Triplophysa rosa: 130569606
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Entry
130569606 CDS
T09216
Symbol
gspt1
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A
KO
K03267
peptide chain release factor subunit 3
Organism
tros
Triplophysa rosa
Pathway
tros03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
130569606 (gspt1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tros03019
]
130569606 (gspt1)
03012 Translation factors [BR:
tros03012
]
130569606 (gspt1)
Messenger RNA biogenesis [BR:
tros03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
130569606 (gspt1)
Translation factors [BR:
tros03012
]
Eukaryotic type
Release factors
130569606 (gspt1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
PAM2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
130569606
NCBI-ProteinID:
XP_057215326
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Position
LG18:13013842..13021416
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AA seq
564 aa
AA seq
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MDSRDTAPDSWEQEDDVEATAETELQSAFTGLNVNAPEFVPSFLSRGPAENATSDGTDGV
ASMEISEPAAAVENGETDASTVETWEQKGEPDEEEPGGGTLAVTGCCGDEAQDEMMEEDE
EMPTPKLPPPPPDAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYEREAKE
KNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQ
ADLAVLVISGRKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSLDRYE
ECKEKLVPFLKKVGFNPKKDIHFMPCSGMTGANLKEPSDMCPWYTGLPFISHLDSMPYFN
RSSDGPIRLPIVDKYKDMGTVVLGKLESGSICKAQQLIMMPNRHMVEVLILLSDDVETEY
AGPGENLKLRLKGIEEEEILPGFLLCNAENLCHSGRTFDAQIVIIEHKSIICPGYNAVLH
IHTCIEEVQITALICLVDKKTGEKSKTRPRFVKQDQVCIARLRAAGTICLETFKDFPQMG
RFTLRDEGKTIAIGKVLKLVPEKD
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggactcgagagacacagcccctgattcctgggaacaggaggacgatgtcgaggccacg
gcggagactgaacttcagtccgctttcaccgggctcaacgtgaacgcgccggagttcgtc
ccgtcctttctgtcccggggtccagcggaaaacgccacgtctgatggaacagatggagtg
gccagtatggagatctcagaaccagcggctgcagtggagaacggagagacagatgccagc
acggtggagacgtgggagcagaaaggagagccggatgaggaggaaccggggggtggaacc
ctagcagtgactggatgctgtggggacgaggcacaggatgaaatgatggaggaggatgag
gaaatgcccacccccaaactgcctccacctccaccggacgctcccaagaaagaacatgtt
aatgttgtgttcatcggacatgttgatgcagggaagtcaacaattggcgggcagatcatg
tatctaactggcatggtggacaaaaggacactcgaaaaatatgaacgggaggcaaaagag
aagaacagagagacctggtatctctcctgggctttagacacaaaccaagaggaaagagac
aaagggaaaacagtagaagttggaagagcctactttgaaacagagaaaaagcactttact
attcttgacgccccaggccataaaagttttgtacccaacatgattgggggggcgtcccaa
gctgatttggcagtactggtcatctctggcagaaagggggagtttgagactggttttgag
aagggaggtcagacgagggagcatgcaatgctggccaaaacagctggagttaaacacctg
atagtcctcatcaacaaaatggatgatcccactgtgaactggagcttagatagatatgag
gaatgtaaggagaagttagtgccatttctgaagaaggtgggctttaatccaaagaaagat
attcacttcatgccctgctctgggatgacgggagccaacctgaaggaaccttctgatatg
tgcccatggtatacgggattaccatttatttcacatctggacagtatgccatacttcaac
agatcaagtgatggtcccatcagattgcctattgtagacaaatacaaggacatgggaacc
gtagtgcttgggaaattggagtcaggaagtatctgcaaagcacaacaacttattatgatg
ccaaataggcacatggtagaggtgttgattctgctctctgatgatgtggagacagagtac
gccgggcctggtgaaaacttaaagcttcggctcaaaggcatagaggaggaagagattctc
ccaggctttctcctatgcaatgctgagaacctctgccactcggggcgcactttcgatgct
cagattgtcattattgaacacaaatccattatatgcccaggttacaatgcagtactacac
attcatacctgcatagaagaagtgcagataacagccttaatctgtctggtggacaagaag
acgggagaaaagagcaagactcgtccacgctttgtcaaacaagaccaagtatgcatcgcc
cgtcttagggctgcaggaactatctgcttagagacttttaaagactttcctcagatggga
cgttttactttgagagatgagggtaagacaatcgcaatcggcaaggtgctgaagttggta
cccgagaaggactaa
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