Triplophysa rosa: 130569072
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Entry
130569072 CDS
T09216
Symbol
dhx8
Name
(RefSeq) ATP-dependent RNA helicase DHX8
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
tros
Triplophysa rosa
Pathway
tros03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130569072 (dhx8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tros03041
]
130569072 (dhx8)
Enzymes [BR:
tros01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
130569072 (dhx8)
Spliceosome [BR:
tros03041
]
Complex C
Other components
Step II factors
130569072 (dhx8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
HA2_N
DEAD
AAA_22
GIPC1_GH2
AAA_19
nSTAND3
AAA_16
T2SSE
TsaE
PhoH
Flavi_DEAD
Sigma54_activ_2
ABC_tran
Motif
Other DBs
NCBI-GeneID:
130569072
NCBI-ProteinID:
XP_057214423
LinkDB
All DBs
Position
LG18:9112832..9121241
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AA seq
1200 aa
AA seq
DB search
MAEIGEDELKKLEYLSLVSKVCTELDNHLGISDKDLAEFVISLAEKNPTFDGFKSVLAKN
GADFTDSLVSNLLRLIQTMRPPAKASPSKGSHPVVKPKSEKDKLKDLFPALCRPDNPITR
TLLDEDDVKVAADAMKELEMFMPSISGPDSKSSKHRSETSSSKKRRSRSRSRDRDRDRDR
DRHRRHRSRSRSRSRSNDRDRRKRRSRWHSRSKSRSPARGDRDKGSDRWKDKHVDRPPPE
EPSVGDIYNGKVTSIMQFGCFVQLEGLRKRWEGLVHISELRREGRVANVADVVSKGQRVK
IKVLSFTGSKTSLSMKDVDQDTGEDLNPNRRRNMGADGQEELAMRNPDRPTNLNLGRAPE
VEDDTLERKRLTKISDPEKWEVKQMIAANVLSKEEFPDFDDETGILPKVDDEEDEDLEIE
LVEEEPPFLRGHTKQSMDMSPVKIVKNPDGSLSQAAMMQSALAKERREVKQAQREAEMDS
IPMGLNKHWVDPLPDADGRQIAANMRGIGMMPNDIPEWKKHAFGGNKASYGKKTQLSILE
QRESLPIYKLKEQLIQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTTRGKIGCTQPRR
VAAMSVAKRVSEEYGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLGQYA
IIMLDEAHERTIHTDVLFGLLKKTVQKRTDMKLIVTSATLDAVKFSQYFYEAPIFTIPGR
TYPVEVLYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSL
GPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFV
KQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEI
QRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRM
AEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQPEG
DHLTLLAVYNSWKNNKFSSPWCYENFIQARSLRRGQDIRKQMLGIMDRHKLDVVSCGKAT
VRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLTTKE
YMREVTTIDPRWLVEFSPAFFKVSDPTRLSKQKKQQRLEPLYNRYEEPNAWRISRAFRRR
NT seq
3603 nt
NT seq
+upstream
nt +downstream
nt
atggcagagatcggagaggacgagctcaaaaagctcgaatatttgtctttggtgtctaaa
gtttgtacagagcttgacaaccatttgggaatcagcgataaggatcttgctgaatttgta
atcagtcttgctgagaaaaacccaacgttcgatggctttaaatcggttctggctaaaaac
ggggcagattttacagattcactcgtcagcaatttgcttcgtctcattcaaaccatgcgg
cctcctgcaaaagcatctcccagtaaaggctctcatccagtggtcaagccaaagagtgaa
aaggacaagctgaaggatttgtttccagctttgtgcagacctgataatcccattaccagg
actttgctggatgaggatgatgtgaaggtcgctgctgatgccatgaaggaactggagatg
tttatgcccagtattagtggaccagactcgaaaagcagcaaacacagatctgaaaccagc
agcagcaagaagaggaggagcagaagccgcagcagagatagagacagagatagagacaga
gacagacacaggcggcatcgctctcgttcccgttccaggtctcgttctaacgacagggac
cggaggaagcgcaggtcccgctggcactctcgcagcaagtcacggagtcctgcacgggga
gacagagacaagggctcagatcgctggaaggacaaacacgtggaccggcccccgccagag
