Triplophysa rosa: 130569173
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Entry
130569173 CDS
T09216
Symbol
vps35l
Name
(RefSeq) VPS35 endosomal protein-sorting factor-like isoform X1
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tros04131
]
130569173 (vps35l)
Membrane trafficking [BR:
tros04131
]
Protein recycling
Others
Retriever complex
130569173 (vps35l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
RPW8
Motif
Other DBs
NCBI-GeneID:
130569173
NCBI-ProteinID:
XP_057214609
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Position
LG18:complement(22333853..22347478)
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AA seq
963 aa
AA seq
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MASVQWHSRCRKYEYEKQMRRLEASAVDISDYHPLKAITVTDSKSRRSARKGSTSSTSSS
SSSVAPDPLSSLLDGTDPLSLFAAASVIPTIPHSISAGELGMKRKDKEEEVGSDFEPWSC
KRGEILSRFTTTEKLSINLFVGSDKSQASSPSSAVSEKVRTRLEELDDLEEGSQRELLNL
SQQDYVNRIEELNQSLKEAWGTDQKVKALKIVIQCSKLLSDTSVIQFYPSKFVLITDILD
TFGGLVYDRIWSMCAEPHPLPESFSADDVNDTAKETCLNWFFKIASIRELISRLYVEAAL
LKCNRFLTKAGIQETLQRLTAMIRGIGDPLVAVYARAYLCRVGMEVAPHLKDSLNKNFFD
LLASFRQIHGDSVQNQLALQRVEIPVYLTLYSPAIHWILQCVAYRAPEVLLTEMMERCKK
LGNNALLLNSIMWAFRAEFVATRATDFIGMIKDCDEAGFPKHLLFASLGRSLSCADPPES
ERLSVLNEAWKVITKVRSPRDYMSCAEIWVEFTCRHFTKREVNTVLADIIKHMTPDRAFE
DAYPQLESVIKKILTYFQDFSVLFSMEKFLPFLDMFQKDSVRVEVCKCIMEVFIKHQQEP
TRDPVILNALLHICKTMHDSVNALTLDDEKRALALLINGFIRMVSFGRDFEQQLSFCVEA
RATFCNLEPVIVHLIHTVNQLAMETNRVMKGSHSRKTAAFVRACAAYSFITIPSLTSIFS
RLNLYLLSGQVTLANQCLSQADAFLKAAVGILPEVPRSISIEGKQRSSEPFLLDFINNFL
STLLVVPDHPEQGVLYLVRGLLNMVQDYTWEDNSDAKVRVYISALPLLAAMSQENYLYTI
PKVDSNETLYGGDPKFIAELNKLCETLIGQVLDHLKGLGRDDGVRRQGGLAFSLFGCLLA
HGDVRNNKLNQLAANLWNLSHKHGFCDARTSVRTLEHIKLQAQQSEMTHLSDLTTRLSLQ
SRA
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atggcttctgttcaatggcactctcgctgtcgtaaatatgaatatgagaagcagatgcgt
cgtctggaggcttcagctgtggacatcagtgactatcatccactcaaagccatcacggtg
acagattctaaatctcggcgtagtgcacggaaaggcagcacatcctcaacctcgtcgtcc
tccagctccgtggctccagatccgctcagctctttgctggatgggaccgacccgctgtcc
ctctttgctgcggcgtctgtgatccccactatcccacacagcatctccgctggggagttg
ggcatgaaacgtaaagataaggaggaggaggtgggctcggactttgagccgtggtcatgt
aagcgtggagagattctgtccagattcaccaccacagagaagctctctataaacctcttc
gtgggctcagacaagagtcaagcgtccagccctagctcagccgtgtcagagaaggtgcga
acacgtctggaggagctggatgatctggaggagggctctcagagggagctgctgaatctg
tcccagcaggactatgtgaaccgcattgaagaactcaatcagtctctgaaagaggcctgg
