KEGG   Triplophysa rosa: 130569805
Entry
130569805         CDS       T09216                                 
Symbol
nup188
Name
(RefSeq) nucleoporin NUP188
  KO
K14311  nuclear pore complex protein Nup188
Organism
tros  Triplophysa rosa
Pathway
tros03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:tros00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    130569805 (nup188)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tros03019]
    130569805 (nup188)
Messenger RNA biogenesis [BR:tros03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     130569805 (nup188)
SSDB
Motif
Pfam: Nup188_N-subdom_III Nup188_N Nup188_SH3-like
Other DBs
NCBI-GeneID: 130569805
NCBI-ProteinID: XP_057215670
LinkDB
Position
LG19:complement(20269569..20280616)
AA seq 1730 aa
MADSEMCVRSSRELWTILLGRSALREPGQIETELNRNWERILQGLSYYKPPSTSAADKLK
ADKDTPQTLKDFGLRISKLLGLDEQQSVQILQCYLQEDYRGTRNTLKAVLQDERQSQALL
LKIGDYYYEERLCVLRCVLHLLTYFQDERHPYRAEYSNCVSKLEKDLVSSYRKQFESLSR
SEAPTWETHGNLMMDRQVSRWFVQCLKEQAVLLEIMFLYYAYFEMPPNDLLIFTRLFKEQ
GFGQRQTNRHLADKSMDALVERIGYFSSLILVEGMDVDFLHKCALEDRTEQHQFYDQRDV
CKEVDQMLLTFGDISHHGPVMLAWVLLRHTLRPEEVGSVIRRLGHTTLQLEVFQYLTNML
QAYGSTGNNCTASTARMCIYGLLSFVITSFEEDTLGSQQHLINAACEVLAAPSLAELFWE
SKPNMGLGVILDSAVGVFPYKTGPLLQLLTGLLSDKSTAKKVYTFLDKMSFYTEAYKHKP
NDVISREDGTLWRRQTPKLLYPLGVGQTNLRMPQGCFGQVCEDKQLSVGEQGFLVRWEYS
YSSWTLFTCEIEMLLHVVSTADVLAHCERVKPILDLVHKIISTDWTVSDCLLPLTSRIYM
LLQRLTSVINPPVDVITSCVNCLIALAARQPGKVWSSLHHTGFLPFASSPLTDMAQTVSA
EGMKAGNYGNLLVLIEQPRGEYGVTIAFLRLVTTLVKGQLGSTQSRGLIPCVLLVLKEML
PTYHKWRYNTYGVRERIGCLILELVHAILNLNQEGESEGSAPSLQSLCIYSLANTEAGQA
MVSIMGVGVDTINMVLAAQPSSGGSEGPGQVLIQTVKLAFSVTNNVIRLKPQSDTASPLE
QALTRHGGHGNNLIAVLAKYIYHKHDPALPRLAIQLLKRLATVAPMSVYACLGSDAAAIR
DAFLTRLQSRTEDMRIKVTILEFLTVAVETQPGLIELFLNLETKDGSDGAKEFSLGEWSC
LSVVLELLDSKQQGKYWCPPLLQRAALAFLHALWQDRRESALSVLRTKEKFWENLTAPLF
GNLPPPSETTEPCVLESCAFVMKIIGLEIYYVVSGVLDPSLKAALESFSSKRRYEFWSDY
VRDLVCLACDGEEEGLRSLSESQMLISAWRALLILSTSHREVMHLKDDSVRQKLFMDVLE
GTKAALLMSQSVFCLRLGSMMVTLLLVLLKQWKSVLISAPALLPPLSLMLESVLHAEQQL
MDRTKAKLLSALILALQIQGLNGGEITQLPQLLLCVCEMVQDEALALIDSTRHMIQRGDI
QEDSMETDSPVQKDQRDSVCVLALHLSKELCRADEDGEQWLQVVRKLPVLPSALSALELS
LRSKQNLYFTEAALHLLLTLARTPQGAAAVAGAGAIQSICLPLLSVYEGPANGATQAFVR
KSQDAPSWPGVYRLSLSLMESLLKTLRYNFINEALDFVGVHQERILQCLNAVRTVQSLAC
LDEADHTVGFLLQLSNFCKEWHFHLPQLLRDVQVNLCYLCQTCTYLLHSKKMLHHYLQAK
NGEGLPQGPHPQRAAQLASKEQVSGEREEAESKALQAVQCSLLKILSKTLATLQHFTPDC
CQILLDQSMDLAEYRTLFVLSFSTPAFDSDVAPSFGTLLATINVALSMLGEIEKNKEPVV
SSEDTQALKSLLMFSMENCFYVLISQAVRCLKDPSVLPRDKQRLKQELSSELSTLLSTLF
RYFRRGSPNSPAGLLPSPQTKLPTPGSKGTPEGQEPFIQLVQAFVRHVQR
NT seq 5193 nt   +upstreamnt  +downstreamnt
atggcggactcggagatgtgtgtcaggagcagtcgagaattgtggacgatcttgcttggg