gagccctccgtgggtgatatctataatggcaaagtcaccagtattatgcagtttggctgt
tttgtgcagttggaaggtcttaggaagcgctgggaaggcttggttcacatttctgaactc
aggagagagggacgggtagcaaatgtggcagatgtggttagcaaaggtcagagggtcaaa
atcaaggtgttgtcctttactgggtccaaaaccagcctcagtatgaaggatgttgaccag
gacactggtgaagatctgaaccccaacaggagaagaaatatgggtgcagatggtcaagaa
gagttggccatgaggaacccagacagacctactaacctcaacctgggccgtgctccagag
gtagaggatgacacactggaacgcaaaagactcaccaagatctctgatccagaaaagtgg
gaagtcaaacaaatgatcgctgccaatgtgttgtctaaggaggaattcccagactttgat
gacgaaacgggcattctccctaaagtagacgatgaagaggatgaggacctggagattgag
ctggtggaagaggagcctccattcctgaggggacacaccaaacaaagcatggacatgagt
cctgtcaagatagtcaagaacccagatggatctctctctcaagcagccatgatgcagagt
gccctggccaaagaacgtcgggaagtgaaacaagcccagcgggaggctgagatggactcg
atcccaatgggcctgaacaaacattgggtggacccgctgcctgatgctgacggcaggcag
atagccgccaacatgagaggcataggtatgatgcccaacgacatcccagaatggaagaaa
cacgccttcggtggcaacaaggcgtcctacggcaaaaagactcaactttcaatcctggag
caaagagagagtcttcccatctacaaactgaaggagcagctcattcaggctgtccacgac
aaccaaatcctgattgtgatcggggagacgggctcagggaagaccacgcagatcactcag
tacttggctgaggcgggatacaccacacgggggaaaatcggttgcacacaaccaagaaga
gtggcagccatgtctgtggctaaaagagtgtcggaggagtacggttgctgtttgggtcaa
gaggtgggctacaccatccgttttgaggactgcacaagtccagagacggtcatcaagtac
atgacggacggtatgctgttgagagagtgtctgatcgaccctgatctgggtcagtatgcc
atcattatgttggacgaggctcacgagagaacaatccacacagatgtgctctttgggctt
ctcaagaagaccgtacaaaagcgaacagacatgaagctcatcgtgacatcagccaccctg
gatgctgtgaaattctctcagtacttctacgaagcacctattttcaccatccctggtcgt
acatacccggtggaagtgttgtacactaaagaacccgagacggactatctggatgccagc
ctgatcacagtcatgcagatccacctcactgagcctccaggtgacatcctggtgttcctg
acgggtcaggaagagatcgacacggcttgcgagatcctctacgagcgaatgaaatctctc
ggccctgatgtcccagagctcatcatcctgcctgtgtactccgccctgcccagcgaaatg
cagaccaggatctttgatccagcaccacctggaagtagaaaggtggtcattgctaccaac
attgcggagacgtctttgaccatcgatggaatctactatgtggtggatccaggtttcgtc
aaacagaaggtttataactccaaaactggcatcgatcagctggtggtcacgccaatctca
caggctcaggctaaacagcgagcgggcagagccggtagaacaggccctggtaaatgttat
aggctatacacagaacgtgcctacagagatgagatgctcaccaccaacgtgcctgagatt
cagcgaactaacttggccagcactgtgctgtctctcaaggcaatgggcatcaatgatctg
ttgtcatttgatttcatggacgctccacccatggagacactcatcacagccatggagcag
ctgtacaccctgggagctctggatgatgaaggtctgctcacacgcctcggtcgtagaatg
gctgagtttcctttggagcccatgctttgtaagatgttgatcatgtctgtccatctcggc
tgcagtgaagagatgctgaccattgtgtcaatgctttcagtacagaatgtcttctataga
ccaaaggacaaacaagctctggcagaccagaagaaagccaagtttcaccagcctgaggga
gaccacctgactttgttggctgtctacaactcttggaagaacaataagttttccagccct
tggtgctacgaaaacttcatccaggcgcgatctctacgacgtggtcaggatatccgcaaa
cagatgctgggcatcatggacagacacaagctagatgtggtttcttgtggcaaggcaacg
gtacgtgtacagaaagcaatctgcagtggtttcttcagaaatgctgccaaaaaagatcca
caggaaggttacaggacccttatagaccagcaggtggtgtatatccacccttccagtgca
ctgtttaatcgtcaaccagaatgggtggtataccatgagcttgtgttgaccaccaaggag
tacatgagagaggtgaccactatagacccgaggtggctggtagaattctctccagctttc
ttcaaagtgtccgatccaacacgcctcagcaagcagaagaaacaacagaggttggaaccc
ctctacaaccgctacgaggaaccaaacgcctggagaatctccagagccttcaggcggcgc
tag
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