ggtacagaccagaaggtcaaagccctgaaaattgtcatccagtgctctaagctgctgtcc
gatacgtcagtcattcagttttatcccagcaagtttgtcctcatcacagatatcctggac
acatttggtggtctggtgtatgaccggatctggtccatgtgtgccgagcctcatcctcta
ccagagtcatttagtgctgatgatgtgaatgacacggctaaagaaacatgtctcaactgg
ttctttaagatcgcctccatcagagagctcatctctcgactatatgttgaagctgcactt
ttaaagtgcaaccgctttttaaccaaagctgggattcaggagacactgcagaggttaaca
gcgatgatcagagggataggagacccgctggtggccgtatatgcacgagcgtacttgtgc
agggtggggatggaagttgctccgcacctgaaggacagtctgaataagaacttcttcgac
ctgctggcctccttccgtcagattcatggcgacagtgttcagaatcagctggcgctgcag
cgggtggagattcccgtctatctgacgctctattctcctgccatacactggatcctgcag
tgtgtggcgtacagagcaccagaggttctactgacagagatgatggagagatgcaagaag
ttaggcaacaacgctcttctgctgaactctatcatgtgggcgtttcgggctgagtttgtg
gctacgagagcaacagacttcattggcatgatcaaagactgcgatgaagcaggatttccc
aagcatctgttgtttgcgtctctgggccgcagtctgtcctgtgccgatcctcctgagagc
gagagactctctgtactcaatgaagcctggaaggtcattactaaagtgcgcagtccacgg
gattatatgagctgtgcagagatctgggtggagttcacctgccgtcacttcactaaacgg
gaggtgaacacggttctcgctgacatcatcaagcacatgactccagaccgagcgttcgag
gacgcttatccacagctggagtcggtgataaagaagatcctcacatactttcaggatttc
tctgtgctcttctctatggagaagttcctgccctttctggacatgtttcagaaagacagt
gtcagggtggaggtgtgtaaatgcatcatggaagtcttcatcaaacaccagcaggagccg
acgagagaccccgtcatactcaacgctctgctgcacatctgtaagaccatgcacgactcg
gtcaacgctttaactctagatgatgagaagagagctctggctctgctcatcaatggattt
atacggatggtgtcatttgggagagattttgagcagcagctgagtttctgcgtggaagcc
cgtgcgaccttctgtaaccttgagcccgtcatcgttcatctgatacatacggtcaatcag
ttagccatggagaccaaccgtgtgatgaagggaagtcactcccgtaagaccgctgctttt
gtcagggcatgtgctgcgtacagtttcatcacgattccctccctcacgagcatcttcagc
cgtctgaatctctatctgctctcagggcaggtaacgctggccaaccaatgtctgtctcag
gctgatgcgtttctaaaagcagccgtcggtattttgcccgaggtgccacgtagcatcagt
atcgagggtaaacagcgttcttcagagccctttctgctcgacttcatcaacaactttctc
tccacgctgctggtggtgccggatcaccccgagcagggtgtgctgtatctggtgcgagga
ctgttgaacatggtgcaggattacacctgggaggacaacagcgacgctaaagtccgtgtc
tacatcagcgctctgccgttactagcggcaatgagccaagaaaactacctttacaccatt
cctaaagtggattcaaatgaaacgctctatggaggagatcctaagtttatagcagagctc
aacaagttgtgtgagactctgatcggtcaggttctggatcatttaaaggggctggggcga
gatgatggggtgcggcggcagggtggtctggcattctctctttttggctgtctgttggct
cacggtgatgtacgcaataacaaactcaatcagttagccgccaacctctggaatctgagt
cacaaacacggcttctgcgacgcacgcacgtcggttcggacactggagcacatcaaactg
caggctcagcagtccgaaatgactcatctctctgatctgaccacacgtctgtcactgcag
tccagagcttga
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