agatctgcactcagagaaccaggccaaatcgaaacagaattgaatcggaactgggagaga
attctgcagggtctgtcctactacaaaccacccagcacgtcggccgcagacaaactgaag
gctgataaagacacaccgcagactctcaaagactttggactaagaatcagtaaactgctg
ggtttggatgaacagcagagtgttcagattcttcagtgttacctccaagaagactacaga
gggactcgaaacacactcaaggctgtgctacaggatgagagacagagtcaagccctgttg
ctgaagataggtgattattactatgaagagagactgtgtgtgctacgctgcgtgcttcac
ctcctcacttacttccaggatgagagacatccgtacagggcggagtactcaaactgtgtg
agtaaactggagaaagatctggtgtccagctacaggaagcagtttgagtctctgtccaga
tcagaagcgccgacatgggagacgcatggaaatctgatgatggacaggcaggtgtcacgc
tggttcgttcagtgtctgaaagagcaggccgtgctgctggagattatgttcctgtattac
gcctatttcgagatgccgcccaatgaccttttgatcttcacgcgcctgtttaaggagcag
ggttttggacagcgccagacaaatcgacaccttgcggacaagagcatggacgcgcttgtt
gaacgcattgggtattttagctctctgattctcgtggaggggatggatgttgacttcctg
cataaatgtgctctggaggaccgaaccgaacagcatcagttttatgaccagcgggatgtt
tgcaaggaggtggatcagatgcttttgacgttcggtgacatctctcatcacggcccagtt
atgttggcctgggttctgctgcgacacacactgcgtccagaggaggtgggctcggtgatc
agacgtctgggacacaccacgctgcagctcgaggtctttcagtatctcacgaacatgctg
caggcgtatggcagcacgggaaataattgcacagccagcactgcacgcatgtgtatttat
ggcctcttgtcttttgtcatcacgtcttttgaggaagacacacttggcagccaacagcac
ttgatcaacgccgcgtgtgaagtcctcgctgctccgagtctggctgaactgttctgggag
tcgaagccgaacatggggctgggtgtgattttggacagcgccgtgggtgtgtttccatat
aagaccggacctctgctacagctgctcacaggcctgctgtctgacaaatctactgctaaa
aaggtgtacaccttcttagataagatgtccttctacactgaggcttataagcacaaaccc
aacgacgtgatctccagagaggacgggactctgtggaggagacagactcccaaactgctc
tatcctctgggtgtggggcagacgaacttgaggatgcctcagggctgtttcgggcaggtg
tgtgaagataagcagctgtctgtaggtgaacagggtttcctggtgcgctgggaatattcg
tacagctcctggactctcttcacctgtgagatagagatgctgctgcatgtcgtctctaca
gcagatgttctggcacactgtgagcgagtcaaacccatcttggatctggttcataagatc
atcagcaccgattggacagtttctgactgtctgctgcctcttacttcacggatctacatg
ctgctgcagaggttgacctctgtcattaaccccccagttgatgtcatcacttcctgtgtc
aactgcctgatcgctctggccgctcggcagcctggaaaggtctggtccagtctgcatcat
actggtttccttccctttgcctccagccctctgaccgacatggcacagaccgtcagtgca
gagggcatgaaggctggtaactacggcaacctgctggttttgatagaacagcccagagga
gagtacggcgtgaccatcgccttcctgagattggtgaccacactggtcaagggtcagctg
ggcagcactcagagcagaggactcatcccctgtgtgctgctggtcctgaaggaaatgctg
cccacttatcataagtggcgctacaacacgtatggagtccgagagaggatcgggtgtctc
attctagagctggttcatgctattctcaatctgaatcaggagggggagtcagagggcagt
gcccccagtcttcagtcgctgtgtatttatagtctggccaacacagaggctgggcaggcc
atggtcagcatcatgggtgtgggagtggacaccatcaacatggtgctagcagcacagccc
agcagcggtggttctgagggacctggtcaggttctgatccagactgtgaagttggcattt
tctgtcaccaataatgtgatcagactcaaaccccagtctgacacggcatcacccctggag
caagccctgacacggcacggtggtcatggcaacaacctgatcgctgtgctggccaagtat
atttaccacaagcatgacccggcactgccccgactcgccatacagctgctgaagagactc
