Triplophysa rosa: 130569019
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Entry
130569019 CDS
T09216
Symbol
usp42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42 isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tros01002
]
130569019 (usp42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tros04121
]
130569019 (usp42)
Enzymes [BR:
tros01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
130569019 (usp42)
Peptidases and inhibitors [BR:
tros01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
130569019 (usp42)
Ubiquitin system [BR:
tros04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
130569019 (usp42)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
130569019
NCBI-ProteinID:
XP_057214333
LinkDB
All DBs
Position
LG18:14049598..14070305
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AA seq
1184 aa
AA seq
DB search
MTIVDKPPEKPDLESVRFKHSSSLTPFSCRDMESSSSSWSVGPSATDISRAKTVCMAPNI
GATVNGSNNTSLQVDRPREQVVMASGDGIAPPQKVLFPPERLCLKWNQSHRIGSGLQNLG
NTCFLNSTLQCLTYTAPLANYMLTREHSKTCHEPGFCMMCTMQNHIIQVFANSGNVIKPI
GVLNELKRIGKHFRFGSQEDAHEFLRYTVDAMQKSCLPGNKLDRQTQATTFVHQIFGGYL
RSRVKCLNCKAVSDTFDPYLDISLEIKTAQTLTKAFEQFVKPEQLDGDNAYKCSKCKKMV
TASKRFTIHRSSNVLTISLKRFANFNGGKITKDVRYTEHLDLRPFMSQSHGEPQVYALYA
VLVHSGFSCHAGHYYCYIKASNGQWYQMNDSSVSLSDIRAVLNQQAYLLFYVRSPDLKNR
SDFGQVNHTPGQSSPRPSIPLKMNGPQYTSTSFIGPQLPPHMTKNLSYVNGNGSSKDYQD
YHSSSKPKRSFCGGTKMTSGLSLSSSSASSSSSSTSLSNPIVRPMGIPDSSKRPKLTFLI
GQGKPVRPAQTQSNPNCSVSSISHTSSHTPTSSSASITTSDVPQAKQVNGTHTGAAFLVP
YGQESSEESDQENGALKNGTAEPPKITNGNGVKDGVQAHNSSSLPQLTSKTNGSNGLSEA
HGHGNGSGSAHKSQNGLPKANGFNHTDKVTGTSYVSSHKTNPSDSLNSQLGSQSSSNPPS
TDLQQCSSPPSKRNELPSDSCSQSSSAHPSNDSSVSTTDNDQAVLKVESIQNHATHTAPG
MSDLRVNHTVNRLHPGDGHTSPHKLKETRSCSEGETKESKPPHPCKLGSGDGRRSGEDHN
RLVERPHFSSSMKDRDRYRQHRDYDDRNRNRYGHSHREHRPNRERSTSRERYYRDRNEER
HWDRYTHHHREHYHYQRRPREERDRSRERRNDRIGHDAYRSSGHHSRDGVSSNRHHSRDG
VSSNGHHSRDGVSSNGHHGADGGRGREVHTVSENSSRARSPRSVSPPPGHHKRKRSLSTD
SSESSDECRVKKAKKKNRNKDKYRRSEEDPSEMNEDSSSKRHKKKKKKKKKKRWDEEKPH
TGRDSTHKRDEHESRSRNGGESRHLSSESTHSSSQDHQMEDQQQLNGHKANGLSCSSGSE
PDLCHNGLEKDVKHRNGTTVNSTKTHSHRNGDVECVFHRIPADV
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagttgacaaacctccagagaaacctgacctggagtcagtgcggttcaagcac
tccagctccctcacacctttctcctgcagagacatggagagcagtagttcgagctggagt
gttggtccctctgctacagacatttcgagggccaaaactgtttgcatggccccaaacatt
ggagcgactgtgaatggaagtaacaacacgtctctccaagttgacaggccccgggaacaa
gttgtgatggccagtggggatggcattgctcctcctcagaaggtcctctttcccccagag
cggctttgcttgaaatggaaccagagccatcgcattggatcgggtctccagaacctggga
aacacttgtttcctaaattcaaccctccagtgtttaacatacactgctccccttgctaac
tacatgctgaccagagagcattccaaaacatgtcatgagcctgggttttgcatgatgtgt
acaatgcaaaatcacatcatccaggtgtttgccaactccggaaacgtcatcaagcctatc
ggggtgcttaatgaactgaaacggattggaaagcatttccgatttggaagtcaagaagac
gcccatgagtttttgaggtatacagtggatgctatgcaaaagtcctgcctccctgggaac
aaactggacaggcaaacacaggctaccacttttgtacatcaaatatttgggggttatctg
agatccagagtcaaatgtttgaattgcaaagcagtctctgacacatttgacccttatctg
