Triplophysa rosa: 130569183
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Entry
130569183 CDS
T09216
Symbol
snapc4
Name
(RefSeq) snRNA-activating protein complex subunit 4 isoform X1
KO
K09453
snRNA-activating protein complex subunit 4
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tros03000
]
130569183 (snapc4)
03021 Transcription machinery [BR:
tros03021
]
130569183 (snapc4)
Transcription factors [BR:
tros03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
130569183 (snapc4)
Transcription machinery [BR:
tros03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
snRNA-activating protein complex (SNAPc)
130569183 (snapc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
SLIDE
Motif
Other DBs
NCBI-GeneID:
130569183
NCBI-ProteinID:
XP_057214626
LinkDB
All DBs
Position
LG2:complement(9998417..10108390)
Genome browser
AA seq
1401 aa
AA seq
DB search
MASNKLLAERDKIQKEILVLENTLRADNNITDVLPSDSGSDDESDGSGPAVVGVELDDLV
AARHRIQREIEEIENTLGVNPELVDILTESEQDSDSSNEDSDNVELDLPQNVETCLQMNL
VYQEVLKEKLDELEKLLSENRQQQKEIEAQFSGPSTSCSSSPGFPYQKLFLGYFMKPYFK
DKLTGLGPPANEETKERMSHGTMPIDELKIKRWEVWQKALLTNAVAADTIKRMLQPKLSK
LDYLNSKMSKAEDEEKEELKKQMDLIEKDIADISAMREEQLTGGRNDDHDWEKIANIDFE
GLRHAEDLKRFWQNYLHPCINKTVWKQEEIDKLRKIVQENNCCHWNRIAEALGTNRTAFM
CFQTYQRYISKTFRRKEWTKEEDQILRDLVGKMRIGNFIPYMQMSFFMVGRDASQLTYRW
TSVLDPSIKKGPWSKEEDQLLRNAVAKYGIKEWGKIRMEVAGRTDGACRDRYLDCLQENV
KKGPWSTEEVELLRQKVEKYGVGKWTKIASEIPNRVDCQCLNKWKQLNQAGQGKKRERQQ
KTVQQKAKRQKVIQHKIKPKIEITSSSEDETQRKIEYMDSDAEPEVPSDEDMPQETLNKG
YVQPDMKEWIPVNATPLVCPAGTVRTMWVNLFINEDDPNGSNSGHNSSESSICSPVTSSP
VRNTILDCFGNLKRIYVGLDATVLLNQAGNENGMIKVPVSDVKHLIQWKGASVMKKDKMK
APEEKRKRRQVRDWYSLNYELLHAITPWIGNVILPVPANKKIINEADTIGIKGSKISLLK
TPVFSFFIKALHIDAEGCKNVIKAREKRRPRISSAEFKPKTVLPNTVLAALHERKGLKSG
IKEPAELLQHPLPSQPVNPQGMITPALIHPNTLVIMQPNIQGPVQPFLLNGQNISLPPQS
PPQAIPLPLIQLTAPVQPVTTLTSSSKSLSTESSKRFRAAQRTRKPTKKAQALIEEAEAK
VSKRMTLKQNWVKQSSGVSTITLATQPINWIRTPSGLIQVTGVLSANIPGNQMLKVPDDY
PVIISTRQGTSTNPSQNPLSTPFVTASSVSTDHLMPSSSINSTPVHRGMAIQTPLSNILA
DNKSMSPQASIIVQQKDSVVHTEVLGPHFCTKTFSDAAVALHFSSLSMETVLWQHLSCSS
RHSSVSPATNNICVVPSTSVSSVPTSVSGPPDEVFMEKPQTQVFSQNICVPVTAIQSTVN
QKKPSANRPLHHVAQSDLPSDSLSFDSRLLFSDHQSKVDVWINGKGGVSLPHLEITLPYL
PPSAFSIKQLTSLLKAKQSLVTAAAKILTNELQNGRGEKEQVDATRKLVAERFATNPAYL
RLKARFLSCFTFPALLATINPSEDCGVPGLPLCNNKDEVAGKNAGRNDQPPAARTELNTS
EKALAVHFSEFHTKKRLRTVT
NT seq
4206 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgaataagttacttgccgagagagataaaatacagaaggagatcttggttctt
gagaacactctgcgtgcagataataacatcacagacgtactgccatcggacagcggtagt
gatgatgaatctgatggcagtggacctgcagttgttggagtggaacttgatgacctagtg
gccgcacgccatcggattcagagggagatagaggaaatagagaatacacttggtgtgaac
ccagaacttgttgacatcttgacagagagtgaacaggacagtgattctagtaatgaggac
agcgataatgttgagttggatcttcctcaaaatgttgagacttgcctacaaatgaatttg
gtctatcaggaggtgcttaaagaaaaactagatgagcttgagaagctcctgagtgaaaat
cggcagcaacagaaagagattgaggctcagttctctggtccatctacatcttgctcctcc
tcaccaggattcccttatcagaagctttttcttggatacttcatgaagccttatttcaaa
gacaaactcactggtctgggtcctccagcaaatgaagaaaccaaagagaggatgagtcat
ggcaccatgcccattgatgagctaaaaattaaaagatgggaggtttggcagaaggcttta
ctgaccaatgcagtagccgcagatactataaaacggatgctgcagcccaaactttcaaag
ttagattatctgaatagcaagatgtctaaagctgaagatgaggaaaaggaggagcttaaa
aaacaaatggatttgatagagaaagatattgcagatattagtgcaatgagagaagaacag
ctgacaggtggtcgcaatgatgaccacgactgggagaaaatagcgaacattgattttgaa
ggtttgcggcatgctgaagatttgaaaagattctggcaaaactatttgcacccctgcatt