gccacggtggctcccatgtccgtgtacgcatgtctgggcagcgatgccgctgctatcaga
gatgcattcctgacacgcctgcagagccggactgaagacatgcgcattaaagtcaccata
ctggagttcctcactgttgctgtggaaacgcaacctggactcattgagctcttccttaac
ctggagaccaaagatggcagcgatggggcgaaggagttttctctgggagaatggagttgt
ttgtcagtggtgttggagttgttggactctaagcagcaggggaagtattggtgtcctcca
ctcctgcagagggcagcgctggccttcctccacgcgctctggcaggaccgacgcgagagc
gccctctctgtgctcaggaccaaagagaaattctgggagaatctcacagctcctttattt
ggaaacttgcctcccccttctgagaccactgagccgtgtgttctggagtcttgtgctttt
gtgatgaagataattggtcttgagatctactatgttgtcagtggtgtgttggatccgtct
ctgaaagcagctctggagagttttagtagcaagcgccgctatgagttctggtcggattat
gttcgtgatctggtgtgtttggcgtgtgatggtgaggaggaaggtctgcgctctctctcg
gagtctcagatgctcatatctgcctggagggccctgttgatactctccaccagtcaccgt
gaggtgatgcatttaaaggacgattctgttagacagaagctcttcatggatgttttggaa
ggaaccaaagcagcactgctgatgtctcagtctgtcttctgtctgcgtctgggctctatg
atggtcacactactcctcgtcctcctcaaacagtggaaaagtgtgctgatatctgctcca
gctctgctccctcctctgtctctgatgttggaaagcgtcctgcacgctgaacaacagctc
atggaccgaaccaaagccaaactgctgtctgccctcatcttagccctgcagatacaggga
ctcaacggaggagagattacccagctgccacagctgctgttgtgcgtgtgtgagatggtt
caggacgaggcgctggcattgattgacagcacacgtcacatgatccagaggggagacatt
caggaagacagtatggagacagacagccctgtccagaaagaccagcgagactcagtgtgc
gtgttagctcttcacctgtctaaagagttgtgtcgggcagatgaggatggtgaacagtgg
ctgcaggtggtgaggaagctgccggttctgccatcggctctgagcgctttagaactgagc
ctgcgctccaaacagaacctctacttcactgaggccgcactgcacctgctgctcacgctc
gccagaacaccacagggtgcagcagcggtggccggtgcaggagctattcagagcatctgt
ctccctctcctcagtgtgtatgagggtccagctaatggagcaacacaggcgtttgtgcgt
aagtctcaggatgctcccagctggccgggtgtgtacaggttgagtttatctttgatggaa
agtttgctaaaaacacttcgttacaacttcatcaatgaagcgctggactttgtgggggtg
caccaggagcgcatactgcagtgtctgaacgcggtgaggacggttcagtctctggcatgt
ctagatgaagctgatcacactgtgggcttcctgctccagctctctaacttctgcaaagaa
tggcactttcacctgccacagctgctcagagacgtacaggtgaatctgtgttatctgtgc
cagacgtgtacgtatctcctccacagcaagaaaatgcttcatcattacttgcaggcaaag
aatggggaggggcttccccagggaccacacccccagcgtgcagcacagctcgcctcaaaa
gagcaggtgagcggtgaaagagaagaggcggagtctaaagccctgcaggcggttcagtgc
agcctgttaaagattctcagcaaaacactggcgacgctacaacacttcacaccagactgc
tgtcagatattattggaccagtccatggaccttgcggagtacagaactctctttgtgtta
agtttctcgactcctgcttttgattctgatgtggcgccgtcatttggaacactgctggca
actattaatgtggctctgagcatgctgggagagattgaaaagaacaaagaaccagttgtt
tcatctgaagacacacaagctctgaagtcattgttgatgttctcgatggagaactgcttt
tatgtgttgatctctcaggcggttcgctgtttgaaggatccttcagttctgcccagagac
aaacagagactcaaacaggagctcagctctgagctgagtacactgttgtcaacgctattc
cggtatttccgacgaggttcccccaactcacccgccgggctgcttccttcaccacaaacc
aaactacccacgccaggatccaagggcacgccagagggacaggagccgtttattcagctg
gtccaagctttcgtccggcacgttcaacgctag

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