gatatttcactggagataaagaccgctcagacacttacgaaggcatttgaacagtttgtt
aagcctgagcaactggatggggataacgcttacaaatgctccaaatgtaagaaaatggtc
accgcctcaaagagattcaccattcaccgcagttctaatgttcttaccatctcactgaag
cggtttgccaactttaatggaggaaaaatcacaaaggatgtgagatacaccgagcatcta
gacttgcgtccattcatgtctcagtctcatggggagccgcaggtctatgctctgtatgct
gtgctggttcattctggtttcagttgccatgctggacattactactgctacataaaggct
agcaatgggcagtggtatcagatgaacgactcatccgtatctctcagtgatattagagca
gtgcttaaccagcaggcatacttgctgttttacgtcaggtcacctgatttgaaaaacaga
agtgactttggccaggtgaaccatacaccgggtcagtcatctccacgaccatccattcca
ctcaagatgaatggacctcagtacacctccacatccttcatcggccctcagttgccacca
catatgacgaagaatttgtcatatgtcaacggaaacggttcctcaaaggactaccaggac
taccatagtagctcaaaacccaagagaagcttttgtggtgggaccaaaatgacttctggt
ctgtctctttcatcctcctccgcatcgtcttcttcctcttccacatctctatccaacccc
atcgttcgacccatgggcattcccgactcgtctaagaggccgaagttgacgtttctcata
ggtcagggcaagcctgtgagacccgcccagacccagtcaaatcctaattgctccgtgtct
tcaatctctcacacatcctctcacactcccacatcctccagcgcctcaataactacctca
gatgtcccacaggccaagcaggtcaacggaactcacactggagctgcttttctggtccct
tatggtcaggagtcttcagaggaatctgaccaggagaatggagccttgaagaacggaaca
gctgaacctcccaagataaccaatgggaatggggtaaaggatggagtccaagcccacaat
tctagctcactgcctcagcttacctcgaagacaaacggatccaacggcttgtcggaggcg
cacgggcacggaaatggctcaggatctgcccataaatctcagaatggccttcccaaagcc
aatggttttaatcacactgataaggttacaggtacttcatatgtctcgtctcataaaact
aatccatctgatagtctgaactcgcagttgggttcgcagtcaagctccaatccaccaagt
acagaccttcaacaatgttcctcacctccaagcaaaaggaatgaacttccatcagactct
tgttctcagtcttcttctgcacatccatcaaatgactcctcggtctcgacgacggacaat
gaccaagcagtcttaaaggttgagtcgattcagaaccatgccacccatacagcacctggc
atgtcagaccttcgggtcaaccataccgtcaaccgcctccatccgggtgatggtcacacg
agcccacacaagttaaaagagacacgcagttgctcggaaggtgaaactaaagagtcaaaa
ccaccacacccatgcaagttaggatctggtgatggaagaagatcaggtgaagaccacaat
aggcttgtagagcgtccacacttttcatcctccatgaaagacagggatagatacagacaa
catagggactatgatgacaggaacaggaaccgctacgggcacagccatcgagagcatcgt
cccaacagggaacgttctaccagcagggagcgctattatagagatcgcaatgaggaacga
cactgggacaggtacacacaccaccatcgtgagcactatcattatcaaagaagacccagg
gaggaacgggatcgcagtagagagaggagaaacgataggattggacatgacgcttatcgt
tcttcaggacatcacagcagggatggggtttccagcaacaggcatcacagcagggatggg
gtttccagcaatgggcatcacagcagggatggggtttccagcaatgggcatcatggggca
gatggtggcagaggaagggaagtccatacggtcagcgaaaacagctcaagagccagatct
ccacgttctgtcagcccaccgcctgggcatcacaagaggaaacgcagcttgtcaacggat
tcaagcgaaagctcagatgagtgccgggtgaagaaagccaaaaaaaagaataggaacaaa
gacaaatacagacgctcagaggaagacccttcagagatgaatgaggacagcagctctaag
agacataagaagaagaagaaaaagaaaaagaagaagaggtgggacgaggagaagcctcac
accgggagagacagcactcataagcgggacgaacacgagtctagatcgagaaacggtgga
gaaagtcgtcatctcagctctgaatctactcacagcagcagccaagatcatcaaatggag
gaccagcaacagctcaatggacataaagcaaatggtttgagctgttccagtggaagtgaa
cctgacctctgtcacaatggactggagaaagatgtgaaacacagaaacggtaccactgtc
aacagcacaaagacacactcgcatagaaatggagatgttgagtgtgtcttccaccgaatc
cctgcagatgtttaa
DBGET
integrated database retrieval system
