Triplophysa rosa: 130569801
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Entry
130569801 CDS
T09216
Symbol
cadm1a
Name
(RefSeq) cell adhesion molecule 1a isoform X1
KO
K06781
cell adhesion molecule 1
Organism
tros
Triplophysa rosa
Pathway
tros04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
130569801 (cadm1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tros04515
]
130569801 (cadm1a)
Cell adhesion molecules [BR:
tros04515
]
Immunoglobulin superfamily
Nectin family
130569801 (cadm1a)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
V-set
C2-set_2
Ig_5
C1-set
C2-set_3
Ig_C17orf99
Syndecan
Motif
Other DBs
NCBI-GeneID:
130569801
NCBI-ProteinID:
XP_057215663
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Position
LG19:complement(11989319..12258669)
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AA seq
441 aa
AA seq
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MANTSNGSLATLLLLFTISAAIHTGAAQFAVQSQNLVADNVSVVEGETAIISCRVKNNDD
SVIQLLNPNRQTIYFKDVRPLKDARFQLVNFSENELRVALSNVSLSDEGRYVCQLYTDPP
QEAYADITVLIPPGNPIIESREDIVSEGNETEITCTSIGSKPAATIRWMKGDKELPGRSK
VEVTYDRMYTVTSWLKLTVAREDDGVPVVCIVDHPAVKDFQAQKYLEVLYKPEVKIVVEF
PVGLTREGENLELTCQIKGKPEPQQVNWVKVDDDVPSHAVITGPDLFIENLNKSYNGTYR
CVASNSVGESYDDYILYVYDALTTTLKPTTTTTTTTISATTSPPDIIQDAAPSTEAAAHD
SRAGAEAQRSVDHAVIGGVVAVVVFAMLCLLIVLGRYFARHKGTYFTHEAKGADDAADAD
TAIINAEGGHNNSDEKKEYYI
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacacgagcaacggatctctcgctactctcctccttttattcaccatttcagca
gctatccatacaggagctgctcagtttgcagtacaaagccagaacctcgtagcggacaac
gtgtcggtggtggagggagagacagccatcatcagctgtcgagtcaaaaacaacgacgac
tccgtcatccagctcctcaaccccaacagacagaccatctacttcaaggacgtcagacct
ctgaaggatgctcgattccaactggtcaacttttcagagaacgagctgcgtgtggcgctg
tccaacgtgtccctgtcagatgagggaagatacgtgtgccagctgtatacggacccccca
caggaggcctacgccgacatcactgtgctaatcccaccaggaaacccaatcatagagtcc
cgcgaggacatcgtcagtgaaggaaacgagacagagatcacctgcacctccataggcagc
aaacccgccgccaccatcagatggatgaagggagacaaagagctgccggggaggtctaaa
gtggaggtcacgtatgaccggatgtacactgtgactagctggctaaagttaactgtcgca
agagaagatgatggagttcctgtggtttgcattgtggaccatccagcggtcaaggacttc
caggcacagaagtacttggaagtactatataaacccgaggtgaagattgtggtggagttt
ccggtgggtctcaccagggagggcgagaacctggaactcacgtgtcagattaaaggcaaa
ccagagcctcaacaggtgaattgggtgaaggtggatgacgacgtgccctctcatgccgtt
atcacgggcccagatctcttcatcgagaacttgaacaagtcgtacaacggcacttaccga
tgtgtggcctccaactcggtgggcgaatcgtatgatgactacatcctttatgtgtatgat
gcccttaccacaacccttaaacccacaaccaccaccaccaccaccaccatctctgccaca
acctcccctccagacatcatacaagacgctgcgcccagcaccgaagcagcagctcacgac
tcgcgagcaggagcagaagcacagagatccgtggaccacgcggttatcggaggggtggtg
gccgtcgtggtcttcgccatgttgtgtctcctcatcgttttgggccgatatttcgcaaga
cacaaaggcacctactttacgcacgaagccaagggggcggacgacgcggcggatgccgac
acggccatcatcaacgccgaagggggtcacaacaactcggacgagaaaaaagagtactac
atctga
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