aacaagacagtatggaaacaggaggaaattgataaactgagaaaaattgtacaagagaac
aactgttgtcattggaacagaattgctgaagctcttgggaccaacagaacagctttcatg
tgcttccagacgtatcagcgctacatttcaaagaccttcagaaggaaagagtggactaag
gaagaagaccagatcctaagagatcttgttggaaaaatgagaatcggcaactttatccct
tacatgcagatgtcatttttcatggtgggtcgtgatgcatcacagctgacatatcgctgg
acatctgttcttgatccctctataaagaaaggcccttggtccaaggaggaagaccagttg
ttacgaaatgctgttgctaagtatggcattaaagaatggggaaaaatcagaatggaagtg
gcaggcaggacagatggcgcttgtcgtgacagatatctagattgtcttcaagagaatgtg
aaaaagggtccttggagcacagaggaggtggaactgctaagacaaaaagttgagaaatat
ggtgttggcaagtggactaaaatagcttcagagatcccaaaccgtgttgactgccagtgc
ctgaacaagtggaagcaattaaaccaagctggtcagggcaaaaagagagaaagacaacaa
aaaacagttcaacaaaaagcaaagagacaaaaggtaatccagcataaaattaaaccgaag
attgaaatcacttcaagctcagaggatgaaacgcaaagaaaaattgaatatatggatagt
gatgctgaaccggaggtgccttcagatgaagatatgccacaggaaacacttaacaagggc
tacgtacagccagacatgaaggaatggattcctgtaaatgcaacaccgctggtttgtccc
gcaggaactgtcagaactatgtgggtaaatttattcatcaatgaagatgatccaaatgga
tctaacagtggccacaattcatctgagagcagcatctgttctccagtgacgtcgagtcca
gtccgaaacaccatcctagactgttttggaaacctaaagaggatttatgtgggtctagat
gctacagtcttgctgaaccaggctggcaatgaaaatggcatgataaaggtgcctgtgagt
gatgttaaacacttaattcaatggaagggagcctctgtaatgaaaaaggacaaaatgaaa
gctcctgaagagaaaagaaaaagaaggcaggtacgggactggtacagccttaactatgaa
ctccttcatgcaatcaccccatggattggtaacgtgatactgcctgtgccagcaaataaa
aagatcataaatgaagctgataccattggaattaaggggtcaaaaatctctctcctgaag
acaccagtgttttcattctttatcaaagctctacacattgatgctgagggttgcaagaat
gtcattaaagctcgcgaaaagagaagacccaggatatcaagtgctgaatttaaaccaaaa
acagttcttcctaacacggtgttagcggcacttcatgaaaggaaaggtttgaaaagtggg
attaaggaacctgcagaacttcttcaacatcctttaccttcgcagcctgttaaccctcag
ggaatgattacgcctgctttgattcatcccaacactcttgttattatgcagccaaacata
caagggccagtgcagccttttctgcttaatggacagaacatatctctaccaccacagtca
ccaccacaagctattcctcttccactaatacagttgacagcaccggtgcaacctgtcaca
accttaacatcaagctccaaatcactaagcacagagagctcaaaaagattcagagcggct
cagcgtacccgtaaacccacgaagaaagcacaagccctaatagaagaagctgaagctaaa
gtttccaaaagaatgacactaaaacaaaactgggtcaaacagagttctggggtatctacg
attacattggcgacacagccaataaattggattcgtacacctagtgggttgatacaggtg
actggagtgctgtctgctaatattccaggcaaccagatgttgaaagtgccagatgactac
cctgtaattatcagcactcgtcaaggcacctcaaccaatccaagtcaaaacccattatct
acaccctttgtcactgcttcctctgtctcaacagatcacctaatgccgtcttcctctata
aacagtacccctgtacacagggggatggctatccagacacctctttctaatattttagca
gataacaaaagtatgtcaccccaagcatctatcatagtgcagcagaaagattcagttgta
cacactgaagtgctcggaccccatttctgtacaaagaccttctcagatgctgctgtagct
ctgcatttttcatccttgtctatggaaaccgttttatggcaacatctgtcttgctcttca
agacattccagtgtgtctcctgctaccaacaacatttgtgttgtgccatcaacctctgtc
tcaagtgtaccaacttcggttagtgggccaccagatgaggtttttatggaaaaacctcaa
actcaagttttttctcagaatatctgtgtccctgtaacagctattcaatcaactgtcaac
caaaagaagccatctgctaacagacctcttcaccatgtagctcaatctgaccttccctct
gacagtttgagctttgatagtaggttattattttctgaccatcaatctaaagttgatgtc
tggattaatgggaaaggtggggtttcactgccacatctagagatcacgttgccttacctc
ccaccatctgcctttagtatcaaacagctaacttctttgctcaaggctaaacagtctctg
gttacagccgcggctaaaatcctaaccaatgagctgcaaaatggcagaggagaaaaagaa
caagtagatgccacccgaaaactggttgccgaacggtttgccacaaatccagcatacctg
cggttaaaagctcgtttcttgtcgtgctttacctttcctgcccttttagccactataaat
ccatcagaggattgtggggtgcctgggttacctttgtgtaacaacaaagatgaagttgcg
ggcaaaaatgcaggaagaaatgatcagccgccagctgcaaggactgagcttaacaccagt
gaaaaagcattggcagtgcatttctcagaattccacaccaaaaaaaggctacgtacagtt
acataa
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