtctcagctggtgtgtcttctgatggcctgcgtgtgctcttttccacgc
aatgtggacattcctgagattgacaggcttcttgtccagttggaagagctgagctgtaca
tgtccgcacgtgttcgcctacacgtttgctgctaaatgtttcgctggcttggtcaacaag
aggccggcaggtaaagctttagacgctgtgctggagagagtgttaaagaggatcagcgtc
gagtttgagaacgtttcctccacacaacgaacgcaagccttcacattactactatgggtg
gctaaggccctactcttacgataccatccactatcaacagtcctgacagacaagctcttc
gcttcgttgagtgacccagaattagggtctaaggtggccgacggtttccgtgttctcatg
agcgactcgccagacgtactcaatcgcaactgtcatgccgacgtgcgcattatgtaccga
caacggttttttgcggaaaactccaccaaactggttcaaggcttcaactcggctgagcag
gaaaagaagtcttgttatttaaaagccctgtctcacattgtcaataaccttccaagacaa
gttcagctcgcagagctcccggcgttgctgccacttctgctagaggcgttgtcgtgtccg
gatcagggggtgcagttgtctacactgtcctgtttgcagccagttttgttggaacccccg
gcggccctcaacaaccagctggaggctttatttacccgcctgctggccctcaccaccagc
cctgctatgaacgtgaaaattgcgtccctccgatgtgtccatgctctgtcccacttgcct
gaacatatggtcttgccgtttcgtgctcgagtgctaaaagctcttgctcttccactggat
gacattaagaggctggtcagaaaggaggccgtgtctgccaggggagaatggtttttgctt
ggtagtcctggtggaagataa
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