Triplophysa rosa: 130569269
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Entry
130569269 CDS
T09216
Symbol
ush1gb
Name
(RefSeq) pre-mRNA splicing regulator USH1G
KO
K21878
Usher syndrome type-1G protein
Organism
tros
Triplophysa rosa
Pathway
tros04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
130569269 (ush1gb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tros03037
]
130569269 (ush1gb)
Cilium and associated proteins [BR:
tros03037
]
Primary cilia and associated proteins
USH complex and associated proteins
130569269 (ush1gb)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank_4
Ank
Ank_3
Ank_5
SAM_1
AGA2
Motif
Other DBs
NCBI-GeneID:
130569269
NCBI-ProteinID:
XP_057214789
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All DBs
Position
LG18:complement(1112088..1117915)
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AA seq
483 aa
AA seq
DB search
MNDKYHRAARDGHLELLKEATRKDLNAPDDDGMTPTLWAAHHGNLHALRLVVGRGGDPDK
CDIWGNTPLHLAAANCHLNCLSFLVSFGANVWCLDNYYHTPLDMAASRGHMDCVRYLDSI
AAKQITINPKLVSKLKERAFRNAEKRIKNCEKLQRRHHERMEKRFLRETSAADALDTMSY
SSFSSTLSRKIPQFNTLDSTTYSQATLQSTARGKTKIQRRLEKKKQGDGTFKISEDGRRS
VRSLSGLQLGNDVMFLKQGTYVSPRQQSNPRLNIRNMFSSKPDEDDDVDTVSRALSDPGL
YDAAYSEISTDSGRDSLFNRPGLGTMVFRRNYMTDGLFRMGRDEGSVAGSEPVGRAPNVR
LRGRLPLRSPSLDEVSVGSSLSLQERNLQDLPWEEGDLGLEEEDDEQQPSSAPLEVFLAS
QGLTDFLSVFHREQLDLDALLLCSEQDLISIHIPLGPRKKLLGACGRHSHVLDGAGDMQD
TVL
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacaaatatcaccgggcggctcgggacggccacctggagctgctgaaagaagcg
acgcgtaaagatctcaacgctccggatgatgacggaatgacgccgacgctgtgggccgcg
caccacggcaacctgcacgcgctccggctggtggtggggagaggaggagatccggacaaa
tgtgatatttggggaaacacgccccttcacctggcggcagcgaactgtcatctgaactgc
ctgtcctttctggtgtcgttcggtgcaaacgtgtggtgcttggacaactactaccacacg
ccgctggacatggcggccagcagaggtcacatggactgcgtgagatacctggactccatc
gccgccaagcagatcaccatcaaccccaaactggtcagcaaactgaaggaacgtgccttc
cgtaacgccgagaaacgcataaagaactgcgagaagctccagcgcaggcatcacgagcgc
atggagaagcgcttcttgcgagagacgtctgcagccgacgcgctagacaccatgagctac
agcagttttagcagcacgttgagccgcaagatcccacagttcaacacccttgactccacg
acgtactcgcaggcaacgcttcagtccacagcaagaggcaaaaccaaaattcagcgccgc
ctcgagaagaagaaacaaggagacgggacattcaagatatccgaagacggacggaggagc
gttcgctccctctctggtctccagctgggcaacgatgtgatgtttctgaagcagggtacg
tacgtcagcccgcggcagcagtccaaccccagactcaacatccgtaacatgttttccagt
aaaccggatgaagatgatgacgtcgacacggtttcccgagcgctcagtgaccccggtctg
tatgacgctgcatactctgaaattagcacagactcggggcgggactctctgtttaaccgg
ccgggactcggcactatggtgttccgccggaattacatgaccgatgggctgttccgcatg
ggacgggatgaaggcagcgtggccgggagcgagccagtgggacgggcacccaacgtccgg
ttacgagggagattgccactcagatcacccagtctagatgaggtcagcgtcggcagctcg
ctgagtctccaggagagaaacttacaggatttgccgtgggaggaaggagatctgggtctg
gaggaggaggatgatgaacagcagccttcgtcggcacctttggaagtgtttttggcatct
caaggtctgactgattttctctccgtcttccatcgggagcaactggacttggatgcgctg
ctcctgtgttcggagcaggacctcatcagcattcacattcctctaggaccccgcaaaaaa
ctgctgggcgcatgcggcagacacagtcacgtgctggacggagcaggtgacatgcaggac
actgtgctgtga
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